RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 ANKRD26P1Q6NSI1 321 aa18.72■□□□□ 0.59
SQSTM1-210ENST00000506042 Q6ZT83 130 aa18.72■□□□□ 0.59
SQSTM1-210ENST00000506042 TUSC5Q8IXB3 177 aa18.72■□□□□ 0.59
SQSTM1-210ENST00000506042 DDIASQ8IXT1 998 aa18.72■□□□□ 0.59
SQSTM1-210ENST00000506042 ZNF614Q8N883 585 aa18.72■□□□□ 0.59
SQSTM1-210ENST00000506042 ZHX1-C8orf76Q96EF9 292 aa18.72■□□□□ 0.59
SQSTM1-210ENST00000506042 ACTRT3Q9BYD9 372 aa18.72■□□□□ 0.59
SQSTM1-210ENST00000506042 GRIP2Q9C0E4 1043 aa18.72■□□□□ 0.59
SQSTM1-210ENST00000506042 MGAT4BQ9UQ53 548 aa18.72■□□□□ 0.59
SQSTM1-210ENST00000506042 SPIN1Q9Y657 262 aaPredicted RBP18.72■□□□□ 0.59
SQSTM1-210ENST00000506042 CHD3Q12873 2000 aaKnown RBP18.72■□□□□ 0.59
SQSTM1-210ENST00000506042 OVOL3O00110 214 aa18.71■□□□□ 0.59
SQSTM1-210ENST00000506042 ADAP00813 363 aa18.71■□□□□ 0.59
SQSTM1-210ENST00000506042 HMGN2P05204 90 aaKnown RBP18.71■□□□□ 0.59
SQSTM1-210ENST00000506042 SDC1P18827 310 aa18.71■□□□□ 0.59
SQSTM1-210ENST00000506042 CRHR1P34998 444 aa18.71■□□□□ 0.59
SQSTM1-210ENST00000506042 DSCR9P59020 149 aa18.71■□□□□ 0.59
SQSTM1-210ENST00000506042 RAC3P60763 192 aa18.71■□□□□ 0.59
SQSTM1-210ENST00000506042 CSNK2A1P68400 391 aaPredicted RBP18.71■□□□□ 0.59
SQSTM1-210ENST00000506042 PDE7AQ13946 482 aa18.71■□□□□ 0.59
SQSTM1-210ENST00000506042 CBFBQ13951 182 aa18.71■□□□□ 0.59
SQSTM1-210ENST00000506042 LASP1Q14847 261 aaKnown RBP18.71■□□□□ 0.59
SQSTM1-210ENST00000506042 KIAA0040Q15053 153 aa18.71■□□□□ 0.59
SQSTM1-210ENST00000506042 PPA1Q15181 289 aa18.71■□□□□ 0.59
SQSTM1-210ENST00000506042 TAB1Q15750 504 aa18.71■□□□□ 0.59
SQSTM1-210ENST00000506042 STK11Q15831 433 aa18.71■□□□□ 0.59
SQSTM1-210ENST00000506042 GALNTL6Q49A17 601 aa18.71■□□□□ 0.59
SQSTM1-210ENST00000506042 CLEC6AQ6EIG7 209 aa18.71■□□□□ 0.59
SQSTM1-210ENST00000506042 HMBOX1Q6NT76 420 aa18.71■□□□□ 0.59
SQSTM1-210ENST00000506042 CDC73Q6P1J9 531 aa18.71■□□□□ 0.59
SQSTM1-210ENST00000506042 C3orf33Q6P1S2 294 aa18.71■□□□□ 0.59
SQSTM1-210ENST00000506042 ZNF100Q8IYN0 542 aa18.71■□□□□ 0.59
SQSTM1-210ENST00000506042 FBXO27Q8NI29 283 aa18.71■□□□□ 0.59
SQSTM1-210ENST00000506042 PIWIL2Q8TC59 973 aaKnown RBP18.71■□□□□ 0.59
SQSTM1-210ENST00000506042 TMEM234Q8WY98 164 aa18.71■□□□□ 0.59
SQSTM1-210ENST00000506042 TMEM158Q8WZ71 300 aa18.71■□□□□ 0.59
SQSTM1-210ENST00000506042 PPP3R2Q96LZ3 170 aa18.71■□□□□ 0.59
SQSTM1-210ENST00000506042 SLCO5A1Q9H2Y9 848 aa18.71■□□□□ 0.59
SQSTM1-210ENST00000506042 FIS1Q9Y3D6 152 aa18.71■□□□□ 0.59
SQSTM1-210ENST00000506042 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.7■□□□□ 0.58
SQSTM1-210ENST00000506042 DUXAA6NLW8 204 aa18.7■□□□□ 0.58
SQSTM1-210ENST00000506042 CD5LO43866 347 aa18.7■□□□□ 0.58
SQSTM1-210ENST00000506042 EIF4E2O60573 245 aaKnown RBP18.7■□□□□ 0.58
SQSTM1-210ENST00000506042 PLIN3O60664 434 aa18.7■□□□□ 0.58
SQSTM1-210ENST00000506042 GCM2O75603 506 aaPredicted RBP18.7■□□□□ 0.58
SQSTM1-210ENST00000506042 LYPLA1O75608 230 aaPredicted RBP18.7■□□□□ 0.58
SQSTM1-210ENST00000506042 ENPP1P22413 925 aa18.7■□□□□ 0.58
SQSTM1-210ENST00000506042 ZNF117Q03924 483 aa18.7■□□□□ 0.58
SQSTM1-210ENST00000506042 FAPQ12884 760 aa18.7■□□□□ 0.58
SQSTM1-210ENST00000506042 CHRFAM7AQ494W8 412 aa18.7■□□□□ 0.58
SQSTM1-210ENST00000506042 KLHL17Q6TDP4 642 aa18.7■□□□□ 0.58
SQSTM1-210ENST00000506042 RAB3IL1Q8TBN0 382 aa18.7■□□□□ 0.58
SQSTM1-210ENST00000506042 FAM120BQ96EK7 910 aaKnown RBP18.7■□□□□ 0.58
SQSTM1-210ENST00000506042 GIMAP5Q96F15 307 aa18.7■□□□□ 0.58
SQSTM1-210ENST00000506042 YAE1D1Q9NRH1 226 aa18.7■□□□□ 0.58
SQSTM1-210ENST00000506042 POU2F3Q9UKI9 436 aa18.7■□□□□ 0.58
SQSTM1-210ENST00000506042 PCNX3Q9H6A9 2034 aa18.69■□□□□ 0.58
SQSTM1-210ENST00000506042 RNF212BA8MTL3 300 aa18.69■□□□□ 0.58
SQSTM1-210ENST00000506042 AK1P00568 194 aa18.69■□□□□ 0.58
SQSTM1-210ENST00000506042 GGT1P19440 569 aa18.69■□□□□ 0.58
SQSTM1-210ENST00000506042 CCT3P49368 545 aaKnown RBP18.69■□□□□ 0.58
SQSTM1-210ENST00000506042 CCR4P51679 360 aa18.69■□□□□ 0.58
SQSTM1-210ENST00000506042 ATP12AP54707 1039 aa18.69■□□□□ 0.58
SQSTM1-210ENST00000506042 BSPH1Q075Z2 132 aa18.69■□□□□ 0.58
SQSTM1-210ENST00000506042 ZNF844Q08AG5 666 aa18.69■□□□□ 0.58
SQSTM1-210ENST00000506042 RASGEF1BQ0VAM2 473 aa18.69■□□□□ 0.58
SQSTM1-210ENST00000506042 ARL13AQ5H913 290 aaPredicted RBP18.69■□□□□ 0.58
SQSTM1-210ENST00000506042 TIMM23BQ5SRD1 257 aa18.69■□□□□ 0.58
SQSTM1-210ENST00000506042 DCST2Q5T1A1 773 aa18.69■□□□□ 0.58
SQSTM1-210ENST00000506042 CCNJQ5T5M9 372 aa18.69■□□□□ 0.58
SQSTM1-210ENST00000506042 FAM219BQ5XKK7 198 aa18.69■□□□□ 0.58
SQSTM1-210ENST00000506042 TMEM108Q6UXF1 575 aa18.69■□□□□ 0.58
SQSTM1-210ENST00000506042 ATP6V1C2Q8NEY4 427 aa18.69■□□□□ 0.58
SQSTM1-210ENST00000506042 SLC25A43Q8WUT9 341 aaPredicted RBP18.69■□□□□ 0.58
SQSTM1-210ENST00000506042 OR5P2Q8WZ92 322 aa18.69■□□□□ 0.58
SQSTM1-210ENST00000506042 CDS1Q92903 461 aa18.69■□□□□ 0.58
SQSTM1-210ENST00000506042 FCRL1Q96LA6 429 aa18.69■□□□□ 0.58
SQSTM1-210ENST00000506042 BCO1Q9HAY6 547 aa18.69■□□□□ 0.58
SQSTM1-210ENST00000506042 CISD1Q9NZ45 108 aaKnown RBP18.69■□□□□ 0.58
SQSTM1-210ENST00000506042 CARD8Q9Y2G2 431 aa18.69■□□□□ 0.58
SQSTM1-210ENST00000506042 DTNAQ9Y4J8 743 aa18.69■□□□□ 0.58
SQSTM1-210ENST00000506042 CCL27Q9Y4X3 112 aa18.69■□□□□ 0.58
SQSTM1-210ENST00000506042 MAGED1Q9Y5V3 778 aaPredicted RBP18.69■□□□□ 0.58
SQSTM1-210ENST00000506042 SCAMP2O15127 329 aaKnown RBP18.68■□□□□ 0.58
SQSTM1-210ENST00000506042 CFLARO15519 480 aa18.68■□□□□ 0.58
SQSTM1-210ENST00000506042 ZNF264O43296 627 aa18.68■□□□□ 0.58
SQSTM1-210ENST00000506042 TRIM13O60858 407 aa18.68■□□□□ 0.58
SQSTM1-210ENST00000506042 DANCRP0C864 163 aa18.68■□□□□ 0.58
SQSTM1-210ENST00000506042 UBL4AP11441 157 aa18.68■□□□□ 0.58
SQSTM1-210ENST00000506042 FKBP2P26885 142 aaKnown RBP18.68■□□□□ 0.58
SQSTM1-210ENST00000506042 CDKN1AP38936 164 aa18.68■□□□□ 0.58
SQSTM1-210ENST00000506042 OR3A2P47893 321 aa18.68■□□□□ 0.58
SQSTM1-210ENST00000506042 NUDT6P53370 316 aa18.68■□□□□ 0.58
SQSTM1-210ENST00000506042 CDH11P55287 796 aa18.68■□□□□ 0.58
SQSTM1-210ENST00000506042 CD226Q15762 336 aa18.68■□□□□ 0.58
SQSTM1-210ENST00000506042 CLEC2AQ6UVW9 174 aa18.68■□□□□ 0.58
SQSTM1-210ENST00000506042 GALNT5Q7Z7M9 940 aa18.68■□□□□ 0.58
SQSTM1-210ENST00000506042 ZNF619Q8N2I2 560 aa18.68■□□□□ 0.58
SQSTM1-210ENST00000506042 OR5W2Q8NH69 310 aa18.68■□□□□ 0.58
SQSTM1-210ENST00000506042 CLHC1Q8NHS4 586 aa18.68■□□□□ 0.58
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