RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 TIGARQ9NQ88 270 aa9.38□□□□□ -0.91
NR1I3-222ENST00000506018 GLRX2Q9NS18 164 aa9.38□□□□□ -0.91
NR1I3-222ENST00000506018 CCM2LQ9NUG4 571 aaPredicted RBP9.38□□□□□ -0.91
NR1I3-222ENST00000506018 PROCRQ9UNN8 238 aa9.38□□□□□ -0.91
NR1I3-222ENST00000506018 PLEKHA6Q9Y2H5 1048 aa9.38□□□□□ -0.91
NR1I3-222ENST00000506018 CELSR1Q9NYQ6 3014 aa9.38□□□□□ -0.91
NR1I3-222ENST00000506018 C7orf72A4D263 438 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 GJE1A6NN92 205 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 B4DXG7 233 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 GTPBP1O00178 669 aaKnown RBP9.37□□□□□ -0.91
NR1I3-222ENST00000506018 C6orf47O95873 294 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 AK1P00568 194 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 PABPC4LP0CB38 370 aaKnown RBP9.37□□□□□ -0.91
NR1I3-222ENST00000506018 CD8BP10966 210 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 LBPP18428 481 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 SOAT1P35610 550 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 CD79BP40259 229 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 CLDN20P56880 219 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 RAC1P63000 192 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 SIRPAP78324 504 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 PGS1Q32NB8 556 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 DCST2Q5T1A1 773 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 CCNJQ5T5M9 372 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 PAMR1Q6UXH9 720 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 APOOLQ6UXV4 268 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 ESPNLQ6ZVH7 1005 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 SPATA19Q7Z5L4 167 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 STK32CQ86UX6 486 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 FNDC9Q8TBE3 224 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 PHOSPHO1Q8TCT1 267 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 FIG4Q92562 907 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 CDS1Q92903 461 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 COQ8BQ96D53 544 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 STARD4Q96DR4 205 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 THOC1Q96FV9 657 aaKnown RBP9.37□□□□□ -0.91
NR1I3-222ENST00000506018 SH3YL1Q96HL8 342 aaPredicted RBP9.37□□□□□ -0.91
NR1I3-222ENST00000506018 MAELQ96JY0 434 aaKnown RBP9.37□□□□□ -0.91
NR1I3-222ENST00000506018 ALPK1Q96QP1 1244 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 MED18Q9BUE0 208 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 TMEM120AQ9BXJ8 343 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 RTN4RQ9BZR6 473 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 SIRT3Q9NTG7 399 aaPredicted RBP9.37□□□□□ -0.91
NR1I3-222ENST00000506018 GIMAP2Q9UG22 337 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 C2CD3Q4AC94 2353 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 HIVEP1P15822 2718 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 ZNF195O14628 629 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 AGR2O95994 175 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 G6PDP11413 515 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 CD99P14209 185 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 ELK4P28324 431 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 ADH6P28332 368 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 IDH3AP50213 366 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 P2RX1P51575 399 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 SUMO3P55854 103 aaPredicted RBP9.37□□□□□ -0.91
NR1I3-222ENST00000506018 CLDN8P56748 225 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 C21orf58P58505 322 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 STX1BP61266 288 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 DPY19L1Q2PZI1 675 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 TMEM44Q2T9K0 475 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 PLPPR5Q32ZL2 321 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 VWA1Q6PCB0 445 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 FAM214BQ7L5A3 538 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 KRTCAP2Q8N6L1 136 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 ZNF614Q8N883 585 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 OR6K3Q8NGY3 331 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 OR10D3Q8NH80 312 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 RFWD2Q8NHY2 731 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 C10orf82Q8WW14 230 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 MBD6Q96DN6 1003 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 OTUB1Q96FW1 271 aaPredicted RBP9.37□□□□□ -0.91
NR1I3-222ENST00000506018 GMPPAQ96IJ6 420 aaPredicted RBP9.37□□□□□ -0.91
NR1I3-222ENST00000506018 C3orf30Q96M34 536 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 RNF145Q96MT1 663 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 DPY30Q9C005 99 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 CXXC4Q9H2H0 198 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 RABEP2Q9H5N1 569 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 CXorf36Q9H7Y0 433 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 MED17Q9NVC6 651 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 EXD2Q9NVH0 621 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 ASIC5Q9NY37 505 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 TESMINQ9Y4I5 508 aa9.37□□□□□ -0.91
NR1I3-222ENST00000506018 AKAP9Q99996 3911 aa9.36□□□□□ -0.91
NR1I3-222ENST00000506018 PRRC2AP48634 2157 aaKnown RBP9.36□□□□□ -0.91
NR1I3-222ENST00000506018 HEATR5AQ86XA9 2040 aa9.36□□□□□ -0.91
NR1I3-222ENST00000506018 ITPR3Q14573 2671 aa9.36□□□□□ -0.91
NR1I3-222ENST00000506018 SHISA8B8ZZ34 492 aa9.36□□□□□ -0.91
NR1I3-222ENST00000506018 H0YC42 278 aa9.36□□□□□ -0.91
NR1I3-222ENST00000506018 C16orf97H3BN30 126 aa9.36□□□□□ -0.91
NR1I3-222ENST00000506018 RNASET2O00584 256 aaKnown RBP9.36□□□□□ -0.91
NR1I3-222ENST00000506018 SDHDO14521 159 aa9.36□□□□□ -0.91
NR1I3-222ENST00000506018 UBDO15205 165 aa9.36□□□□□ -0.91
NR1I3-222ENST00000506018 HRGP04196 525 aa9.36□□□□□ -0.91
NR1I3-222ENST00000506018 PPP3CBP16298 524 aa9.36□□□□□ -0.91
NR1I3-222ENST00000506018 MATN1P21941 496 aa9.36□□□□□ -0.91
NR1I3-222ENST00000506018 EPHA3P29320 983 aa9.36□□□□□ -0.91
NR1I3-222ENST00000506018 ADSLP30566 484 aaPredicted RBP9.36□□□□□ -0.91
NR1I3-222ENST00000506018 KIR2DL2P43627 348 aaPredicted RBP9.36□□□□□ -0.91
NR1I3-222ENST00000506018 ATP12AP54707 1039 aa9.36□□□□□ -0.91
NR1I3-222ENST00000506018 TPD52P55327 224 aaPredicted RBP9.36□□□□□ -0.91
NR1I3-222ENST00000506018 FAM27E3Q08E93 113 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms