RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 DPP10Q8N608 796 aa15.07■□□□□ 0
SNCA-209ENST00000506244 FAM71CQ8NEG0 241 aa15.07■□□□□ 0
SNCA-209ENST00000506244 LILRB4Q8NHJ6 448 aa15.07■□□□□ 0
SNCA-209ENST00000506244 WDR60Q8WVS4 1066 aa15.07■□□□□ 0
SNCA-209ENST00000506244 SMPDL3BQ92485 455 aa15.07■□□□□ 0
SNCA-209ENST00000506244 RNF145Q96MT1 663 aa15.07■□□□□ 0
SNCA-209ENST00000506244 ZNF317Q96PQ6 595 aaPredicted RBP15.07■□□□□ 0
SNCA-209ENST00000506244 UCN2Q96RP3 112 aa15.07■□□□□ 0
SNCA-209ENST00000506244 NSRP1Q9H0G5 558 aaKnown RBP15.07■□□□□ 0
SNCA-209ENST00000506244 MTHFD2LQ9H903 347 aaPredicted RBP15.07■□□□□ 0
SNCA-209ENST00000506244 EXOSC3Q9NQT5 275 aaKnown RBP15.07■□□□□ 0
SNCA-209ENST00000506244 PAQR5Q9NXK6 330 aaPredicted RBP15.07■□□□□ 0
SNCA-209ENST00000506244 Q9UFV3 132 aa15.07■□□□□ 0
SNCA-209ENST00000506244 KCNE5Q9UJ90 142 aa15.07■□□□□ 0
SNCA-209ENST00000506244 ZNF337Q9Y3M9 751 aa15.07■□□□□ 0
SNCA-209ENST00000506244 GMEB1Q9Y692 573 aa15.07■□□□□ 0
SNCA-209ENST00000506244 CENPVL1A0A0U1RR11 272 aa15.06■□□□□ 0
SNCA-209ENST00000506244 PRAMEF27A3QJZ7 478 aa15.06■□□□□ 0
SNCA-209ENST00000506244 AGAP5A6NIR3 686 aa15.06■□□□□ 0
SNCA-209ENST00000506244 GJE1A6NN92 205 aa15.06■□□□□ 0
SNCA-209ENST00000506244 C5orf58C9J3I9 102 aa15.06■□□□□ 0
SNCA-209ENST00000506244 DVL2O14641 736 aa15.06■□□□□ 0
SNCA-209ENST00000506244 SEC14L5O43304 696 aa15.06■□□□□ 0
SNCA-209ENST00000506244 CYP7B1O75881 506 aa15.06■□□□□ 0
SNCA-209ENST00000506244 C1QCP02747 245 aa15.06■□□□□ 0
SNCA-209ENST00000506244 FCGR2AP12318 317 aa15.06■□□□□ 0
SNCA-209ENST00000506244 BMP2P12643 396 aa15.06■□□□□ 0
SNCA-209ENST00000506244 UQCRBP14927 111 aa15.06■□□□□ 0
SNCA-209ENST00000506244 IL7RP16871 459 aa15.06■□□□□ 0
SNCA-209ENST00000506244 SLC6A8P48029 635 aa15.06■□□□□ 0
SNCA-209ENST00000506244 FOXF1Q12946 379 aa15.06■□□□□ 0
SNCA-209ENST00000506244 ZSWIM7Q19AV6 140 aa15.06■□□□□ 0
SNCA-209ENST00000506244 LIN52Q52LA3 116 aa15.06■□□□□ 0
SNCA-209ENST00000506244 GCNT6Q5T4J0 391 aa15.06■□□□□ 0
SNCA-209ENST00000506244 OLIG3Q7RTU3 272 aa15.06■□□□□ 0
SNCA-209ENST00000506244 ADGRE4PQ86SQ3 457 aa15.06■□□□□ 0
SNCA-209ENST00000506244 CCDC71Q8IV32 467 aaPredicted RBP15.06■□□□□ 0
SNCA-209ENST00000506244 METTL25Q8N6Q8 603 aa15.06■□□□□ 0
SNCA-209ENST00000506244 OR5M1Q8NGP8 315 aa15.06■□□□□ 0
SNCA-209ENST00000506244 TMEM234Q8WY98 164 aa15.06■□□□□ 0
SNCA-209ENST00000506244 ST8SIA1Q92185 356 aa15.06■□□□□ 0
SNCA-209ENST00000506244 WNT2BQ93097 391 aa15.06■□□□□ 0
SNCA-209ENST00000506244 MRGPRX4Q96LA9 322 aa15.06■□□□□ 0
SNCA-209ENST00000506244 A4GALTQ9NPC4 353 aa15.06■□□□□ 0
SNCA-209ENST00000506244 KCNJ16Q9NPI9 418 aa15.06■□□□□ 0
SNCA-209ENST00000506244 SLC25A37Q9NYZ2 338 aa15.06■□□□□ 0
SNCA-209ENST00000506244 CLCF1Q9UBD9 225 aa15.06■□□□□ 0
SNCA-209ENST00000506244 A0A0G2JPF8 293 aa15.05■□□□□ -0
SNCA-209ENST00000506244 FAM90A27PA6NNH2 459 aa15.05■□□□□ -0
SNCA-209ENST00000506244 BBIP1A8MTZ0 92 aa15.05■□□□□ -0
SNCA-209ENST00000506244 HNRNPCL2B2RXH8 293 aa15.05■□□□□ -0
SNCA-209ENST00000506244 HNRNPCL3B7ZW38 293 aa15.05■□□□□ -0
SNCA-209ENST00000506244 SLC22A2O15244 555 aa15.05■□□□□ -0
SNCA-209ENST00000506244 OIP5O43482 229 aa15.05■□□□□ -0
SNCA-209ENST00000506244 HNRNPCL1O60812 293 aaKnown RBP15.05■□□□□ -0
SNCA-209ENST00000506244 TFPTP0C1Z6 253 aa15.05■□□□□ -0
SNCA-209ENST00000506244 HNRNPCL4P0DMR1 293 aa15.05■□□□□ -0
SNCA-209ENST00000506244 NID1P14543 1247 aa15.05■□□□□ -0
SNCA-209ENST00000506244 RPS4Y1P22090 263 aaKnown RBP15.05■□□□□ -0
SNCA-209ENST00000506244 ADSLP30566 484 aaPredicted RBP15.05■□□□□ -0
SNCA-209ENST00000506244 CEACAM8P31997 349 aaPredicted RBP15.05■□□□□ -0
SNCA-209ENST00000506244 PGM1P36871 562 aa15.05■□□□□ -0
SNCA-209ENST00000506244 RAC1P63000 192 aa15.05■□□□□ -0
SNCA-209ENST00000506244 KCNJ10P78508 379 aa15.05■□□□□ -0
SNCA-209ENST00000506244 MAPK14Q16539 360 aa15.05■□□□□ -0
SNCA-209ENST00000506244 NDUFAF6Q330K2 333 aa15.05■□□□□ -0
SNCA-209ENST00000506244 COQ5Q5HYK3 327 aa15.05■□□□□ -0
SNCA-209ENST00000506244 PDSS1Q5T2R2 415 aa15.05■□□□□ -0
SNCA-209ENST00000506244 OR2A2Q6IF42 318 aa15.05■□□□□ -0
SNCA-209ENST00000506244 SEM1Q6ZVN7 128 aa15.05■□□□□ -0
SNCA-209ENST00000506244 P4HA3Q7Z4N8 544 aa15.05■□□□□ -0
SNCA-209ENST00000506244 MSRB3Q8IXL7 192 aa15.05■□□□□ -0
SNCA-209ENST00000506244 TNIP2Q8NFZ5 429 aa15.05■□□□□ -0
SNCA-209ENST00000506244 BBS10Q8TAM1 723 aa15.05■□□□□ -0
SNCA-209ENST00000506244 GPR119Q8TDV5 335 aa15.05■□□□□ -0
SNCA-209ENST00000506244 SLC38A5Q8WUX1 472 aa15.05■□□□□ -0
SNCA-209ENST00000506244 LRRC46Q96FV0 321 aa15.05■□□□□ -0
SNCA-209ENST00000506244 TMEM19Q96HH6 336 aa15.05■□□□□ -0
SNCA-209ENST00000506244 TREX2Q9BQ50 279 aaPredicted RBP15.05■□□□□ -0
SNCA-209ENST00000506244 ARMC7Q9H6L4 198 aa15.05■□□□□ -0
SNCA-209ENST00000506244 RUBCNLQ9H714 662 aa15.05■□□□□ -0
SNCA-209ENST00000506244 VAPAQ9P0L0 249 aa15.05■□□□□ -0
SNCA-209ENST00000506244 ZNF629Q9UEG4 869 aaPredicted RBP15.05■□□□□ -0
SNCA-209ENST00000506244 ZNF175Q9Y473 711 aa15.05■□□□□ -0
SNCA-209ENST00000506244 DSPPQ9NZW4 1301 aa15.05■□□□□ -0
SNCA-209ENST00000506244 MED12Q93074 2177 aa15.05■□□□□ -0
SNCA-209ENST00000506244 CACNA1CQ13936 2221 aa15.05■□□□□ -0
SNCA-209ENST00000506244 TRBV5-3A0A0A0MS03 114 aa15.04■□□□□ -0
SNCA-209ENST00000506244 SLC22A20A6NK97 555 aa15.04■□□□□ -0
SNCA-209ENST00000506244 SHISA8B8ZZ34 492 aa15.04■□□□□ -0
SNCA-209ENST00000506244 ETV2O00321 342 aaPredicted RBP15.04■□□□□ -0
SNCA-209ENST00000506244 PRKCAP17252 672 aa15.04■□□□□ -0
SNCA-209ENST00000506244 PSMA4P25789 261 aaKnown RBP15.04■□□□□ -0
SNCA-209ENST00000506244 EEF1A1P68104 462 aaKnown RBP15.04■□□□□ -0
SNCA-209ENST00000506244 SELENBP1Q13228 472 aa15.04■□□□□ -0
SNCA-209ENST00000506244 NFYCQ13952 458 aa15.04■□□□□ -0
SNCA-209ENST00000506244 LARS2Q15031 903 aaKnown RBP15.04■□□□□ -0
SNCA-209ENST00000506244 QPRTQ15274 297 aa15.04■□□□□ -0
SNCA-209ENST00000506244 SLC25A53Q5H9E4 307 aa15.04■□□□□ -0
SNCA-209ENST00000506244 EEF1A1P5Q5VTE0 462 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms