RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 NPIPA7E9PJI5 369 aa14.29□□□□□ -0.12
PDLIM7-213ENST00000505074 CFLARO15519 480 aa14.29□□□□□ -0.12
PDLIM7-213ENST00000505074 SS18L1O75177 396 aaPredicted RBP14.29□□□□□ -0.12
PDLIM7-213ENST00000505074 HSPA4LO95757 839 aa14.29□□□□□ -0.12
PDLIM7-213ENST00000505074 NPIPA8P0DM63 369 aa14.29□□□□□ -0.12
PDLIM7-213ENST00000505074 PPP3CBP16298 524 aa14.29□□□□□ -0.12
PDLIM7-213ENST00000505074 LCN1P31025 176 aa14.29□□□□□ -0.12
PDLIM7-213ENST00000505074 SOAT1P35610 550 aa14.29□□□□□ -0.12
PDLIM7-213ENST00000505074 ACVR1BP36896 505 aa14.29□□□□□ -0.12
PDLIM7-213ENST00000505074 RUNX1T1Q06455 604 aa14.29□□□□□ -0.12
PDLIM7-213ENST00000505074 FOXF1Q12946 379 aa14.29□□□□□ -0.12
PDLIM7-213ENST00000505074 GUSBP1Q15486 140 aa14.29□□□□□ -0.12
PDLIM7-213ENST00000505074 CD226Q15762 336 aa14.29□□□□□ -0.12
PDLIM7-213ENST00000505074 ESPNLQ6ZVH7 1005 aa14.29□□□□□ -0.12
PDLIM7-213ENST00000505074 WFDC8Q8IUA0 241 aa14.29□□□□□ -0.12
PDLIM7-213ENST00000505074 RIBC1Q8N443 379 aaPredicted RBP14.29□□□□□ -0.12
PDLIM7-213ENST00000505074 TMCO5AQ8N6Q1 288 aa14.29□□□□□ -0.12
PDLIM7-213ENST00000505074 BANPQ8N9N5 519 aa14.29□□□□□ -0.12
PDLIM7-213ENST00000505074 FNDC5Q8NAU1 212 aa14.29□□□□□ -0.12
PDLIM7-213ENST00000505074 FAM110BQ8TC76 370 aa14.29□□□□□ -0.12
PDLIM7-213ENST00000505074 ACTRT2Q8TDY3 377 aa14.29□□□□□ -0.12
PDLIM7-213ENST00000505074 ADAMTS15Q8TE58 950 aa14.29□□□□□ -0.12
PDLIM7-213ENST00000505074 AKAP1Q92667 903 aaKnown RBP eCLIP14.29□□□□□ -0.12
PDLIM7-213ENST00000505074 GTPBP3Q969Y2 492 aaKnown RBP14.29□□□□□ -0.12
PDLIM7-213ENST00000505074 PLPPR2Q96GM1 343 aa14.29□□□□□ -0.12
PDLIM7-213ENST00000505074 SLCO5A1Q9H2Y9 848 aa14.29□□□□□ -0.12
PDLIM7-213ENST00000505074 SIRT3Q9NTG7 399 aaPredicted RBP14.29□□□□□ -0.12
PDLIM7-213ENST00000505074 ATAD3AQ9NVI7 634 aa14.29□□□□□ -0.12
PDLIM7-213ENST00000505074 MKS1Q9NXB0 559 aa14.29□□□□□ -0.12
PDLIM7-213ENST00000505074 ATP6V1HQ9UI12 483 aa14.29□□□□□ -0.12
PDLIM7-213ENST00000505074 A0A0J9YW62 118 aa14.28□□□□□ -0.12
PDLIM7-213ENST00000505074 H3BNH8 94 aa14.28□□□□□ -0.12
PDLIM7-213ENST00000505074 OVOL3O00110 214 aa14.28□□□□□ -0.12
PDLIM7-213ENST00000505074 GTPBP1O00178 669 aaKnown RBP14.28□□□□□ -0.12
PDLIM7-213ENST00000505074 C6orf47O95873 294 aa14.28□□□□□ -0.12
PDLIM7-213ENST00000505074 THBDP07204 575 aa14.28□□□□□ -0.12
PDLIM7-213ENST00000505074 TUBBP07437 444 aa14.28□□□□□ -0.12
PDLIM7-213ENST00000505074 LAMP1P11279 417 aa14.28□□□□□ -0.12
PDLIM7-213ENST00000505074 THBS2P35442 1172 aa14.28□□□□□ -0.12
PDLIM7-213ENST00000505074 CCT3P49368 545 aaKnown RBP14.28□□□□□ -0.12
PDLIM7-213ENST00000505074 ZNF117Q03924 483 aa14.28□□□□□ -0.12
PDLIM7-213ENST00000505074 PTGR1Q14914 329 aa14.28□□□□□ -0.12
PDLIM7-213ENST00000505074 CTU2Q2VPK5 515 aaKnown RBP14.28□□□□□ -0.12
PDLIM7-213ENST00000505074 C6orf52Q5T4I8 152 aa14.28□□□□□ -0.12
PDLIM7-213ENST00000505074 GTF2IRD2BQ6EKJ0 949 aa14.28□□□□□ -0.12
PDLIM7-213ENST00000505074 CDC73Q6P1J9 531 aa14.28□□□□□ -0.12
PDLIM7-213ENST00000505074 GTF2IRD2Q86UP8 949 aa14.28□□□□□ -0.12
PDLIM7-213ENST00000505074 TRABD2AQ86V40 505 aa14.28□□□□□ -0.12
PDLIM7-213ENST00000505074 LILRA2Q8N149 483 aa14.28□□□□□ -0.12
PDLIM7-213ENST00000505074 ATP6V1C2Q8NEY4 427 aa14.28□□□□□ -0.12
PDLIM7-213ENST00000505074 OR56A1Q8NGH5 318 aa14.28□□□□□ -0.12
PDLIM7-213ENST00000505074 OR5AK3PQ8NH89 298 aa14.28□□□□□ -0.12
PDLIM7-213ENST00000505074 RFWD2Q8NHY2 731 aa14.28□□□□□ -0.12
PDLIM7-213ENST00000505074 TCP10LQ8TDR4 215 aa14.28□□□□□ -0.12
PDLIM7-213ENST00000505074 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.28□□□□□ -0.12
PDLIM7-213ENST00000505074 OSTF1Q92882 214 aa14.28□□□□□ -0.12
PDLIM7-213ENST00000505074 ADGRG7Q96K78 797 aa14.28□□□□□ -0.12
PDLIM7-213ENST00000505074 KLHL15Q96M94 604 aa14.28□□□□□ -0.12
PDLIM7-213ENST00000505074 STACQ99469 402 aa14.28□□□□□ -0.12
PDLIM7-213ENST00000505074 PRPF18Q99633 342 aaKnown RBP14.28□□□□□ -0.12
PDLIM7-213ENST00000505074 TMEM204Q9BSN7 226 aa14.28□□□□□ -0.12
PDLIM7-213ENST00000505074 ACTRT3Q9BYD9 372 aa14.28□□□□□ -0.12
PDLIM7-213ENST00000505074 PIGUQ9H490 435 aa14.28□□□□□ -0.12
PDLIM7-213ENST00000505074 TIGARQ9NQ88 270 aa14.28□□□□□ -0.12
PDLIM7-213ENST00000505074 PLSCR4Q9NRQ2 329 aa14.28□□□□□ -0.12
PDLIM7-213ENST00000505074 DUSP22Q9NRW4 184 aa14.28□□□□□ -0.12
PDLIM7-213ENST00000505074 GLRX2Q9NS18 164 aa14.28□□□□□ -0.12
PDLIM7-213ENST00000505074 LPAR3Q9UBY5 353 aa14.28□□□□□ -0.12
PDLIM7-213ENST00000505074 YLPM1P49750 1951 aaKnown RBP14.27□□□□□ -0.12
PDLIM7-213ENST00000505074 A0A1W2PQD3 144 aa14.27□□□□□ -0.13
PDLIM7-213ENST00000505074 C7orf72A4D263 438 aa14.27□□□□□ -0.13
PDLIM7-213ENST00000505074 FGF4P08620 206 aa14.27□□□□□ -0.13
PDLIM7-213ENST00000505074 KRT16P08779 473 aa14.27□□□□□ -0.13
PDLIM7-213ENST00000505074 EIF1P41567 113 aaKnown RBP14.27□□□□□ -0.13
PDLIM7-213ENST00000505074 CCR4P51679 360 aa14.27□□□□□ -0.13
PDLIM7-213ENST00000505074 CARD18P57730 90 aa14.27□□□□□ -0.13
PDLIM7-213ENST00000505074 MLC1Q15049 377 aa14.27□□□□□ -0.13
PDLIM7-213ENST00000505074 LSM12Q3MHD2 195 aaKnown RBP14.27□□□□□ -0.13
PDLIM7-213ENST00000505074 UGT3A2Q3SY77 523 aa14.27□□□□□ -0.13
PDLIM7-213ENST00000505074 DCST2Q5T1A1 773 aa14.27□□□□□ -0.13
PDLIM7-213ENST00000505074 IL23RQ5VWK5 629 aa14.27□□□□□ -0.13
PDLIM7-213ENST00000505074 BEND4Q6ZU67 534 aa14.27□□□□□ -0.13
PDLIM7-213ENST00000505074 POC1BQ8TC44 478 aa14.27□□□□□ -0.13
PDLIM7-213ENST00000505074 ROBO4Q8WZ75 1007 aa14.27□□□□□ -0.13
PDLIM7-213ENST00000505074 OR5P2Q8WZ92 322 aa14.27□□□□□ -0.13
PDLIM7-213ENST00000505074 TUBGCP3Q96CW5 907 aa14.27□□□□□ -0.13
PDLIM7-213ENST00000505074 KCNK17Q96T54 332 aa14.27□□□□□ -0.13
PDLIM7-213ENST00000505074 KLHDC3Q9BQ90 382 aa14.27□□□□□ -0.13
PDLIM7-213ENST00000505074 ACTR6Q9GZN1 396 aa14.27□□□□□ -0.13
PDLIM7-213ENST00000505074 CXorf36Q9H7Y0 433 aa14.27□□□□□ -0.13
PDLIM7-213ENST00000505074 CARD8Q9Y2G2 431 aa14.27□□□□□ -0.13
PDLIM7-213ENST00000505074 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.27□□□□□ -0.132e-7■■■□□ 17.7
PDLIM7-213ENST00000505074 ADAMDEC1O15204 470 aa14.26□□□□□ -0.13
PDLIM7-213ENST00000505074 ADAM11O75078 769 aa14.26□□□□□ -0.13
PDLIM7-213ENST00000505074 LYPLA1O75608 230 aaPredicted RBP14.26□□□□□ -0.13
PDLIM7-213ENST00000505074 PABPC4LP0CB38 370 aaKnown RBP14.26□□□□□ -0.13
PDLIM7-213ENST00000505074 IL11P20809 199 aa14.26□□□□□ -0.13
PDLIM7-213ENST00000505074 PSMA4P25789 261 aaKnown RBP14.26□□□□□ -0.13
PDLIM7-213ENST00000505074 AGTR1P30556 359 aa14.26□□□□□ -0.13
PDLIM7-213ENST00000505074 PGS1Q32NB8 556 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms