RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-209ENST00000504157 AVPI1Q5T686 147 aa16.63■□□□□ 0.25
POLR2J3-209ENST00000504157 AADACL4Q5VUY2 407 aa16.63■□□□□ 0.25
POLR2J3-209ENST00000504157 RSPO2Q6UXX9 243 aaPredicted RBP16.63■□□□□ 0.25
POLR2J3-209ENST00000504157 TBC1D19Q8N5T2 526 aa16.63■□□□□ 0.25
POLR2J3-209ENST00000504157 OR14A16Q8NHC5 309 aa16.63■□□□□ 0.25
POLR2J3-209ENST00000504157 THEM6Q8WUY1 208 aa16.63■□□□□ 0.25
POLR2J3-209ENST00000504157 NEIL2Q969S2 332 aa16.63■□□□□ 0.25
POLR2J3-209ENST00000504157 WBP2Q969T9 261 aa16.63■□□□□ 0.25
POLR2J3-209ENST00000504157 ECHDC3Q96DC8 303 aa16.63■□□□□ 0.25
POLR2J3-209ENST00000504157 WFDC6Q9BQY6 131 aa16.63■□□□□ 0.25
POLR2J3-209ENST00000504157 GSDMCQ9BYG8 508 aa16.63■□□□□ 0.25
POLR2J3-209ENST00000504157 ELAC1Q9H777 363 aaKnown RBP16.63■□□□□ 0.25
POLR2J3-209ENST00000504157 NFKBIL1Q9UBC1 381 aaPredicted RBP16.63■□□□□ 0.25
POLR2J3-209ENST00000504157 PGRMC2O15173 223 aa16.62■□□□□ 0.25
POLR2J3-209ENST00000504157 SPDEFO95238 335 aa16.62■□□□□ 0.25
POLR2J3-209ENST00000504157 GBAP04062 536 aa16.62■□□□□ 0.25
POLR2J3-209ENST00000504157 RB1P06400 928 aa16.62■□□□□ 0.25
POLR2J3-209ENST00000504157 TNFAIP8L2Q6P589 184 aaPredicted RBP16.62■□□□□ 0.25
POLR2J3-209ENST00000504157 FAM83HQ6ZRV2 1179 aaPredicted RBP16.62■□□□□ 0.25
POLR2J3-209ENST00000504157 CBLN2Q8IUK8 224 aa16.62■□□□□ 0.25
POLR2J3-209ENST00000504157 SERPINA12Q8IW75 414 aa16.62■□□□□ 0.25
POLR2J3-209ENST00000504157 ARMC10Q8N2F6 343 aa16.62■□□□□ 0.25
POLR2J3-209ENST00000504157 PLEKHA1Q9HB21 404 aa16.62■□□□□ 0.25
POLR2J3-209ENST00000504157 NPFFR2Q9Y5X5 522 aa16.62■□□□□ 0.25
POLR2J3-209ENST00000504157 BACE2Q9Y5Z0 518 aa16.62■□□□□ 0.25
POLR2J3-209ENST00000504157 SIRT4Q9Y6E7 314 aaPredicted RBP16.62■□□□□ 0.25
POLR2J3-209ENST00000504157 CENPFP49454 3210 aa16.62■□□□□ 0.25
POLR2J3-209ENST00000504157 FXYD6-FXYD2A0A087WZ82 144 aa16.62■□□□□ 0.25
POLR2J3-209ENST00000504157 ANHXE9PGG2 379 aa16.62■□□□□ 0.25
POLR2J3-209ENST00000504157 NPC1O15118 1278 aa16.62■□□□□ 0.25
POLR2J3-209ENST00000504157 ST8SIA5O15466 376 aa16.62■□□□□ 0.25
POLR2J3-209ENST00000504157 RAD1O60671 282 aa16.62■□□□□ 0.25
POLR2J3-209ENST00000504157 HTR3BO95264 441 aa16.62■□□□□ 0.25
POLR2J3-209ENST00000504157 SLC16A8O95907 504 aa16.62■□□□□ 0.25
POLR2J3-209ENST00000504157 CRYBA1P05813 215 aa16.62■□□□□ 0.25
POLR2J3-209ENST00000504157 IL3P08700 152 aa16.62■□□□□ 0.25
POLR2J3-209ENST00000504157 SAGP10523 405 aaPredicted RBP16.62■□□□□ 0.25
POLR2J3-209ENST00000504157 SPI1P17947 270 aa16.62■□□□□ 0.25
POLR2J3-209ENST00000504157 CD53P19397 219 aa16.62■□□□□ 0.25
POLR2J3-209ENST00000504157 MECP2P51608 486 aaKnown RBP16.62■□□□□ 0.25
POLR2J3-209ENST00000504157 CCL23P55773 120 aa16.62■□□□□ 0.25
POLR2J3-209ENST00000504157 DLX5P56178 289 aa16.62■□□□□ 0.25
POLR2J3-209ENST00000504157 STX4Q12846 297 aa16.62■□□□□ 0.25
POLR2J3-209ENST00000504157 TMPRSS11BQ86T26 416 aa16.62■□□□□ 0.25
POLR2J3-209ENST00000504157 KRT78Q8N1N4 520 aa16.62■□□□□ 0.25
POLR2J3-209ENST00000504157 PIGKQ92643 395 aa16.62■□□□□ 0.25
POLR2J3-209ENST00000504157 TMEM169Q96HH4 297 aa16.62■□□□□ 0.25
POLR2J3-209ENST00000504157 PRRC1Q96M27 445 aa16.62■□□□□ 0.25
POLR2J3-209ENST00000504157 FXYD6Q9H0Q3 95 aa16.62■□□□□ 0.25
POLR2J3-209ENST00000504157 NEUROD4Q9HD90 331 aa16.62■□□□□ 0.25
POLR2J3-209ENST00000504157 PRM3Q9NNZ6 103 aa16.62■□□□□ 0.25
POLR2J3-209ENST00000504157 NIT2Q9NQR4 276 aa16.62■□□□□ 0.25
POLR2J3-209ENST00000504157 SLC22A11Q9NSA0 550 aa16.62■□□□□ 0.25
POLR2J3-209ENST00000504157 MED17Q9NVC6 651 aa16.62■□□□□ 0.25
POLR2J3-209ENST00000504157 ENTPD4Q9Y227 616 aa16.62■□□□□ 0.25
POLR2J3-209ENST00000504157 HMGN4O00479 90 aa16.61■□□□□ 0.25
POLR2J3-209ENST00000504157 ZNF821O75541 412 aaPredicted RBP16.61■□□□□ 0.25
POLR2J3-209ENST00000504157 EGFP01133 1207 aa16.61■□□□□ 0.25
POLR2J3-209ENST00000504157 IGHV2-70P01814 119 aa16.61■□□□□ 0.25
POLR2J3-209ENST00000504157 GP1BAP07359 652 aa16.61■□□□□ 0.25
POLR2J3-209ENST00000504157 CNR1P21554 472 aa16.61■□□□□ 0.25
POLR2J3-209ENST00000504157 SPINT3P49223 89 aa16.61■□□□□ 0.25
POLR2J3-209ENST00000504157 MLLT1Q03111 559 aaPredicted RBP16.61■□□□□ 0.25
POLR2J3-209ENST00000504157 FAM27D1Q5T7N8 215 aa16.61■□□□□ 0.25
POLR2J3-209ENST00000504157 HES5Q5TA89 166 aa16.61■□□□□ 0.25
POLR2J3-209ENST00000504157 PRAMEF13Q5VWM6 474 aa16.61■□□□□ 0.25
POLR2J3-209ENST00000504157 RFLNAQ6ZTI6 216 aa16.61■□□□□ 0.25
POLR2J3-209ENST00000504157 PRSS45Q7RTY3 260 aa16.61■□□□□ 0.25
POLR2J3-209ENST00000504157 SPAG16Q8N0X2 631 aa16.61■□□□□ 0.25
POLR2J3-209ENST00000504157 C2CD4CQ8TF44 421 aa16.61■□□□□ 0.25
POLR2J3-209ENST00000504157 CRB3Q9BUF7 120 aa16.61■□□□□ 0.25
POLR2J3-209ENST00000504157 ENKD1Q9H0I2 346 aa16.61■□□□□ 0.25
POLR2J3-209ENST00000504157 PIGMQ9H3S5 423 aa16.61■□□□□ 0.25
POLR2J3-209ENST00000504157 AUNIPQ9H7T9 357 aa16.61■□□□□ 0.25
POLR2J3-209ENST00000504157 NOX3Q9HBY0 568 aa16.61■□□□□ 0.25
POLR2J3-209ENST00000504157 MIEF1Q9NQG6 463 aa16.61■□□□□ 0.25
POLR2J3-209ENST00000504157 DCAF16Q9NXF7 216 aa16.61■□□□□ 0.25
POLR2J3-209ENST00000504157 RCE1Q9Y256 329 aa16.61■□□□□ 0.25
POLR2J3-209ENST00000504157 DOCK3Q8IZD9 2030 aa16.61■□□□□ 0.25
POLR2J3-209ENST00000504157 HELZP42694 1942 aaKnown RBP16.61■□□□□ 0.25
POLR2J3-209ENST00000504157 SCAMP1O15126 338 aa16.61■□□□□ 0.25
POLR2J3-209ENST00000504157 IRF1P10914 325 aa16.61■□□□□ 0.25
POLR2J3-209ENST00000504157 RPA2P15927 270 aa16.61■□□□□ 0.25
POLR2J3-209ENST00000504157 TYRP1P17643 537 aa16.61■□□□□ 0.25
POLR2J3-209ENST00000504157 CTGFP29279 349 aa16.61■□□□□ 0.25
POLR2J3-209ENST00000504157 RPS26P62854 115 aaKnown RBP16.61■□□□□ 0.25
POLR2J3-209ENST00000504157 CNTN1Q12860 1018 aa16.61■□□□□ 0.25
POLR2J3-209ENST00000504157 SNTB1Q13884 538 aaKnown RBP16.61■□□□□ 0.25
POLR2J3-209ENST00000504157 WFDC5Q8TCV5 224 aa16.61■□□□□ 0.25
POLR2J3-209ENST00000504157 EDARADDQ8WWZ3 215 aa16.61■□□□□ 0.25
POLR2J3-209ENST00000504157 GPR62Q9BZJ7 368 aa16.61■□□□□ 0.25
POLR2J3-209ENST00000504157 EGLN3Q9H6Z9 239 aa16.61■□□□□ 0.25
POLR2J3-209ENST00000504157 AKAP7Q9P0M2 348 aaPredicted RBP16.61■□□□□ 0.25
POLR2J3-209ENST00000504157 ABRACLQ9P1F3 81 aa16.61■□□□□ 0.25
POLR2J3-209ENST00000504157 CLEC4AQ9UMR7 237 aa16.61■□□□□ 0.25
POLR2J3-209ENST00000504157 TMEM218A2RU14 115 aa16.6■□□□□ 0.25
POLR2J3-209ENST00000504157 OR6C68A6NDL8 312 aa16.6■□□□□ 0.25
POLR2J3-209ENST00000504157 KLK1P06870 262 aa16.6■□□□□ 0.25
POLR2J3-209ENST00000504157 UBBP0CG47 229 aa16.6■□□□□ 0.25
POLR2J3-209ENST00000504157 UBCP0CG48 685 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms