RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 TMEM132DQ14C87 1099 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 PPP1R3AQ16821 1122 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 ARMCX4Q5H9R4 360 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 TCHHL1Q5QJ38 904 aaPredicted RBP4.67□□□□□ -1.66
NIPBL-204ENST00000504430 VWA1Q6PCB0 445 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 SLC51BQ86UW2 128 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 ZNF548Q8NEK5 533 aaPredicted RBP4.67□□□□□ -1.66
NIPBL-204ENST00000504430 OR2L5Q8NG80 312 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 OR4C15Q8NGM1 316 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 RP9Q8TA86 221 aaKnown RBP4.67□□□□□ -1.66
NIPBL-204ENST00000504430 MAGEC3Q8TD91 643 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 TMEM18Q96B42 140 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 PAPOLGQ9BWT3 736 aaKnown RBP4.67□□□□□ -1.66
NIPBL-204ENST00000504430 BCL2L14Q9BZR8 327 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 METTL9Q9H1A3 318 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 GANQ9H2C0 597 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 NOX4Q9NPH5 578 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 FGF21Q9NSA1 209 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 MIOSQ9NXC5 875 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 GPR83Q9NYM4 423 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 SIGLEC8Q9NYZ4 499 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 RCC2Q9P258 522 aaKnown RBP4.67□□□□□ -1.66
NIPBL-204ENST00000504430 ZNF490Q9ULM2 529 aaPredicted RBP4.67□□□□□ -1.66
NIPBL-204ENST00000504430 LAMP3Q9UQV4 416 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 FHAD1B1AJZ9 1412 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 TRAV24A0A0B4J272 114 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 PPIAL4CA0A0B4J2A2 164 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 FAM90A26D6RGX4 464 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 RNASEK-C17orf49H0YIS7 233 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 PPIAL4GP0DN37 164 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 HTR2CP28335 458 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 SSTR4P31391 388 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 CD79BP40259 229 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 XGP55808 180 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 PHEXP78562 749 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 SPDYE7PQ495Y7 208 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 OTUD3Q5T2D3 398 aaPredicted RBP4.67□□□□□ -1.66
NIPBL-204ENST00000504430 CD300LGQ6UXG3 332 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 UNQ6126/PRO20091Q6UXV3 157 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 ZNF562Q6V9R5 426 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 CYS1Q717R9 158 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 NUFIP2Q7Z417 695 aaKnown RBP4.67□□□□□ -1.66
NIPBL-204ENST00000504430 WDR53Q7Z5U6 358 aaPredicted RBP4.67□□□□□ -1.66
NIPBL-204ENST00000504430 CNIH3Q8TBE1 160 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 MTERF3Q96E29 417 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 RNF145Q96MT1 663 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 CSF3RQ99062 836 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 P2RY13Q9BPV8 354 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 TMEM39BQ9GZU3 492 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 NLE1Q9NVX2 485 aaPredicted RBP4.67□□□□□ -1.66
NIPBL-204ENST00000504430 ZNHIT2Q9UHR6 403 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 PDE10AQ9Y233 779 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 CCSO14618 274 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 ATP8B1O43520 1251 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 GATCO43716 136 aaKnown RBP4.67□□□□□ -1.66
NIPBL-204ENST00000504430 APOEP02649 317 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 NHLRC4P0CG21 123 aaPredicted RBP4.67□□□□□ -1.66
NIPBL-204ENST00000504430 FOSL2P15408 326 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 NDUFB7P17568 137 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 MAS1LP35410 378 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 LBX1P52954 281 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 RPS4XP62701 263 aaKnown RBP4.67□□□□□ -1.66
NIPBL-204ENST00000504430 NR1D2Q14995 579 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 BEAN1Q3B7T3 259 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 ULK3Q6PHR2 472 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 USP43Q70EL4 1123 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 HIPK1Q86Z02 1210 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 SLC38A9Q8NBW4 561 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 OR5AU1Q8NGC0 362 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 FGFBP3Q8TAT2 258 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 TM9SF4Q92544 642 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 ISOC2Q96AB3 205 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 FAM131CQ96AQ9 280 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 EPYCQ99645 322 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 TIMM29Q9BSF4 260 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 THAP7Q9BT49 309 aaPredicted RBP4.67□□□□□ -1.66
NIPBL-204ENST00000504430 CNGB3Q9NQW8 809 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 DIABLOQ9NR28 239 aa4.67□□□□□ -1.66
NIPBL-204ENST00000504430 LRPPRCP42704 1394 aaKnown RBP4.66□□□□□ -1.66
NIPBL-204ENST00000504430 TVP23AA6NH52 213 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 TMEM150CB9EJG8 249 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 SMIM22K7EJ46 135 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 SULT1C2O00338 296 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 EMC8O43402 210 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 ZNF43P17038 809 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 MAOAP21397 527 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 STX2P32856 288 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 FEN1P39748 380 aaKnown RBP4.66□□□□□ -1.66
NIPBL-204ENST00000504430 P2RY1P47900 373 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 RPL14P50914 215 aaKnown RBP4.66□□□□□ -1.66
NIPBL-204ENST00000504430 FGD3Q5JSP0 725 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 ENPP6Q6UWR7 440 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 SLC16A14Q7RTX9 510 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 LGI2Q8N0V4 545 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 C1orf52Q8N6N3 182 aaKnown RBP4.66□□□□□ -1.66
NIPBL-204ENST00000504430 RNF128Q8TEB7 428 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 OR5B2Q96R09 309 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 NEURL2Q9BR09 285 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 NICN1Q9BSH3 213 aa4.66□□□□□ -1.66
NIPBL-204ENST00000504430 MEGF9Q9H1U4 602 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms