RNA–Protein interactions for RNA: ENST00000506542.1

SERF1B-204, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 3 BASIC

Gene SERF1B, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-204ENST00000506542 EXT1Q16394 746 aa12.73□□□□□ -0.37
SERF1B-204ENST00000506542 FLYWCH1Q4VC44 716 aa12.73□□□□□ -0.37
SERF1B-204ENST00000506542 LIN52Q52LA3 116 aa12.73□□□□□ -0.37
SERF1B-204ENST00000506542 ACER2Q5QJU3 275 aa12.73□□□□□ -0.37
SERF1B-204ENST00000506542 RNF220Q5VTB9 566 aa12.73□□□□□ -0.37
SERF1B-204ENST00000506542 ANKRD34AQ69YU3 496 aa12.73□□□□□ -0.37
SERF1B-204ENST00000506542 Q6ZS92 163 aa12.73□□□□□ -0.37
SERF1B-204ENST00000506542 C9orf40Q8IXQ3 194 aa12.73□□□□□ -0.37
SERF1B-204ENST00000506542 CLIP4Q8N3C7 705 aa12.73□□□□□ -0.37
SERF1B-204ENST00000506542 BCORP1Q8N888 145 aa12.73□□□□□ -0.37
SERF1B-204ENST00000506542 M1APQ8TC57 530 aa12.73□□□□□ -0.37
SERF1B-204ENST00000506542 TFAP2CQ92754 450 aa12.73□□□□□ -0.37
SERF1B-204ENST00000506542 PNPLA2Q96AD5 504 aa12.73□□□□□ -0.37
SERF1B-204ENST00000506542 ADI1Q9BV57 179 aa12.73□□□□□ -0.37
SERF1B-204ENST00000506542 CDCP1Q9H5V8 836 aa12.73□□□□□ -0.37
SERF1B-204ENST00000506542 A4GNTQ9UNA3 340 aa12.73□□□□□ -0.37
SERF1B-204ENST00000506542 PPIEQ9UNP9 301 aaKnown RBP12.73□□□□□ -0.37
SERF1B-204ENST00000506542 PCDHGB7Q9Y5F8 929 aa12.73□□□□□ -0.37
SERF1B-204ENST00000506542 PCDHGA10Q9Y5H3 936 aa12.73□□□□□ -0.37
SERF1B-204ENST00000506542 NPIPB9F8W1W9 429 aa12.72□□□□□ -0.37
SERF1B-204ENST00000506542 J3QKU1 62 aa12.72□□□□□ -0.37
SERF1B-204ENST00000506542 RPSAP08865 295 aaKnown RBP12.72□□□□□ -0.37
SERF1B-204ENST00000506542 ICAM2P13598 275 aa12.72□□□□□ -0.37
SERF1B-204ENST00000506542 UQCRFS1P47985 274 aa12.72□□□□□ -0.37
SERF1B-204ENST00000506542 RFX3P48380 749 aa12.72□□□□□ -0.37
SERF1B-204ENST00000506542 DCAF7P61962 342 aa12.72□□□□□ -0.37
SERF1B-204ENST00000506542 MERTKQ12866 999 aa12.72□□□□□ -0.37
SERF1B-204ENST00000506542 EBPQ15125 230 aaKnown RBP12.72□□□□□ -0.37
SERF1B-204ENST00000506542 INPP5JQ15735 1006 aaPredicted RBP12.72□□□□□ -0.37
SERF1B-204ENST00000506542 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.72□□□□□ -0.37
SERF1B-204ENST00000506542 EXOC3L2Q2M3D2 409 aa12.72□□□□□ -0.37
SERF1B-204ENST00000506542 CHERPQ8IWX8 916 aaKnown RBP12.72□□□□□ -0.37
SERF1B-204ENST00000506542 MARVELD2Q8N4S9 558 aa12.72□□□□□ -0.37
SERF1B-204ENST00000506542 B3GNT7Q8NFL0 401 aa12.72□□□□□ -0.37
SERF1B-204ENST00000506542 OR52J3Q8NH60 311 aa12.72□□□□□ -0.37
SERF1B-204ENST00000506542 CPT1CQ8TCG5 803 aa12.72□□□□□ -0.37
SERF1B-204ENST00000506542 PHF10Q8WUB8 498 aaKnown RBP12.72□□□□□ -0.37
SERF1B-204ENST00000506542 SNRNP40Q96DI7 357 aaKnown RBP12.72□□□□□ -0.37
SERF1B-204ENST00000506542 LCORQ96JN0 433 aaPredicted RBP12.72□□□□□ -0.37
SERF1B-204ENST00000506542 SIGLEC12Q96PQ1 595 aa12.72□□□□□ -0.37
SERF1B-204ENST00000506542 NXF5Q9H1B4 397 aaKnown RBP12.72□□□□□ -0.37
SERF1B-204ENST00000506542 NMNAT1Q9HAN9 279 aaPredicted RBP12.72□□□□□ -0.37
SERF1B-204ENST00000506542 RLIMQ9NVW2 624 aa12.72□□□□□ -0.37
SERF1B-204ENST00000506542 TMEFF2Q9UIK5 374 aaPredicted RBP12.72□□□□□ -0.37
SERF1B-204ENST00000506542 USP9XQ93008 2570 aaPredicted RBP12.71□□□□□ -0.37
SERF1B-204ENST00000506542 C2orf92A0A1B0GVN3 265 aa12.71□□□□□ -0.37
SERF1B-204ENST00000506542 CDHR4A6H8M9 788 aa12.71□□□□□ -0.37
SERF1B-204ENST00000506542 CLDN24A6NM45 220 aa12.71□□□□□ -0.37
SERF1B-204ENST00000506542 HS6ST1O60243 411 aa12.71□□□□□ -0.37
SERF1B-204ENST00000506542 WISP2O76076 250 aa12.71□□□□□ -0.37
SERF1B-204ENST00000506542 FUT4P22083 530 aa12.71□□□□□ -0.37
SERF1B-204ENST00000506542 RGS8P57771 180 aaPredicted RBP12.71□□□□□ -0.37
SERF1B-204ENST00000506542 EPS8Q12929 822 aa12.71□□□□□ -0.37
SERF1B-204ENST00000506542 ZNF141Q15928 474 aa12.71□□□□□ -0.37
SERF1B-204ENST00000506542 DECR1Q16698 335 aa12.71□□□□□ -0.37
SERF1B-204ENST00000506542 RFX4Q33E94 735 aa12.71□□□□□ -0.37
SERF1B-204ENST00000506542 SLC36A3Q495N2 470 aa12.71□□□□□ -0.37
SERF1B-204ENST00000506542 MRPL2Q5T653 305 aaKnown RBP12.71□□□□□ -0.37
SERF1B-204ENST00000506542 ABHD17BQ5VST6 288 aa12.71□□□□□ -0.37
SERF1B-204ENST00000506542 KDM4DQ6B0I6 523 aa12.71□□□□□ -0.37
SERF1B-204ENST00000506542 H3F3CQ6NXT2 135 aa12.71□□□□□ -0.37
SERF1B-204ENST00000506542 FAHD1Q6P587 224 aa12.71□□□□□ -0.37
SERF1B-204ENST00000506542 SLC29A4Q7RTT9 530 aa12.71□□□□□ -0.37
SERF1B-204ENST00000506542 DHRSXQ8N5I4 330 aa12.71□□□□□ -0.37
SERF1B-204ENST00000506542 GIPC3Q8TF64 312 aa12.71□□□□□ -0.37
SERF1B-204ENST00000506542 PRRC1Q96M27 445 aa12.71□□□□□ -0.37
SERF1B-204ENST00000506542 NR1H4Q96RI1 486 aaPredicted RBP12.71□□□□□ -0.37
SERF1B-204ENST00000506542 GAL3ST4Q96RP7 486 aa12.71□□□□□ -0.37
SERF1B-204ENST00000506542 ANKRD60Q9BZ19 345 aa12.71□□□□□ -0.37
SERF1B-204ENST00000506542 WWTR1Q9GZV5 400 aa12.71□□□□□ -0.37
SERF1B-204ENST00000506542 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.71□□□□□ -0.37
SERF1B-204ENST00000506542 ASF1BQ9NVP2 202 aa12.71□□□□□ -0.37
SERF1B-204ENST00000506542 RHCGQ9UBD6 479 aa12.71□□□□□ -0.37
SERF1B-204ENST00000506542 HEATR5AQ86XA9 2040 aa12.71□□□□□ -0.37
SERF1B-204ENST00000506542 TMEM200CA6NKL6 621 aa12.7□□□□□ -0.38
SERF1B-204ENST00000506542 H0YAE9 185 aa12.7□□□□□ -0.38
SERF1B-204ENST00000506542 FRS3O43559 492 aa12.7□□□□□ -0.38
SERF1B-204ENST00000506542 TPST2O60704 377 aa12.7□□□□□ -0.38
SERF1B-204ENST00000506542 H1F0P07305 194 aaKnown RBP12.7□□□□□ -0.38
SERF1B-204ENST00000506542 IGFBP5P24593 272 aa12.7□□□□□ -0.38
SERF1B-204ENST00000506542 CAPGP40121 348 aa12.7□□□□□ -0.38
SERF1B-204ENST00000506542 TNFSF10P50591 281 aa12.7□□□□□ -0.38
SERF1B-204ENST00000506542 DAPP51397 102 aa12.7□□□□□ -0.38
SERF1B-204ENST00000506542 RAD23AP54725 363 aa12.7□□□□□ -0.38
SERF1B-204ENST00000506542 PSMD4P55036 377 aaKnown RBP12.7□□□□□ -0.38
SERF1B-204ENST00000506542 SMIM11AP58511 58 aa12.7□□□□□ -0.38
SERF1B-204ENST00000506542 PMP22Q01453 160 aa12.7□□□□□ -0.38
SERF1B-204ENST00000506542 PIN1Q13526 163 aaPredicted RBP12.7□□□□□ -0.38
SERF1B-204ENST00000506542 ZNF169Q14929 603 aaPredicted RBP12.7□□□□□ -0.38
SERF1B-204ENST00000506542 MICAQ29983 383 aa12.7□□□□□ -0.38
SERF1B-204ENST00000506542 PDZK1Q5T2W1 519 aa12.7□□□□□ -0.38
SERF1B-204ENST00000506542 HLA-DQA1Q5Y7H0 255 aa12.7□□□□□ -0.38
SERF1B-204ENST00000506542 SPINK14Q6IE38 97 aa12.7□□□□□ -0.38
SERF1B-204ENST00000506542 TSPYL5Q86VY4 417 aaPredicted RBP12.7□□□□□ -0.38
SERF1B-204ENST00000506542 TAGAPQ8N103 731 aa12.7□□□□□ -0.38
SERF1B-204ENST00000506542 ZNF441Q8N8Z8 693 aa12.7□□□□□ -0.38
SERF1B-204ENST00000506542 PIK3C3Q8NEB9 887 aa12.7□□□□□ -0.38
SERF1B-204ENST00000506542 C17orf47Q8NEP4 570 aa12.7□□□□□ -0.38
SERF1B-204ENST00000506542 TM9SF4Q92544 642 aa12.7□□□□□ -0.38
SERF1B-204ENST00000506542 NR4A3Q92570 626 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms