RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 PLPPR5Q32ZL2 321 aa11.66□□□□□ -0.54
COL6A6-203ENST00000511332 NDUFAF6Q330K2 333 aa11.66□□□□□ -0.54
COL6A6-203ENST00000511332 C4orf17Q53FE4 359 aa11.66□□□□□ -0.54
COL6A6-203ENST00000511332 MRPL2Q5T653 305 aaKnown RBP11.66□□□□□ -0.54
COL6A6-203ENST00000511332 INTS11Q5TA45 600 aaKnown RBP11.66□□□□□ -0.54
COL6A6-203ENST00000511332 VASNQ6EMK4 673 aa11.66□□□□□ -0.54
COL6A6-203ENST00000511332 CBLN3Q6UW01 205 aa11.66□□□□□ -0.54
COL6A6-203ENST00000511332 ARSKQ6UWY0 536 aa11.66□□□□□ -0.54
COL6A6-203ENST00000511332 HMGN2P46Q86SG4 172 aa11.66□□□□□ -0.54
COL6A6-203ENST00000511332 PTOV1Q86YD1 416 aa11.66□□□□□ -0.54
COL6A6-203ENST00000511332 ZZZ3Q8IYH5 903 aa11.66□□□□□ -0.54
COL6A6-203ENST00000511332 ZNF440Q8IYI8 595 aa11.66□□□□□ -0.54
COL6A6-203ENST00000511332 BHLHE22Q8NFJ8 381 aaPredicted RBP11.66□□□□□ -0.54
COL6A6-203ENST00000511332 OR5W2Q8NH69 310 aa11.66□□□□□ -0.54
COL6A6-203ENST00000511332 ABTB1Q969K4 478 aaPredicted RBP11.66□□□□□ -0.54
COL6A6-203ENST00000511332 ARSGQ96EG1 525 aa11.66□□□□□ -0.54
COL6A6-203ENST00000511332 REXO5Q96IC2 774 aaKnown RBP11.66□□□□□ -0.54
COL6A6-203ENST00000511332 TP63Q9H3D4 680 aaPredicted RBP11.66□□□□□ -0.54
COL6A6-203ENST00000511332 MED17Q9NVC6 651 aa11.66□□□□□ -0.54
COL6A6-203ENST00000511332 STOML1Q9UBI4 398 aa11.66□□□□□ -0.54
COL6A6-203ENST00000511332 ZNF232Q9UNY5 417 aa11.66□□□□□ -0.54
COL6A6-203ENST00000511332 RPH3AQ9Y2J0 694 aaPredicted RBP11.66□□□□□ -0.54
COL6A6-203ENST00000511332 SLC6A5Q9Y345 797 aa11.66□□□□□ -0.54
COL6A6-203ENST00000511332 CDHR4A6H8M9 788 aa11.65□□□□□ -0.54
COL6A6-203ENST00000511332 PRORSD1PA6NEY8 169 aa11.65□□□□□ -0.54
COL6A6-203ENST00000511332 FAM220BPB1ANY3 271 aa11.65□□□□□ -0.54
COL6A6-203ENST00000511332 OIP5O43482 229 aa11.65□□□□□ -0.54
COL6A6-203ENST00000511332 SERPINB7O75635 380 aa11.65□□□□□ -0.54
COL6A6-203ENST00000511332 GABRA1P14867 456 aa11.65□□□□□ -0.54
COL6A6-203ENST00000511332 BMP7P18075 431 aa11.65□□□□□ -0.54
COL6A6-203ENST00000511332 PGCP20142 388 aa11.65□□□□□ -0.54
COL6A6-203ENST00000511332 TCEA1P23193 301 aaKnown RBP11.65□□□□□ -0.54
COL6A6-203ENST00000511332 ELK4P28324 431 aa11.65□□□□□ -0.54
COL6A6-203ENST00000511332 PRKAR1BP31321 381 aa11.65□□□□□ -0.54
COL6A6-203ENST00000511332 MNAT1P51948 309 aa11.65□□□□□ -0.54
COL6A6-203ENST00000511332 PER3P56645 1201 aa11.65□□□□□ -0.54
COL6A6-203ENST00000511332 KRT72Q14CN4 511 aa11.65□□□□□ -0.54
COL6A6-203ENST00000511332 SF3B4Q15427 424 aaKnown RBP eCLIP11.65□□□□□ -0.54
COL6A6-203ENST00000511332 C3AR1Q16581 482 aa11.65□□□□□ -0.54
COL6A6-203ENST00000511332 VMACQ2NL98 169 aa11.65□□□□□ -0.54
COL6A6-203ENST00000511332 ZNF311Q5JNZ3 666 aa11.65□□□□□ -0.54
COL6A6-203ENST00000511332 C1QL3Q5VWW1 255 aa11.65□□□□□ -0.54
COL6A6-203ENST00000511332 MTFR2Q6P444 385 aa11.65□□□□□ -0.54
COL6A6-203ENST00000511332 ZNF836Q6ZNA1 936 aa11.65□□□□□ -0.54
COL6A6-203ENST00000511332 CALHM3Q86XJ0 350 aa11.65□□□□□ -0.54
COL6A6-203ENST00000511332 GTPBP8Q8N3Z3 284 aaPredicted RBP11.65□□□□□ -0.54
COL6A6-203ENST00000511332 TMEM234Q8WY98 164 aa11.65□□□□□ -0.54
COL6A6-203ENST00000511332 ST8SIA1Q92185 356 aa11.65□□□□□ -0.54
COL6A6-203ENST00000511332 ZG16BQ96DA0 208 aa11.65□□□□□ -0.54
COL6A6-203ENST00000511332 GPATCH1Q9BRR8 931 aaKnown RBP11.65□□□□□ -0.54
COL6A6-203ENST00000511332 UGT2B28Q9BY64 529 aa11.65□□□□□ -0.54
COL6A6-203ENST00000511332 PRDM14Q9GZV8 571 aa11.65□□□□□ -0.54
COL6A6-203ENST00000511332 NDE1Q9NXR1 346 aa11.65□□□□□ -0.54
COL6A6-203ENST00000511332 DNAJB12Q9NXW2 375 aaKnown RBP11.65□□□□□ -0.54
COL6A6-203ENST00000511332 SH3BGRL2Q9UJC5 107 aa11.65□□□□□ -0.54
COL6A6-203ENST00000511332 TINAGQ9UJW2 476 aa11.65□□□□□ -0.54
COL6A6-203ENST00000511332 SLC5A6Q9Y289 635 aa11.65□□□□□ -0.54
COL6A6-203ENST00000511332 GPC6Q9Y625 555 aaPredicted RBP11.65□□□□□ -0.54
COL6A6-203ENST00000511332 MYO18BQ8IUG5 2567 aa11.65□□□□□ -0.55
COL6A6-203ENST00000511332 OR2M5A3KFT3 312 aa11.64□□□□□ -0.55
COL6A6-203ENST00000511332 CLDN24A6NM45 220 aa11.64□□□□□ -0.55
COL6A6-203ENST00000511332 DNAJA2O60884 412 aa11.64□□□□□ -0.55
COL6A6-203ENST00000511332 HOXD4P09016 255 aaPredicted RBP11.64□□□□□ -0.55
COL6A6-203ENST00000511332 LINGO3P0C6S8 592 aa11.64□□□□□ -0.55
COL6A6-203ENST00000511332 POU3F2P20265 443 aaPredicted RBP11.64□□□□□ -0.55
COL6A6-203ENST00000511332 ME2P23368 584 aa11.64□□□□□ -0.55
COL6A6-203ENST00000511332 ADH6P28332 368 aa11.64□□□□□ -0.55
COL6A6-203ENST00000511332 AQP1P29972 269 aa11.64□□□□□ -0.55
COL6A6-203ENST00000511332 PTGER4P35408 488 aa11.64□□□□□ -0.55
COL6A6-203ENST00000511332 CPA2P48052 419 aa11.64□□□□□ -0.55
COL6A6-203ENST00000511332 GZMMP51124 257 aa11.64□□□□□ -0.55
COL6A6-203ENST00000511332 SLC7A2P52569 658 aa11.64□□□□□ -0.55
COL6A6-203ENST00000511332 PCBP3P57721 371 aaKnown RBP11.64□□□□□ -0.55
COL6A6-203ENST00000511332 B3GALT5-AS1P59052 145 aa11.64□□□□□ -0.55
COL6A6-203ENST00000511332 EEF1A1P68104 462 aaKnown RBP11.64□□□□□ -0.55
COL6A6-203ENST00000511332 FOXF1Q12946 379 aa11.64□□□□□ -0.55
COL6A6-203ENST00000511332 QPRTQ15274 297 aa11.64□□□□□ -0.55
COL6A6-203ENST00000511332 TMEM44Q2T9K0 475 aa11.64□□□□□ -0.55
COL6A6-203ENST00000511332 DCST1Q5T197 706 aa11.64□□□□□ -0.55
COL6A6-203ENST00000511332 C8orf82Q6P1X6 216 aaPredicted RBP11.64□□□□□ -0.55
COL6A6-203ENST00000511332 PATL1Q86TB9 770 aaKnown RBP11.64□□□□□ -0.55
COL6A6-203ENST00000511332 VRK2Q86Y07 508 aa11.64□□□□□ -0.55
COL6A6-203ENST00000511332 DOLPP1Q86YN1 238 aa11.64□□□□□ -0.55
COL6A6-203ENST00000511332 ARMC8Q8IUR7 673 aa11.64□□□□□ -0.55
COL6A6-203ENST00000511332 GRAMD2AQ8IUY3 354 aa11.64□□□□□ -0.55
COL6A6-203ENST00000511332 FITM2Q8N6M3 262 aa11.64□□□□□ -0.55
COL6A6-203ENST00000511332 OR2T12Q8NG77 320 aa11.64□□□□□ -0.55
COL6A6-203ENST00000511332 OR5M9Q8NGP3 310 aa11.64□□□□□ -0.55
COL6A6-203ENST00000511332 GPR119Q8TDV5 335 aa11.64□□□□□ -0.55
COL6A6-203ENST00000511332 SLC35B4Q969S0 331 aa11.64□□□□□ -0.55
COL6A6-203ENST00000511332 RELTQ969Z4 430 aa11.64□□□□□ -0.55
COL6A6-203ENST00000511332 MRGPRX4Q96LA9 322 aa11.64□□□□□ -0.55
COL6A6-203ENST00000511332 RNF145Q96MT1 663 aa11.64□□□□□ -0.55
COL6A6-203ENST00000511332 TIMP4Q99727 224 aa11.64□□□□□ -0.55
COL6A6-203ENST00000511332 SPAG4Q9NPE6 437 aa11.64□□□□□ -0.55
COL6A6-203ENST00000511332 PNPLA3Q9NST1 481 aa11.64□□□□□ -0.55
COL6A6-203ENST00000511332 ARL8BQ9NVJ2 186 aa11.64□□□□□ -0.55
COL6A6-203ENST00000511332 TNFRSF10DQ9UBN6 386 aa11.64□□□□□ -0.55
COL6A6-203ENST00000511332 PRDM4Q9UKN5 801 aa11.64□□□□□ -0.55
COL6A6-203ENST00000511332 CAMK2AQ9UQM7 478 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms