RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 EMX2Q04743 252 aa11.73□□□□□ -0.53
DDX41-204ENST00000504807 EXOC3L2Q2M3D2 409 aa11.73□□□□□ -0.53
DDX41-204ENST00000504807 KRT71Q3SY84 523 aa11.73□□□□□ -0.53
DDX41-204ENST00000504807 PPP4R4Q6NUP7 873 aa11.73□□□□□ -0.53
DDX41-204ENST00000504807 ZCCHC12Q6PEW1 402 aa11.73□□□□□ -0.53
DDX41-204ENST00000504807 FAM214BQ7L5A3 538 aa11.73□□□□□ -0.53
DDX41-204ENST00000504807 CHMP1BQ7LBR1 199 aa11.73□□□□□ -0.53
DDX41-204ENST00000504807 HMGN2P46Q86SG4 172 aa11.73□□□□□ -0.53
DDX41-204ENST00000504807 NUDCD3Q8IVD9 361 aa11.73□□□□□ -0.53
DDX41-204ENST00000504807 OR2V1Q8NHB1 315 aa11.73□□□□□ -0.53
DDX41-204ENST00000504807 ACTRT2Q8TDY3 377 aa11.73□□□□□ -0.53
DDX41-204ENST00000504807 PIK3IP1Q96FE7 263 aa11.73□□□□□ -0.53
DDX41-204ENST00000504807 CHMP6Q96FZ7 201 aa11.73□□□□□ -0.53
DDX41-204ENST00000504807 ZC3HAV1LQ96H79 300 aaKnown RBP11.73□□□□□ -0.53
DDX41-204ENST00000504807 TEX37Q96LM6 180 aa11.73□□□□□ -0.53
DDX41-204ENST00000504807 DUSP26Q9BV47 211 aa11.73□□□□□ -0.53
DDX41-204ENST00000504807 ACTRT3Q9BYD9 372 aa11.73□□□□□ -0.53
DDX41-204ENST00000504807 ASIC5Q9NY37 505 aa11.73□□□□□ -0.53
DDX41-204ENST00000504807 A0A087WZY1 265 aa11.72□□□□□ -0.53
DDX41-204ENST00000504807 C9JVG2 144 aa11.72□□□□□ -0.53
DDX41-204ENST00000504807 SCDO00767 359 aa11.72□□□□□ -0.53
DDX41-204ENST00000504807 HSPA4LO95757 839 aa11.72□□□□□ -0.53
DDX41-204ENST00000504807 POU2F1P14859 743 aa11.72□□□□□ -0.53
DDX41-204ENST00000504807 MAPK1P28482 360 aa11.72□□□□□ -0.53
DDX41-204ENST00000504807 SFTPDP35247 375 aa11.72□□□□□ -0.53
DDX41-204ENST00000504807 SERPINB5P36952 375 aa11.72□□□□□ -0.53
DDX41-204ENST00000504807 EEFSECP57772 596 aaKnown RBP11.72□□□□□ -0.53
DDX41-204ENST00000504807 ABCE1P61221 599 aaKnown RBP11.72□□□□□ -0.53
DDX41-204ENST00000504807 RAC1P63000 192 aa11.72□□□□□ -0.53
DDX41-204ENST00000504807 RUNX1T1Q06455 604 aa11.72□□□□□ -0.53
DDX41-204ENST00000504807 TSC22D1Q15714 1073 aa11.72□□□□□ -0.53
DDX41-204ENST00000504807 MAPK14Q16539 360 aa11.72□□□□□ -0.53
DDX41-204ENST00000504807 SGCBQ16585 318 aa11.72□□□□□ -0.53
DDX41-204ENST00000504807 PGS1Q32NB8 556 aa11.72□□□□□ -0.53
DDX41-204ENST00000504807 STAC2Q6ZMT1 411 aa11.72□□□□□ -0.53
DDX41-204ENST00000504807 NUFIP2Q7Z417 695 aaKnown RBP11.72□□□□□ -0.53
DDX41-204ENST00000504807 ATG4DQ86TL0 474 aaPredicted RBP11.72□□□□□ -0.53
DDX41-204ENST00000504807 ANKRD46Q86W74 232 aa11.72□□□□□ -0.53
DDX41-204ENST00000504807 LILRA2Q8N149 483 aa11.72□□□□□ -0.53
DDX41-204ENST00000504807 FBXO27Q8NI29 283 aa11.72□□□□□ -0.53
DDX41-204ENST00000504807 PHOSPHO1Q8TCT1 267 aa11.72□□□□□ -0.53
DDX41-204ENST00000504807 GPR119Q8TDV5 335 aa11.72□□□□□ -0.53
DDX41-204ENST00000504807 ABHD3Q8WU67 409 aa11.72□□□□□ -0.53
DDX41-204ENST00000504807 ZBTB8AQ96BR9 441 aa11.72□□□□□ -0.53
DDX41-204ENST00000504807 ZIM3Q96PE6 472 aa11.72□□□□□ -0.53
DDX41-204ENST00000504807 SDF2Q99470 211 aa11.72□□□□□ -0.53
DDX41-204ENST00000504807 BHLHE41Q9C0J9 482 aaPredicted RBP11.72□□□□□ -0.53
DDX41-204ENST00000504807 PLSCR4Q9NRQ2 329 aa11.72□□□□□ -0.53
DDX41-204ENST00000504807 PNPOQ9NVS9 261 aa11.72□□□□□ -0.53
DDX41-204ENST00000504807 ING1Q9UK53 422 aaPredicted RBP11.72□□□□□ -0.53
DDX41-204ENST00000504807 PROCRQ9UNN8 238 aa11.72□□□□□ -0.53
DDX41-204ENST00000504807 CHD3Q12873 2000 aaKnown RBP11.72□□□□□ -0.53
DDX41-204ENST00000504807 IGHV3-15A0A0B4J1V0 119 aa11.71□□□□□ -0.53
DDX41-204ENST00000504807 KLF4O43474 513 aa11.71□□□□□ -0.53
DDX41-204ENST00000504807 ADAM11O75078 769 aa11.71□□□□□ -0.53
DDX41-204ENST00000504807 H6PDO95479 791 aa11.71□□□□□ -0.53
DDX41-204ENST00000504807 PLAUP00749 431 aa11.71□□□□□ -0.53
DDX41-204ENST00000504807 SERPINE1P05121 402 aa11.71□□□□□ -0.53
DDX41-204ENST00000504807 ALDOCP09972 364 aaKnown RBP11.71□□□□□ -0.53
DDX41-204ENST00000504807 PRKCAP17252 672 aa11.71□□□□□ -0.53
DDX41-204ENST00000504807 PRPS1L1P21108 318 aa11.71□□□□□ -0.53
DDX41-204ENST00000504807 IL12AP29459 219 aa11.71□□□□□ -0.53
DDX41-204ENST00000504807 AGTR1P30556 359 aa11.71□□□□□ -0.53
DDX41-204ENST00000504807 LCN1P31025 176 aa11.71□□□□□ -0.53
DDX41-204ENST00000504807 SOAT1P35610 550 aa11.71□□□□□ -0.53
DDX41-204ENST00000504807 PCYT1AP49585 367 aa11.71□□□□□ -0.53
DDX41-204ENST00000504807 ZNF41P51814 821 aaPredicted RBP11.71□□□□□ -0.53
DDX41-204ENST00000504807 OCRLQ01968 901 aa11.71□□□□□ -0.53
DDX41-204ENST00000504807 ZNF239Q16600 458 aaKnown RBP11.71□□□□□ -0.53
DDX41-204ENST00000504807 SPDYE7PQ495Y7 208 aa11.71□□□□□ -0.53
DDX41-204ENST00000504807 PDZK1Q5T2W1 519 aa11.71□□□□□ -0.53
DDX41-204ENST00000504807 HBMQ6B0K9 141 aa11.71□□□□□ -0.53
DDX41-204ENST00000504807 WDR75Q8IWA0 830 aaKnown RBP11.71□□□□□ -0.53
DDX41-204ENST00000504807 OR56A1Q8NGH5 318 aa11.71□□□□□ -0.53
DDX41-204ENST00000504807 PPP1R14CQ8TAE6 165 aa11.71□□□□□ -0.53
DDX41-204ENST00000504807 SFXN5Q8TD22 340 aa11.71□□□□□ -0.53
DDX41-204ENST00000504807 ADAMTS15Q8TE58 950 aa11.71□□□□□ -0.53
DDX41-204ENST00000504807 OSTF1Q92882 214 aa11.71□□□□□ -0.53
DDX41-204ENST00000504807 ZG16BQ96DA0 208 aa11.71□□□□□ -0.53
DDX41-204ENST00000504807 DTNBP1Q96EV8 351 aa11.71□□□□□ -0.53
DDX41-204ENST00000504807 KLHL15Q96M94 604 aa11.71□□□□□ -0.53
DDX41-204ENST00000504807 KLHL4Q9C0H6 718 aa11.71□□□□□ -0.53
DDX41-204ENST00000504807 QRSL1Q9H0R6 528 aaKnown RBP11.71□□□□□ -0.53
DDX41-204ENST00000504807 ELOVL5Q9NYP7 299 aa11.71□□□□□ -0.53
DDX41-204ENST00000504807 HAO1Q9UJM8 370 aa11.71□□□□□ -0.53
DDX41-204ENST00000504807 RAB21Q9UL25 225 aa11.71□□□□□ -0.53
DDX41-204ENST00000504807 ARID1AO14497 2285 aa11.7□□□□□ -0.54
DDX41-204ENST00000504807 A0A1W2PNR3 127 aa11.7□□□□□ -0.54
DDX41-204ENST00000504807 C16orf97H3BN30 126 aa11.7□□□□□ -0.54
DDX41-204ENST00000504807 ZNF195O14628 629 aa11.7□□□□□ -0.54
DDX41-204ENST00000504807 CFLARO15519 480 aa11.7□□□□□ -0.54
DDX41-204ENST00000504807 UGT2B17O75795 530 aa11.7□□□□□ -0.54
DDX41-204ENST00000504807 ENPP1P22413 925 aa11.7□□□□□ -0.54
DDX41-204ENST00000504807 KCNJ5P48544 419 aa11.7□□□□□ -0.54
DDX41-204ENST00000504807 P2RX1P51575 399 aa11.7□□□□□ -0.54
DDX41-204ENST00000504807 ATP12AP54707 1039 aa11.7□□□□□ -0.54
DDX41-204ENST00000504807 WDR4P57081 412 aaKnown RBP11.7□□□□□ -0.54
DDX41-204ENST00000504807 RPS3AP61247 264 aaKnown RBP11.7□□□□□ -0.54
DDX41-204ENST00000504807 EEF1A1P68104 462 aaKnown RBP11.7□□□□□ -0.54
DDX41-204ENST00000504807 SKP2Q13309 424 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms