RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 DEFB113Q30KQ7 82 aa10.71□□□□□ -0.69
MED28-203ENST00000503945 TMEM176BQ3YBM2 270 aaPredicted RBP10.71□□□□□ -0.69
MED28-203ENST00000503945 HHATQ5VTY9 493 aa10.71□□□□□ -0.69
MED28-203ENST00000503945 OR4F3Q6IEY1 312 aa10.71□□□□□ -0.69
MED28-203ENST00000503945 CBLN3Q6UW01 205 aa10.71□□□□□ -0.69
MED28-203ENST00000503945 BEND4Q6ZU67 534 aa10.71□□□□□ -0.69
MED28-203ENST00000503945 STK32CQ86UX6 486 aa10.71□□□□□ -0.69
MED28-203ENST00000503945 ZNF614Q8N883 585 aa10.71□□□□□ -0.69
MED28-203ENST00000503945 OR8J2Q8NGG1 315 aa10.71□□□□□ -0.69
MED28-203ENST00000503945 OR6K3Q8NGY3 331 aa10.71□□□□□ -0.69
MED28-203ENST00000503945 OR5AK3PQ8NH89 298 aa10.71□□□□□ -0.69
MED28-203ENST00000503945 FBXO27Q8NI29 283 aa10.71□□□□□ -0.69
MED28-203ENST00000503945 POC1BQ8TC44 478 aa10.71□□□□□ -0.69
MED28-203ENST00000503945 GPR119Q8TDV5 335 aa10.71□□□□□ -0.69
MED28-203ENST00000503945 ADGRG7Q96K78 797 aa10.71□□□□□ -0.69
MED28-203ENST00000503945 KLHL15Q96M94 604 aa10.71□□□□□ -0.69
MED28-203ENST00000503945 C20orf27Q9GZN8 174 aa10.71□□□□□ -0.69
MED28-203ENST00000503945 TMEM185BQ9H7F4 350 aa10.71□□□□□ -0.69
MED28-203ENST00000503945 EXD2Q9NVH0 621 aa10.71□□□□□ -0.69
MED28-203ENST00000503945 C6orf203Q9P0P8 240 aaPredicted RBP10.71□□□□□ -0.69
MED28-203ENST00000503945 RAB21Q9UL25 225 aa10.71□□□□□ -0.69
MED28-203ENST00000503945 ICAM5Q9UMF0 924 aa10.71□□□□□ -0.69
MED28-203ENST00000503945 TESMINQ9Y4I5 508 aa10.71□□□□□ -0.69
MED28-203ENST00000503945 ACTL7BQ9Y614 415 aa10.71□□□□□ -0.69
MED28-203ENST00000503945 ABCA2Q9BZC7 2435 aa10.7□□□□□ -0.7
MED28-203ENST00000503945 EXPH5Q8NEV8 1989 aa10.7□□□□□ -0.7
MED28-203ENST00000503945 ZNF264O43296 627 aa10.7□□□□□ -0.7
MED28-203ENST00000503945 PRKD3O94806 890 aa10.7□□□□□ -0.7
MED28-203ENST00000503945 CPSF4O95639 269 aaKnown RBP10.7□□□□□ -0.7
MED28-203ENST00000503945 AGR2O95994 175 aa10.7□□□□□ -0.7
MED28-203ENST00000503945 AK1P00568 194 aa10.7□□□□□ -0.7
MED28-203ENST00000503945 DHRS4L1P0CG22 281 aa10.7□□□□□ -0.7
MED28-203ENST00000503945 PPP3CBP16298 524 aa10.7□□□□□ -0.7
MED28-203ENST00000503945 LBPP18428 481 aa10.7□□□□□ -0.7
MED28-203ENST00000503945 BGNP21810 368 aa10.7□□□□□ -0.7
MED28-203ENST00000503945 UQCRC2P22695 453 aa10.7□□□□□ -0.7
MED28-203ENST00000503945 HOXC12P31275 282 aa10.7□□□□□ -0.7
MED28-203ENST00000503945 SFTPDP35247 375 aa10.7□□□□□ -0.7
MED28-203ENST00000503945 SUMO3P55854 103 aaPredicted RBP10.7□□□□□ -0.7
MED28-203ENST00000503945 CBFBQ13951 182 aa10.7□□□□□ -0.7
MED28-203ENST00000503945 GUSBP1Q15486 140 aa10.7□□□□□ -0.7
MED28-203ENST00000503945 GPR68Q15743 365 aa10.7□□□□□ -0.7
MED28-203ENST00000503945 CTU2Q2VPK5 515 aaKnown RBP10.7□□□□□ -0.7
MED28-203ENST00000503945 TMEM201Q5SNT2 666 aa10.7□□□□□ -0.7
MED28-203ENST00000503945 ATAD3BQ5T9A4 648 aa10.7□□□□□ -0.7
MED28-203ENST00000503945 ANKRD34AQ69YU3 496 aa10.7□□□□□ -0.7
MED28-203ENST00000503945 C16orf62Q7Z3J2 963 aa10.7□□□□□ -0.7
MED28-203ENST00000503945 LRRC34Q8IZ02 419 aa10.7□□□□□ -0.7
MED28-203ENST00000503945 ATP6V1C2Q8NEY4 427 aa10.7□□□□□ -0.7
MED28-203ENST00000503945 TOR1AIP2Q8NFQ8 470 aa10.7□□□□□ -0.7
MED28-203ENST00000503945 OR5D16Q8NGK9 328 aa10.7□□□□□ -0.7
MED28-203ENST00000503945 OR4A15Q8NGL6 344 aa10.7□□□□□ -0.7
MED28-203ENST00000503945 OR5W2Q8NH69 310 aa10.7□□□□□ -0.7
MED28-203ENST00000503945 RFWD2Q8NHY2 731 aa10.7□□□□□ -0.7
MED28-203ENST00000503945 XAGE5Q8WWM1 108 aa10.7□□□□□ -0.7
MED28-203ENST00000503945 ROBO4Q8WZ75 1007 aa10.7□□□□□ -0.7
MED28-203ENST00000503945 PIGTQ969N2 578 aa10.7□□□□□ -0.7
MED28-203ENST00000503945 PIK3IP1Q96FE7 263 aa10.7□□□□□ -0.7
MED28-203ENST00000503945 ZC3HAV1LQ96H79 300 aaKnown RBP10.7□□□□□ -0.7
MED28-203ENST00000503945 MRGPRX4Q96LA9 322 aa10.7□□□□□ -0.7
MED28-203ENST00000503945 NPAS1Q99742 590 aa10.7□□□□□ -0.7
MED28-203ENST00000503945 HDHD5Q9BXW7 423 aa10.7□□□□□ -0.7
MED28-203ENST00000503945 NUF2Q9BZD4 464 aa10.7□□□□□ -0.7
MED28-203ENST00000503945 CLEC4AQ9UMR7 237 aa10.7□□□□□ -0.7
MED28-203ENST00000503945 DNHD1Q96M86 4753 aa10.7□□□□□ -0.7
MED28-203ENST00000503945 MED12LQ86YW9 2145 aa10.7□□□□□ -0.7
MED28-203ENST00000503945 NPIPA5A0A0B4J1W7 369 aa10.69□□□□□ -0.7
MED28-203ENST00000503945 SERINC4A6NH21 518 aa10.69□□□□□ -0.7
MED28-203ENST00000503945 NPIPA7E9PJI5 369 aa10.69□□□□□ -0.7
MED28-203ENST00000503945 ARHGEF9O43307 516 aa10.69□□□□□ -0.7
MED28-203ENST00000503945 EFNA2O43921 213 aa10.69□□□□□ -0.7
MED28-203ENST00000503945 FCMRO60667 390 aa10.69□□□□□ -0.7
MED28-203ENST00000503945 SS18L1O75177 396 aaPredicted RBP10.69□□□□□ -0.7
MED28-203ENST00000503945 CYP7B1O75881 506 aa10.69□□□□□ -0.7
MED28-203ENST00000503945 NPIPA8P0DM63 369 aa10.69□□□□□ -0.7
MED28-203ENST00000503945 FPR1P21462 350 aa10.69□□□□□ -0.7
MED28-203ENST00000503945 CRYGSP22914 178 aa10.69□□□□□ -0.7
MED28-203ENST00000503945 ELK4P28324 431 aa10.69□□□□□ -0.7
MED28-203ENST00000503945 S100A3P33764 101 aa10.69□□□□□ -0.7
MED28-203ENST00000503945 RNF144AP50876 292 aaPredicted RBP10.69□□□□□ -0.7
MED28-203ENST00000503945 CLNS1AP54105 237 aaKnown RBP10.69□□□□□ -0.7
MED28-203ENST00000503945 RPS26P62854 115 aaKnown RBP10.69□□□□□ -0.7
MED28-203ENST00000503945 MPP2Q14168 576 aa10.69□□□□□ -0.7
MED28-203ENST00000503945 RNPS1Q15287 305 aaKnown RBP10.69□□□□□ -0.7
MED28-203ENST00000503945 ARHGAP11BQ3KRB8 267 aa10.69□□□□□ -0.7
MED28-203ENST00000503945 TNFAIP8L3Q5GJ75 292 aa10.69□□□□□ -0.7
MED28-203ENST00000503945 EIF3MQ7L2H7 374 aaKnown RBP10.69□□□□□ -0.7
MED28-203ENST00000503945 BIVMQ86UB2 503 aa10.69□□□□□ -0.7
MED28-203ENST00000503945 CLECL1Q8IZS7 167 aa10.69□□□□□ -0.7
MED28-203ENST00000503945 CLEC4FQ8N1N0 589 aa10.69□□□□□ -0.7
MED28-203ENST00000503945 CPNE4Q96A23 557 aaPredicted RBP10.69□□□□□ -0.7
MED28-203ENST00000503945 ZBTB9Q96C00 473 aa10.69□□□□□ -0.7
MED28-203ENST00000503945 C18orf12Q96KH6 178 aa10.69□□□□□ -0.7
MED28-203ENST00000503945 SORT1Q99523 831 aa10.69□□□□□ -0.7
MED28-203ENST00000503945 NMUR2Q9GZQ4 415 aa10.69□□□□□ -0.7
MED28-203ENST00000503945 LAT2Q9GZY6 243 aa10.69□□□□□ -0.7
MED28-203ENST00000503945 SERINC1Q9NRX5 453 aa10.69□□□□□ -0.7
MED28-203ENST00000503945 PNPOQ9NVS9 261 aa10.69□□□□□ -0.7
MED28-203ENST00000503945 BEX4Q9NWD9 120 aaPredicted RBP10.69□□□□□ -0.7
MED28-203ENST00000503945 MKLN1Q9UL63 735 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms