RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 FBXL4Q9UKA2 621 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 CBLCQ9ULV8 474 aa13.43□□□□□ -0.26
DDX41-208ENST00000507955 TRIOBPQ9H2D6 2365 aa13.42□□□□□ -0.26
DDX41-208ENST00000507955 IQCMA0A1B0GVH7 501 aa13.42□□□□□ -0.26
DDX41-208ENST00000507955 KDM4EB2RXH2 506 aaPredicted RBP13.42□□□□□ -0.26
DDX41-208ENST00000507955 IDH3BO43837 385 aa13.42□□□□□ -0.26
DDX41-208ENST00000507955 WNT1P04628 370 aa13.42□□□□□ -0.26
DDX41-208ENST00000507955 CLUP10909 449 aa13.42□□□□□ -0.26
DDX41-208ENST00000507955 MAOAP21397 527 aa13.42□□□□□ -0.26
DDX41-208ENST00000507955 RACK1P63244 317 aaKnown RBP13.42□□□□□ -0.26
DDX41-208ENST00000507955 PSG6Q00889 435 aa13.42□□□□□ -0.26
DDX41-208ENST00000507955 FABP5Q01469 135 aa13.42□□□□□ -0.26
DDX41-208ENST00000507955 LAPTM4BQ86VI4 370 aa13.42□□□□□ -0.26
DDX41-208ENST00000507955 SAMD14Q8IZD0 417 aaPredicted RBP13.42□□□□□ -0.26
DDX41-208ENST00000507955 CDRT4Q8N9R6 151 aa13.42□□□□□ -0.26
DDX41-208ENST00000507955 OSTF1Q92882 214 aa13.42□□□□□ -0.26
DDX41-208ENST00000507955 SECISBP2Q96T21 854 aaKnown RBP13.42□□□□□ -0.26
DDX41-208ENST00000507955 ORAI3Q9BRQ5 295 aa13.42□□□□□ -0.26
DDX41-208ENST00000507955 CACYBPQ9HB71 228 aaKnown RBP13.42□□□□□ -0.26
DDX41-208ENST00000507955 MEPEQ9NQ76 525 aaPredicted RBP13.42□□□□□ -0.26
DDX41-208ENST00000507955 SIDT1Q9NXL6 827 aaKnown RBP13.42□□□□□ -0.26
DDX41-208ENST00000507955 ENTPD2Q9Y5L3 495 aa13.42□□□□□ -0.26
DDX41-208ENST00000507955 SPACA6W5XKT8 324 aa13.42□□□□□ -0.26
DDX41-208ENST00000507955 A0A0B4J293 547 aa13.42□□□□□ -0.26
DDX41-208ENST00000507955 SDC3O75056 442 aa13.42□□□□□ -0.26
DDX41-208ENST00000507955 NCR1O76036 304 aa13.42□□□□□ -0.26
DDX41-208ENST00000507955 CPEP16870 476 aa13.42□□□□□ -0.26
DDX41-208ENST00000507955 STAT5AP42229 794 aa13.42□□□□□ -0.26
DDX41-208ENST00000507955 SLC1A3P43003 542 aa13.42□□□□□ -0.26
DDX41-208ENST00000507955 CCDC85BQ15834 202 aaPredicted RBP13.42□□□□□ -0.26
DDX41-208ENST00000507955 C3orf38Q5JPI3 329 aa13.42□□□□□ -0.26
DDX41-208ENST00000507955 ARMC6Q6NXE6 501 aa13.42□□□□□ -0.26
DDX41-208ENST00000507955 RANBP3LQ86VV4 465 aaPredicted RBP13.42□□□□□ -0.26
DDX41-208ENST00000507955 MCATQ8IVS2 390 aaKnown RBP13.42□□□□□ -0.26
DDX41-208ENST00000507955 VWA5B2Q8N398 1253 aa13.42□□□□□ -0.26
DDX41-208ENST00000507955 CAMKK1Q8N5S9 505 aa13.42□□□□□ -0.26
DDX41-208ENST00000507955 FAM181AQ8N9Y4 354 aa13.42□□□□□ -0.26
DDX41-208ENST00000507955 CYB561A3Q8NBI2 242 aa13.42□□□□□ -0.26
DDX41-208ENST00000507955 OR2T33Q8NG76 320 aa13.42□□□□□ -0.26
DDX41-208ENST00000507955 TMEM239Q8WW34 195 aa13.42□□□□□ -0.26
DDX41-208ENST00000507955 KLHDC7BQ96G42 594 aa13.42□□□□□ -0.26
DDX41-208ENST00000507955 SPACA7Q96KW9 195 aa13.42□□□□□ -0.26
DDX41-208ENST00000507955 TRIM45Q9H8W5 580 aaPredicted RBP13.42□□□□□ -0.26
DDX41-208ENST00000507955 TMEM184BQ9Y519 407 aaPredicted RBP13.42□□□□□ -0.26
DDX41-208ENST00000507955 KIR2DS5A0A0G2JLQ3 304 aa13.41□□□□□ -0.26
DDX41-208ENST00000507955 A0A0G2JNG1 304 aa13.41□□□□□ -0.26
DDX41-208ENST00000507955 A0A1W2PQL4 384 aaPredicted RBP13.41□□□□□ -0.26
DDX41-208ENST00000507955 MEIOCA2RUB1 952 aa13.41□□□□□ -0.26
DDX41-208ENST00000507955 TRAPPC13A5PLN9 417 aa13.41□□□□□ -0.26
DDX41-208ENST00000507955 LRRN3E7EW58 273 aa13.41□□□□□ -0.26
DDX41-208ENST00000507955 KIR2DS3K7RE56 304 aa13.41□□□□□ -0.26
DDX41-208ENST00000507955 REM1O75628 298 aa13.41□□□□□ -0.26
DDX41-208ENST00000507955 LYPD3O95274 346 aa13.41□□□□□ -0.26
DDX41-208ENST00000507955 GYPBP06028 91 aa13.41□□□□□ -0.26
DDX41-208ENST00000507955 CSF3P09919 207 aa13.41□□□□□ -0.26
DDX41-208ENST00000507955 SAGP10523 405 aaPredicted RBP13.41□□□□□ -0.26
DDX41-208ENST00000507955 CELP19835 753 aa13.41□□□□□ -0.26
DDX41-208ENST00000507955 PGDP52209 483 aa13.41□□□□□ -0.26
DDX41-208ENST00000507955 SLC16A1P53985 500 aa13.41□□□□□ -0.26
DDX41-208ENST00000507955 POU6F2P78424 691 aaPredicted RBP13.41□□□□□ -0.26
DDX41-208ENST00000507955 KIR2DS5Q14953 304 aa13.41□□□□□ -0.26
DDX41-208ENST00000507955 KLHL12Q53G59 568 aa13.41□□□□□ -0.26
DDX41-208ENST00000507955 RNLSQ5VYX0 342 aa13.41□□□□□ -0.26
DDX41-208ENST00000507955 FAM131AQ6UXB0 335 aa13.41□□□□□ -0.26
DDX41-208ENST00000507955 UBE2J2Q8N2K1 259 aa13.41□□□□□ -0.26
DDX41-208ENST00000507955 ZNF655Q8N720 491 aaPredicted RBP13.41□□□□□ -0.26
DDX41-208ENST00000507955 CTHRC1Q96CG8 243 aa13.41□□□□□ -0.26
DDX41-208ENST00000507955 NECTIN4Q96NY8 510 aa13.41□□□□□ -0.26
DDX41-208ENST00000507955 LRRN3Q9H3W5 708 aa13.41□□□□□ -0.26
DDX41-208ENST00000507955 DDX28Q9NUL7 540 aaKnown RBP13.41□□□□□ -0.26
DDX41-208ENST00000507955 NLGN3Q9NZ94 848 aa13.41□□□□□ -0.26
DDX41-208ENST00000507955 FLRT3Q9NZU0 649 aa13.41□□□□□ -0.26
DDX41-208ENST00000507955 POMT2Q9UKY4 750 aa13.41□□□□□ -0.26
DDX41-208ENST00000507955 CA14Q9ULX7 337 aa13.41□□□□□ -0.26
DDX41-208ENST00000507955 SF3B6Q9Y3B4 125 aaKnown RBP13.41□□□□□ -0.26
DDX41-208ENST00000507955 GRIP1Q9Y3R0 1128 aa13.41□□□□□ -0.26
DDX41-208ENST00000507955 CABIN1Q9Y6J0 2220 aa13.41□□□□□ -0.26
DDX41-208ENST00000507955 BRINP1O60477 761 aa13.41□□□□□ -0.26
DDX41-208ENST00000507955 AGR2O95994 175 aa13.41□□□□□ -0.26
DDX41-208ENST00000507955 DBIP07108 87 aaKnown RBP13.41□□□□□ -0.26
DDX41-208ENST00000507955 NGFRP08138 427 aa13.41□□□□□ -0.26
DDX41-208ENST00000507955 MRPL3P09001 348 aaKnown RBP13.41□□□□□ -0.26
DDX41-208ENST00000507955 S1PR1P21453 382 aa13.41□□□□□ -0.26
DDX41-208ENST00000507955 S100A1P23297 94 aa13.41□□□□□ -0.26
DDX41-208ENST00000507955 GFERP55789 205 aa13.41□□□□□ -0.26
DDX41-208ENST00000507955 FZD5Q13467 585 aa13.41□□□□□ -0.26
DDX41-208ENST00000507955 NKAIN2Q5VXU1 208 aa13.41□□□□□ -0.26
DDX41-208ENST00000507955 RAB43Q86YS6 212 aa13.41□□□□□ -0.26
DDX41-208ENST00000507955 GHDCQ8N2G8 530 aa13.41□□□□□ -0.26
DDX41-208ENST00000507955 C19orf47Q8N9M1 422 aaKnown RBP13.41□□□□□ -0.26
DDX41-208ENST00000507955 FANK1Q8TC84 345 aa13.41□□□□□ -0.26
DDX41-208ENST00000507955 LMF1Q96S06 567 aa13.41□□□□□ -0.26
DDX41-208ENST00000507955 ZNF649Q9BS31 505 aa13.41□□□□□ -0.26
DDX41-208ENST00000507955 TTTY10Q9BZA0 68 aa13.41□□□□□ -0.26
DDX41-208ENST00000507955 C11orf54Q9H0W9 315 aaPredicted RBP13.41□□□□□ -0.26
DDX41-208ENST00000507955 FGF20Q9NP95 211 aaPredicted RBP13.41□□□□□ -0.26
DDX41-208ENST00000507955 DUSP22Q9NRW4 184 aa13.41□□□□□ -0.26
DDX41-208ENST00000507955 PLSCR3Q9NRY6 295 aa13.41□□□□□ -0.26
DDX41-208ENST00000507955 ZNF223Q9UK11 482 aaPredicted RBP13.41□□□□□ -0.26
DDX41-208ENST00000507955 CDH10Q9Y6N8 788 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms