RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 ZBTB8AQ96BR9 441 aa16.47■□□□□ 0.23
PDLIM7-216ENST00000506537 SDCCAG3Q96C92 435 aa16.47■□□□□ 0.23
PDLIM7-216ENST00000506537 TMEM19Q96HH6 336 aa16.47■□□□□ 0.23
PDLIM7-216ENST00000506537 RNF145Q96MT1 663 aa16.47■□□□□ 0.23
PDLIM7-216ENST00000506537 TRIM8Q9BZR9 551 aa16.47■□□□□ 0.23
PDLIM7-216ENST00000506537 LAT2Q9GZY6 243 aa16.47■□□□□ 0.23
PDLIM7-216ENST00000506537 RAD21L1Q9H4I0 556 aa16.47■□□□□ 0.23
PDLIM7-216ENST00000506537 A4GALTQ9NPC4 353 aa16.47■□□□□ 0.23
PDLIM7-216ENST00000506537 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.47■□□□□ 0.23
PDLIM7-216ENST00000506537 ADGRG4Q8IZF6 3080 aa16.46■□□□□ 0.23
PDLIM7-216ENST00000506537 A0A0G2JNJ9 132 aa16.46■□□□□ 0.23
PDLIM7-216ENST00000506537 H3BML4 177 aa16.46■□□□□ 0.23
PDLIM7-216ENST00000506537 DNAJA2O60884 412 aa16.46■□□□□ 0.23
PDLIM7-216ENST00000506537 EPPINO95925 133 aa16.46■□□□□ 0.23
PDLIM7-216ENST00000506537 UBTFL6P0CB48 400 aaPredicted RBP16.46■□□□□ 0.23
PDLIM7-216ENST00000506537 DRD4P21917 467 aa16.46■□□□□ 0.23
PDLIM7-216ENST00000506537 CCR4P51679 360 aa16.46■□□□□ 0.23
PDLIM7-216ENST00000506537 SUCLG1P53597 346 aaKnown RBP16.46■□□□□ 0.23
PDLIM7-216ENST00000506537 CLDN20P56880 219 aa16.46■□□□□ 0.23
PDLIM7-216ENST00000506537 SELPLGQ14242 412 aa16.46■□□□□ 0.23
PDLIM7-216ENST00000506537 BCL2A1Q16548 175 aa16.46■□□□□ 0.23
PDLIM7-216ENST00000506537 RUNDC3AQ59EK9 446 aa16.46■□□□□ 0.23
PDLIM7-216ENST00000506537 NSUN5P2Q63ZY6 315 aa16.46■□□□□ 0.23
PDLIM7-216ENST00000506537 EIF3MQ7L2H7 374 aaKnown RBP16.46■□□□□ 0.23
PDLIM7-216ENST00000506537 UBQLNLQ8IYU4 475 aa16.46■□□□□ 0.23
PDLIM7-216ENST00000506537 ZPLD1Q8TCW7 415 aa16.46■□□□□ 0.23
PDLIM7-216ENST00000506537 TRIB1Q96RU8 372 aa16.46■□□□□ 0.23
PDLIM7-216ENST00000506537 CGREF1Q99674 301 aa16.46■□□□□ 0.23
PDLIM7-216ENST00000506537 TREX2Q9BQ50 279 aaPredicted RBP16.46■□□□□ 0.23
PDLIM7-216ENST00000506537 THUMPD1Q9NXG2 353 aaKnown RBP16.46■□□□□ 0.23
PDLIM7-216ENST00000506537 ARMCX1Q9P291 453 aa16.46■□□□□ 0.23
PDLIM7-216ENST00000506537 Q9UFV3 132 aa16.46■□□□□ 0.23
PDLIM7-216ENST00000506537 CD8B2A6NJW9 211 aa16.45■□□□□ 0.22
PDLIM7-216ENST00000506537 CLCA1A8K7I4 914 aa16.45■□□□□ 0.22
PDLIM7-216ENST00000506537 LINC01387J3KSC0 135 aa16.45■□□□□ 0.22
PDLIM7-216ENST00000506537 ADAM11O75078 769 aa16.45■□□□□ 0.22
PDLIM7-216ENST00000506537 CYP7B1O75881 506 aa16.45■□□□□ 0.22
PDLIM7-216ENST00000506537 NTN1O95631 604 aa16.45■□□□□ 0.22
PDLIM7-216ENST00000506537 NUDT14O95848 222 aa16.45■□□□□ 0.22
PDLIM7-216ENST00000506537 PEPDP12955 493 aa16.45■□□□□ 0.22
PDLIM7-216ENST00000506537 GPX2P18283 190 aa16.45■□□□□ 0.22
PDLIM7-216ENST00000506537 IL11P20809 199 aa16.45■□□□□ 0.22
PDLIM7-216ENST00000506537 PPIBP23284 216 aaKnown RBP16.45■□□□□ 0.22
PDLIM7-216ENST00000506537 CRISP3P54108 245 aa16.45■□□□□ 0.22
PDLIM7-216ENST00000506537 KCNJ10P78508 379 aa16.45■□□□□ 0.22
PDLIM7-216ENST00000506537 NFYCQ13952 458 aa16.45■□□□□ 0.22
PDLIM7-216ENST00000506537 RIPPLY2Q5TAB7 128 aa16.45■□□□□ 0.22
PDLIM7-216ENST00000506537 SPATA21Q7Z572 469 aa16.45■□□□□ 0.22
PDLIM7-216ENST00000506537 GGNQ86UU5 652 aa16.45■□□□□ 0.22
PDLIM7-216ENST00000506537 LACC1Q8IV20 430 aa16.45■□□□□ 0.22
PDLIM7-216ENST00000506537 NAXEQ8NCW5 288 aa16.45■□□□□ 0.22
PDLIM7-216ENST00000506537 TOR1AIP2Q8NFQ8 470 aa16.45■□□□□ 0.22
PDLIM7-216ENST00000506537 TNIP2Q8NFZ5 429 aa16.45■□□□□ 0.22
PDLIM7-216ENST00000506537 WDR60Q8WVS4 1066 aa16.45■□□□□ 0.22
PDLIM7-216ENST00000506537 SMPDL3BQ92485 455 aa16.45■□□□□ 0.22
PDLIM7-216ENST00000506537 CNOT9Q92600 299 aaKnown RBP16.45■□□□□ 0.22
PDLIM7-216ENST00000506537 ELAC2Q9BQ52 826 aaKnown RBP16.45■□□□□ 0.22
PDLIM7-216ENST00000506537 FAM107BQ9H098 131 aa16.45■□□□□ 0.22
PDLIM7-216ENST00000506537 MTHFD2LQ9H903 347 aaPredicted RBP16.45■□□□□ 0.22
PDLIM7-216ENST00000506537 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.45■□□□□ 0.22
PDLIM7-216ENST00000506537 MRGBPQ9NV56 204 aa16.45■□□□□ 0.22
PDLIM7-216ENST00000506537 CLCF1Q9UBD9 225 aa16.45■□□□□ 0.22
PDLIM7-216ENST00000506537 SLC35A3Q9Y2D2 325 aa16.45■□□□□ 0.22
PDLIM7-216ENST00000506537 AP4B1Q9Y6B7 739 aa16.45■□□□□ 0.22
PDLIM7-216ENST00000506537 CAPN7Q9Y6W3 813 aa16.45■□□□□ 0.22
PDLIM7-216ENST00000506537 CACNA1CQ13936 2221 aa16.45■□□□□ 0.22
PDLIM7-216ENST00000506537 MBD3L4A6NDZ8 208 aaPredicted RBP16.44■□□□□ 0.22
PDLIM7-216ENST00000506537 MBD3L3A6NE82 208 aaPredicted RBP16.44■□□□□ 0.22
PDLIM7-216ENST00000506537 MBD3L5A6NJ08 208 aaPredicted RBP16.44■□□□□ 0.22
PDLIM7-216ENST00000506537 FAM47E-STBD1D6RA91 191 aa16.44■□□□□ 0.22
PDLIM7-216ENST00000506537 FXYD1O00168 92 aa16.44■□□□□ 0.22
PDLIM7-216ENST00000506537 ETV2O00321 342 aaPredicted RBP16.44■□□□□ 0.22
PDLIM7-216ENST00000506537 SEC14L5O43304 696 aa16.44■□□□□ 0.22
PDLIM7-216ENST00000506537 EFNA2O43921 213 aa16.44■□□□□ 0.22
PDLIM7-216ENST00000506537 CLDN14O95500 239 aa16.44■□□□□ 0.22
PDLIM7-216ENST00000506537 ARAFP10398 606 aa16.44■□□□□ 0.22
PDLIM7-216ENST00000506537 GP1BBP13224 206 aa16.44■□□□□ 0.22
PDLIM7-216ENST00000506537 PRKCAP17252 672 aa16.44■□□□□ 0.22
PDLIM7-216ENST00000506537 COL8A1P27658 744 aa16.44■□□□□ 0.22
PDLIM7-216ENST00000506537 GRNP28799 593 aaKnown RBP16.44■□□□□ 0.22
PDLIM7-216ENST00000506537 CHRNB4P30926 498 aa16.44■□□□□ 0.22
PDLIM7-216ENST00000506537 CEACAM8P31997 349 aaPredicted RBP16.44■□□□□ 0.22
PDLIM7-216ENST00000506537 MTPNP58546 118 aa16.44■□□□□ 0.22
PDLIM7-216ENST00000506537 GNGT1P63211 74 aa16.44■□□□□ 0.22
PDLIM7-216ENST00000506537 ART3Q13508 389 aa16.44■□□□□ 0.22
PDLIM7-216ENST00000506537 CBFBQ13951 182 aa16.44■□□□□ 0.22
PDLIM7-216ENST00000506537 CAPRIN1Q14444 709 aaKnown RBP16.44■□□□□ 0.22
PDLIM7-216ENST00000506537 QPRTQ15274 297 aa16.44■□□□□ 0.22
PDLIM7-216ENST00000506537 ADRM1Q16186 407 aa16.44■□□□□ 0.22
PDLIM7-216ENST00000506537 GCNT6Q5T4J0 391 aa16.44■□□□□ 0.22
PDLIM7-216ENST00000506537 REP15Q6BDI9 236 aa16.44■□□□□ 0.22
PDLIM7-216ENST00000506537 SNX32Q86XE0 403 aa16.44■□□□□ 0.22
PDLIM7-216ENST00000506537 VRK2Q86Y07 508 aa16.44■□□□□ 0.22
PDLIM7-216ENST00000506537 C9orf106Q8NAJ2 232 aa16.44■□□□□ 0.22
PDLIM7-216ENST00000506537 OR10Q1Q8NGQ4 319 aa16.44■□□□□ 0.22
PDLIM7-216ENST00000506537 MBD3L2Q8NHZ7 208 aaPredicted RBP16.44■□□□□ 0.22
PDLIM7-216ENST00000506537 FBXO27Q8NI29 283 aa16.44■□□□□ 0.22
PDLIM7-216ENST00000506537 PMM1Q92871 262 aa16.44■□□□□ 0.22
PDLIM7-216ENST00000506537 ANKRD27Q96NW4 1050 aa16.44■□□□□ 0.22
PDLIM7-216ENST00000506537 THUMPD3Q9BV44 507 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms