RNA–Protein interactions for RNA: ENST00000509618.1

HTT-206, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-206ENST00000509618 FRKP42685 505 aaPredicted RBP4.39□□□□□ -1.71
HTT-206ENST00000509618 CCT3P49368 545 aaKnown RBP4.39□□□□□ -1.71
HTT-206ENST00000509618 STARP49675 285 aa4.39□□□□□ -1.71
HTT-206ENST00000509618 SLC18A1P54219 525 aa4.39□□□□□ -1.71
HTT-206ENST00000509618 PNLIPRP2P54317 469 aa4.39□□□□□ -1.71
HTT-206ENST00000509618 DIO3P55073 304 aa4.39□□□□□ -1.71
HTT-206ENST00000509618 CLDN8P56748 225 aa4.39□□□□□ -1.71
HTT-206ENST00000509618 WDR4P57081 412 aaKnown RBP4.39□□□□□ -1.71
HTT-206ENST00000509618 RPS4XP62701 263 aaKnown RBP4.39□□□□□ -1.71
HTT-206ENST00000509618 SIRPAP78324 504 aa4.39□□□□□ -1.71
HTT-206ENST00000509618 PSG6Q00889 435 aa4.39□□□□□ -1.71
HTT-206ENST00000509618 SRYQ05066 204 aa4.39□□□□□ -1.71
HTT-206ENST00000509618 GAB1Q13480 694 aa4.39□□□□□ -1.71
HTT-206ENST00000509618 LASP1Q14847 261 aaKnown RBP4.39□□□□□ -1.71
HTT-206ENST00000509618 SF3B4Q15427 424 aaKnown RBP eCLIP4.39□□□□□ -1.71
HTT-206ENST00000509618 SMU1Q2TAY7 513 aa4.39□□□□□ -1.71
HTT-206ENST00000509618 PGGHGQ32M88 737 aa4.39□□□□□ -1.71
HTT-206ENST00000509618 AGBL2Q5U5Z8 902 aa4.39□□□□□ -1.71
HTT-206ENST00000509618 TIGD3Q6B0B8 471 aa4.39□□□□□ -1.71
HTT-206ENST00000509618 OR5M10Q6IEU7 315 aa4.39□□□□□ -1.71
HTT-206ENST00000509618 MFSD12Q6NUT3 480 aa4.39□□□□□ -1.71
HTT-206ENST00000509618 TMEM81Q6P7N7 255 aa4.39□□□□□ -1.71
HTT-206ENST00000509618 YRDCQ86U90 279 aaKnown RBP4.39□□□□□ -1.71
HTT-206ENST00000509618 PLCZ1Q86YW0 608 aa4.39□□□□□ -1.71
HTT-206ENST00000509618 NATD1Q8N6N6 113 aa4.39□□□□□ -1.71
HTT-206ENST00000509618 ZNF525Q8N782 197 aa4.39□□□□□ -1.71
HTT-206ENST00000509618 ZNF611Q8N823 705 aa4.39□□□□□ -1.71
HTT-206ENST00000509618 COX18Q8N8Q8 333 aa4.39□□□□□ -1.71
HTT-206ENST00000509618 CDRT4Q8N9R6 151 aa4.39□□□□□ -1.71
HTT-206ENST00000509618 VPS37AQ8NEZ2 397 aa4.39□□□□□ -1.71
HTT-206ENST00000509618 OR4K17Q8NGC6 315 aa4.39□□□□□ -1.71
HTT-206ENST00000509618 OR56A1Q8NGH5 318 aa4.39□□□□□ -1.71
HTT-206ENST00000509618 OR5AK3PQ8NH89 298 aa4.39□□□□□ -1.71
HTT-206ENST00000509618 OR5P2Q8WZ92 322 aa4.39□□□□□ -1.71
HTT-206ENST00000509618 PIK3R3Q92569 461 aa4.39□□□□□ -1.71
HTT-206ENST00000509618 HGDQ93099 445 aa4.39□□□□□ -1.71
HTT-206ENST00000509618 KCTD12Q96CX2 325 aaKnown RBP4.39□□□□□ -1.71
HTT-206ENST00000509618 STARD4Q96DR4 205 aa4.39□□□□□ -1.71
HTT-206ENST00000509618 FAM120BQ96EK7 910 aaKnown RBP4.39□□□□□ -1.71
HTT-206ENST00000509618 LRRC46Q96FV0 321 aa4.39□□□□□ -1.71
HTT-206ENST00000509618 OTUB1Q96FW1 271 aaPredicted RBP4.39□□□□□ -1.71
HTT-206ENST00000509618 SLC35A4Q96G79 324 aa4.39□□□□□ -1.71
HTT-206ENST00000509618 PLPPR2Q96GM1 343 aa4.39□□□□□ -1.71
HTT-206ENST00000509618 ATP6V1G3Q96LB4 118 aa4.39□□□□□ -1.71
HTT-206ENST00000509618 SFXN2Q96NB2 322 aa4.39□□□□□ -1.71
HTT-206ENST00000509618 ZBTB18Q99592 522 aa4.39□□□□□ -1.71
HTT-206ENST00000509618 LMF2Q9BU23 707 aaKnown RBP4.39□□□□□ -1.71
HTT-206ENST00000509618 DUSP26Q9BV47 211 aa4.39□□□□□ -1.71
HTT-206ENST00000509618 SFXN3Q9BWM7 321 aa4.39□□□□□ -1.71
HTT-206ENST00000509618 TBL1XR1Q9BZK7 514 aa4.39□□□□□ -1.71
HTT-206ENST00000509618 BHLHE41Q9C0J9 482 aaPredicted RBP4.39□□□□□ -1.71
HTT-206ENST00000509618 C20orf27Q9GZN8 174 aa4.39□□□□□ -1.71
HTT-206ENST00000509618 UBQLN3Q9H347 655 aa4.39□□□□□ -1.71
HTT-206ENST00000509618 ACBD3Q9H3P7 528 aa4.39□□□□□ -1.71
HTT-206ENST00000509618 MEAF6Q9HAF1 191 aa4.39□□□□□ -1.71
HTT-206ENST00000509618 ACKR4Q9NPB9 350 aa4.39□□□□□ -1.71
HTT-206ENST00000509618 SERHLQ9NQF3 203 aa4.39□□□□□ -1.71
HTT-206ENST00000509618 SDHAF3Q9NRP4 125 aa4.39□□□□□ -1.71
HTT-206ENST00000509618 PNPOQ9NVS9 261 aa4.39□□□□□ -1.71
HTT-206ENST00000509618 ASIC5Q9NY37 505 aa4.39□□□□□ -1.71
HTT-206ENST00000509618 PPP4R1LQ9P1A2 415 aa4.39□□□□□ -1.71
HTT-206ENST00000509618 PCDHGB4Q9UN71 923 aa4.39□□□□□ -1.71
HTT-206ENST00000509618 FAF1Q9UNN5 650 aaPredicted RBP4.39□□□□□ -1.71
HTT-206ENST00000509618 ABCG2Q9UNQ0 655 aa4.39□□□□□ -1.71
HTT-206ENST00000509618 PCDHGB3Q9Y5G1 929 aa4.39□□□□□ -1.71
HTT-206ENST00000509618 GOLGA8QA0A0J9YX86 632 aa4.38□□□□□ -1.71
HTT-206ENST00000509618 RNF103-CHMP3A0A140T963 221 aa4.38□□□□□ -1.71
HTT-206ENST00000509618 GXYLT2A0PJZ3 443 aa4.38□□□□□ -1.71
HTT-206ENST00000509618 GOLGA8OA6NCC3 632 aa4.38□□□□□ -1.71
HTT-206ENST00000509618 HMGB1P1B2RPK0 211 aaPredicted RBP4.38□□□□□ -1.71
HTT-206ENST00000509618 E9PBE3 544 aa4.38□□□□□ -1.71
HTT-206ENST00000509618 GOLGA8NF8WBI6 632 aa4.38□□□□□ -1.71
HTT-206ENST00000509618 H0Y3Z8 333 aa4.38□□□□□ -1.71
HTT-206ENST00000509618 H0YC42 278 aa4.38□□□□□ -1.71
HTT-206ENST00000509618 RNASET2O00584 256 aaKnown RBP4.38□□□□□ -1.71
HTT-206ENST00000509618 SCDO00767 359 aa4.38□□□□□ -1.71
HTT-206ENST00000509618 NDUFB5O43674 189 aa4.38□□□□□ -1.71
HTT-206ENST00000509618 SSX4O60224 188 aa4.38□□□□□ -1.71
HTT-206ENST00000509618 GMFGO60234 142 aa4.38□□□□□ -1.71
HTT-206ENST00000509618 TSPAN2O60636 221 aa4.38□□□□□ -1.71
HTT-206ENST00000509618 SNNO75324 88 aaPredicted RBP4.38□□□□□ -1.71
HTT-206ENST00000509618 UTS2O95399 124 aa4.38□□□□□ -1.71
HTT-206ENST00000509618 PSMG1O95456 288 aa4.38□□□□□ -1.71
HTT-206ENST00000509618 IL33O95760 270 aa4.38□□□□□ -1.71
HTT-206ENST00000509618 CGAP01215 116 aa4.38□□□□□ -1.71
HTT-206ENST00000509618 HMGN2P05204 90 aaKnown RBP4.38□□□□□ -1.71
HTT-206ENST00000509618 HPNP05981 417 aa4.38□□□□□ -1.71
HTT-206ENST00000509618 EPHA3P29320 983 aa4.38□□□□□ -1.71
HTT-206ENST00000509618 PTPN6P29350 595 aa4.38□□□□□ -1.71
HTT-206ENST00000509618 SRD5A2P31213 254 aa4.38□□□□□ -1.71
HTT-206ENST00000509618 S100A3P33764 101 aa4.38□□□□□ -1.71
HTT-206ENST00000509618 CD79BP40259 229 aa4.38□□□□□ -1.71
HTT-206ENST00000509618 PTGDSP41222 190 aa4.38□□□□□ -1.71
HTT-206ENST00000509618 CLNS1AP54105 237 aaKnown RBP4.38□□□□□ -1.71
HTT-206ENST00000509618 TPD52P55327 224 aaPredicted RBP4.38□□□□□ -1.71
HTT-206ENST00000509618 NME5P56597 212 aa4.38□□□□□ -1.71
HTT-206ENST00000509618 C21orf58P58505 322 aa4.38□□□□□ -1.71
HTT-206ENST00000509618 IRX1P78414 480 aaPredicted RBP4.38□□□□□ -1.71
HTT-206ENST00000509618 POU6F2P78424 691 aaPredicted RBP4.38□□□□□ -1.71
HTT-206ENST00000509618 RCAN2Q14206 197 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms