RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 PLIN3O60664 434 aa5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 CYTIPO60759 359 aa5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 AK1P00568 194 aa5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 PLAUP00749 431 aa5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 HMGN2P05204 90 aaKnown RBP5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 SOD3P08294 240 aa5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 ACP2P11117 423 aa5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 PRKCAP17252 672 aa5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 SDC1P18827 310 aa5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 MAPK1P28482 360 aa5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 GPC1P35052 558 aa5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 SERPINB5P36952 375 aa5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 CLK1P49759 484 aaKnown RBP5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 MAP2K6P52564 334 aa5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 ATP12AP54707 1039 aa5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 POU6F2P78424 691 aaPredicted RBP5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 ZNF117Q03924 483 aa5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 BTKQ06187 659 aa5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 HSPB3Q12988 150 aa5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 EXOC3L2Q2M3D2 409 aa5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 PGGHGQ32M88 737 aa5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 ELOA3BQ3SY89 546 aa5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 RFTN2Q52LD8 501 aaPredicted RBP5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 ZNF385BQ569K4 471 aa5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 LIPMQ5VYY2 423 aa5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 KANK2Q63ZY3 851 aa5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 ANKRD34AQ69YU3 496 aa5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 CDC73Q6P1J9 531 aa5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 BHLHB9Q6PI77 547 aa5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 FIGNL1Q6PIW4 674 aa5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 FCRLAQ7L513 359 aa5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 ZNF551Q7Z340 670 aaPredicted RBP5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 COX18Q8N8Q8 333 aa5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 NOA1Q8NC60 698 aaKnown RBP5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 ELOA3Q8NG57 546 aa5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 OR10H5Q8NGA6 315 aa5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 OR56A1Q8NGH5 318 aa5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 SFXN5Q8TD22 340 aa5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 SLC25A43Q8WUT9 341 aaPredicted RBP5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 IFT81Q8WYA0 676 aa5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 ST8SIA1Q92185 356 aa5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 SLC9A6Q92581 669 aa5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 KISS1RQ969F8 398 aaPredicted RBP5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 COQ8BQ96D53 544 aa5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 FAM120BQ96EK7 910 aaKnown RBP5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 ZIM3Q96PE6 472 aa5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 PSD2Q9BQI7 771 aa5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 TRAF4Q9BUZ4 470 aaPredicted RBP5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 ACTRT3Q9BYD9 372 aa5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 NMUR2Q9GZQ4 415 aa5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 COQ10BQ9H8M1 238 aa5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 SIRT3Q9NTG7 399 aaPredicted RBP5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 ATAD3AQ9NVI7 634 aa5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 MKS1Q9NXB0 559 aa5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 ING1Q9UK53 422 aaPredicted RBP5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 DTNAQ9Y4J8 743 aa5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 DNAJC15Q9Y5T4 150 aa5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.42□□□□□ -1.54
LSM3P4-201ENST00000502948 NUP214P35658 2090 aaPredicted RBP5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 A0A096LNT2 108 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 A0A1W2PP18 115 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 ESPNB1AK53 854 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 ZNF814B7Z6K7 855 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 SHISA8B8ZZ34 492 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 H7C417 338 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 ZNF195O14628 629 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 SCAMP2O15127 329 aaKnown RBP5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 ZNF264O43296 627 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 NPHS1O60500 1241 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 TRIM13O60858 407 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 CRCPO75575 148 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 CHEK2O96017 543 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 F12P00748 615 aaPredicted RBP5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 IGHV4-39P01824 125 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 TP53P04637 393 aaPredicted RBP5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 CPA3P15088 417 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 SLC25A16P16260 332 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 ATP6V1C1P21283 382 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 TCEA1P23193 301 aaKnown RBP5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 IL32P24001 234 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 PTAFRP25105 342 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 SLC16A1P53985 500 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 BSPH1Q075Z2 132 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 LOXL1Q08397 574 aaPredicted RBP5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 CD226Q15762 336 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 ZNF141Q15928 474 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 SMU1Q2TAY7 513 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 LSM12Q3MHD2 195 aaKnown RBP5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 UGT3A2Q3SY77 523 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 XKR7Q5GH72 579 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 CFAP157Q5JU67 520 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 AGAP6Q5VW22 663 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 ZNF544Q6NX49 715 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 C3orf33Q6P1S2 294 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 CBLN3Q6UW01 205 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 WFDC8Q8IUA0 241 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 TUSC5Q8IXB3 177 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 LRRC34Q8IZ02 419 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 CCNYL1Q8N7R7 359 aa5.41□□□□□ -1.54
LSM3P4-201ENST00000502948 CEP112Q8N8E3 955 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms