RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 OR10A4Q9H209 315 aa10.29□□□□□ -0.76
HMGCS1-204ENST00000507293 CXorf36Q9H7Y0 433 aa10.29□□□□□ -0.76
HMGCS1-204ENST00000507293 COQ10BQ9H8M1 238 aa10.29□□□□□ -0.76
HMGCS1-204ENST00000507293 EML4Q9HC35 981 aaKnown RBP10.29□□□□□ -0.76
HMGCS1-204ENST00000507293 GPATCH2Q9NW75 528 aa10.29□□□□□ -0.76
HMGCS1-204ENST00000507293 ICAM5Q9UMF0 924 aa10.29□□□□□ -0.76
HMGCS1-204ENST00000507293 FAF1Q9UNN5 650 aaPredicted RBP10.29□□□□□ -0.76
HMGCS1-204ENST00000507293 CARD8Q9Y2G2 431 aa10.29□□□□□ -0.76
HMGCS1-204ENST00000507293 KCNE3Q9Y6H6 103 aa10.29□□□□□ -0.76
HMGCS1-204ENST00000507293 ROS1P08922 2347 aa10.28□□□□□ -0.76
HMGCS1-204ENST00000507293 NIPBLQ6KC79 2804 aaeCLIP10.28□□□□□ -0.765e-7■■□□□ 13.4
HMGCS1-204ENST00000507293 GJE1A6NN92 205 aa10.28□□□□□ -0.76
HMGCS1-204ENST00000507293 H3BNH8 94 aa10.28□□□□□ -0.76
HMGCS1-204ENST00000507293 ZNF195O14628 629 aa10.28□□□□□ -0.76
HMGCS1-204ENST00000507293 SLU7O95391 586 aaKnown RBP10.28□□□□□ -0.76
HMGCS1-204ENST00000507293 CNOT4O95628 575 aaKnown RBP10.28□□□□□ -0.76
HMGCS1-204ENST00000507293 NTN1O95631 604 aa10.28□□□□□ -0.76
HMGCS1-204ENST00000507293 KRT16P08779 473 aa10.28□□□□□ -0.76
HMGCS1-204ENST00000507293 PABPC4LP0CB38 370 aaKnown RBP10.28□□□□□ -0.76
HMGCS1-204ENST00000507293 PCSK6P29122 969 aa10.28□□□□□ -0.76
HMGCS1-204ENST00000507293 ARRB2P32121 409 aa10.28□□□□□ -0.76
HMGCS1-204ENST00000507293 P2RX1P51575 399 aa10.28□□□□□ -0.76
HMGCS1-204ENST00000507293 ATP12AP54707 1039 aa10.28□□□□□ -0.76
HMGCS1-204ENST00000507293 RNPS1Q15287 305 aaKnown RBP10.28□□□□□ -0.76
HMGCS1-204ENST00000507293 TSC22D1Q15714 1073 aa10.28□□□□□ -0.76
HMGCS1-204ENST00000507293 TOMM34Q15785 309 aaPredicted RBP10.28□□□□□ -0.76
HMGCS1-204ENST00000507293 KLHL26Q53HC5 615 aa10.28□□□□□ -0.76
HMGCS1-204ENST00000507293 TMEM201Q5SNT2 666 aa10.28□□□□□ -0.76
HMGCS1-204ENST00000507293 C6orf136Q5SQH8 315 aa10.28□□□□□ -0.76
HMGCS1-204ENST00000507293 IL23RQ5VWK5 629 aa10.28□□□□□ -0.76
HMGCS1-204ENST00000507293 TFAP2EQ6VUC0 442 aa10.28□□□□□ -0.76
HMGCS1-204ENST00000507293 NUFIP2Q7Z417 695 aaKnown RBP10.28□□□□□ -0.76
HMGCS1-204ENST00000507293 TUSC5Q8IXB3 177 aa10.28□□□□□ -0.76
HMGCS1-204ENST00000507293 RIBC1Q8N443 379 aaPredicted RBP10.28□□□□□ -0.76
HMGCS1-204ENST00000507293 KRTCAP2Q8N6L1 136 aa10.28□□□□□ -0.76
HMGCS1-204ENST00000507293 TMCO5AQ8N6Q1 288 aa10.28□□□□□ -0.76
HMGCS1-204ENST00000507293 ZNF611Q8N823 705 aa10.28□□□□□ -0.76
HMGCS1-204ENST00000507293 ATP6V1C2Q8NEY4 427 aa10.28□□□□□ -0.76
HMGCS1-204ENST00000507293 STEAP2Q8NFT2 490 aa10.28□□□□□ -0.76
HMGCS1-204ENST00000507293 OR5AK3PQ8NH89 298 aa10.28□□□□□ -0.76
HMGCS1-204ENST00000507293 RFWD2Q8NHY2 731 aa10.28□□□□□ -0.76
HMGCS1-204ENST00000507293 PSMA8Q8TAA3 256 aa10.28□□□□□ -0.76
HMGCS1-204ENST00000507293 SFXN5Q8TD22 340 aa10.28□□□□□ -0.76
HMGCS1-204ENST00000507293 TCP10LQ8TDR4 215 aa10.28□□□□□ -0.76
HMGCS1-204ENST00000507293 ZFP90Q8TF47 636 aa10.28□□□□□ -0.76
HMGCS1-204ENST00000507293 AKAP1Q92667 903 aaKnown RBP eCLIP10.28□□□□□ -0.76
HMGCS1-204ENST00000507293 REXO5Q96IC2 774 aaKnown RBP10.28□□□□□ -0.76
HMGCS1-204ENST00000507293 OR7D2Q96RA2 312 aa10.28□□□□□ -0.76
HMGCS1-204ENST00000507293 HOXD1Q9GZZ0 328 aa10.28□□□□□ -0.76
HMGCS1-204ENST00000507293 TIGARQ9NQ88 270 aa10.28□□□□□ -0.76
HMGCS1-204ENST00000507293 ATAD3AQ9NVI7 634 aa10.28□□□□□ -0.76
HMGCS1-204ENST00000507293 KLHL13Q9P2N7 655 aa10.28□□□□□ -0.76
HMGCS1-204ENST00000507293 GPC6Q9Y625 555 aaPredicted RBP10.28□□□□□ -0.76
HMGCS1-204ENST00000507293 ABCA2Q9BZC7 2435 aa10.27□□□□□ -0.76
HMGCS1-204ENST00000507293 IGHV3-15A0A0B4J1V0 119 aa10.27□□□□□ -0.77
HMGCS1-204ENST00000507293 NPIPB9F8W1W9 429 aa10.27□□□□□ -0.77
HMGCS1-204ENST00000507293 GTPBP1O00178 669 aaKnown RBP10.27□□□□□ -0.77
HMGCS1-204ENST00000507293 CFLARO15519 480 aa10.27□□□□□ -0.77
HMGCS1-204ENST00000507293 GCM2O75603 506 aaPredicted RBP10.27□□□□□ -0.77
HMGCS1-204ENST00000507293 LYPLA1O75608 230 aaPredicted RBP10.27□□□□□ -0.77
HMGCS1-204ENST00000507293 PAX1P15863 534 aa10.27□□□□□ -0.77
HMGCS1-204ENST00000507293 PRKCAP17252 672 aa10.27□□□□□ -0.77
HMGCS1-204ENST00000507293 ADH6P28332 368 aa10.27□□□□□ -0.77
HMGCS1-204ENST00000507293 SOAT1P35610 550 aa10.27□□□□□ -0.77
HMGCS1-204ENST00000507293 SELENBP1Q13228 472 aa10.27□□□□□ -0.77
HMGCS1-204ENST00000507293 LSM12Q3MHD2 195 aaKnown RBP10.27□□□□□ -0.77
HMGCS1-204ENST00000507293 TMEM176BQ3YBM2 270 aaPredicted RBP10.27□□□□□ -0.77
HMGCS1-204ENST00000507293 FCRLAQ7L513 359 aa10.27□□□□□ -0.77
HMGCS1-204ENST00000507293 GABRG1Q8N1C3 465 aa10.27□□□□□ -0.77
HMGCS1-204ENST00000507293 NATD1Q8N6N6 113 aa10.27□□□□□ -0.77
HMGCS1-204ENST00000507293 FNDC5Q8NAU1 212 aa10.27□□□□□ -0.77
HMGCS1-204ENST00000507293 OR5D16Q8NGK9 328 aa10.27□□□□□ -0.77
HMGCS1-204ENST00000507293 RAB3IL1Q8TBN0 382 aa10.27□□□□□ -0.77
HMGCS1-204ENST00000507293 GPR119Q8TDV5 335 aa10.27□□□□□ -0.77
HMGCS1-204ENST00000507293 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.27□□□□□ -0.77
HMGCS1-204ENST00000507293 MOAP1Q96BY2 351 aa10.27□□□□□ -0.77
HMGCS1-204ENST00000507293 ZNF524Q96C55 264 aa10.27□□□□□ -0.77
HMGCS1-204ENST00000507293 COQ8BQ96D53 544 aa10.27□□□□□ -0.77
HMGCS1-204ENST00000507293 TACO1Q9BSH4 297 aaKnown RBP10.27□□□□□ -0.77
HMGCS1-204ENST00000507293 CXorf56Q9H5V9 222 aa10.27□□□□□ -0.77
HMGCS1-204ENST00000507293 ANKZF1Q9H8Y5 726 aa10.27□□□□□ -0.77
HMGCS1-204ENST00000507293 ZNF701Q9NV72 531 aaPredicted RBP10.27□□□□□ -0.77
HMGCS1-204ENST00000507293 LGALS13Q9UHV8 139 aa10.27□□□□□ -0.77
HMGCS1-204ENST00000507293 DTNAQ9Y4J8 743 aa10.27□□□□□ -0.77
HMGCS1-204ENST00000507293 ACTL7BQ9Y614 415 aa10.27□□□□□ -0.77
HMGCS1-204ENST00000507293 USF3Q68DE3 2245 aa10.26□□□□□ -0.77
HMGCS1-204ENST00000507293 A0A1W2PNR3 127 aa10.26□□□□□ -0.77
HMGCS1-204ENST00000507293 ZNF264O43296 627 aa10.26□□□□□ -0.77
HMGCS1-204ENST00000507293 TMCC2O75069 709 aa10.26□□□□□ -0.77
HMGCS1-204ENST00000507293 PRKD3O94806 890 aa10.26□□□□□ -0.77
HMGCS1-204ENST00000507293 NUDT17P0C025 328 aa10.26□□□□□ -0.77
HMGCS1-204ENST00000507293 UBL4AP11441 157 aa10.26□□□□□ -0.77
HMGCS1-204ENST00000507293 PRPS1L1P21108 318 aa10.26□□□□□ -0.77
HMGCS1-204ENST00000507293 ENPP1P22413 925 aa10.26□□□□□ -0.77
HMGCS1-204ENST00000507293 IL32P24001 234 aa10.26□□□□□ -0.77
HMGCS1-204ENST00000507293 CCR4P51679 360 aa10.26□□□□□ -0.77
HMGCS1-204ENST00000507293 ATP5J2P56134 94 aa10.26□□□□□ -0.77
HMGCS1-204ENST00000507293 RPS26P62854 115 aaKnown RBP10.26□□□□□ -0.77
HMGCS1-204ENST00000507293 QPRTQ15274 297 aa10.26□□□□□ -0.77
HMGCS1-204ENST00000507293 PDZK1Q5T2W1 519 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms