RNA–Protein interactions for RNA: ENST00000502557.5

CCHCR1-216, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-216ENST00000502557 CCR4P51679 360 aa16.13■□□□□ 0.17
CCHCR1-216ENST00000502557 EEF1A1P68104 462 aaKnown RBP16.13■□□□□ 0.17
CCHCR1-216ENST00000502557 MRPL2Q5T653 305 aaKnown RBP16.13■□□□□ 0.17
CCHCR1-216ENST00000502557 C8orf82Q6P1X6 216 aaPredicted RBP16.13■□□□□ 0.17
CCHCR1-216ENST00000502557 AAGABQ6PD74 315 aa16.13■□□□□ 0.17
CCHCR1-216ENST00000502557 HACD2Q6Y1H2 254 aa16.13■□□□□ 0.17
CCHCR1-216ENST00000502557 ZNF836Q6ZNA1 936 aa16.13■□□□□ 0.17
CCHCR1-216ENST00000502557 FJX1Q86VR8 437 aa16.13■□□□□ 0.17
CCHCR1-216ENST00000502557 C11orf65Q8NCR3 313 aa16.13■□□□□ 0.17
CCHCR1-216ENST00000502557 HIPK4Q8NE63 616 aa16.13■□□□□ 0.17
CCHCR1-216ENST00000502557 POC1BQ8TC44 478 aa16.13■□□□□ 0.17
CCHCR1-216ENST00000502557 ZBTB8AQ96BR9 441 aa16.13■□□□□ 0.17
CCHCR1-216ENST00000502557 WDYHV1Q96HA8 205 aa16.13■□□□□ 0.17
CCHCR1-216ENST00000502557 ECSITQ9BQ95 431 aa16.13■□□□□ 0.17
CCHCR1-216ENST00000502557 PIGQQ9BRB3 760 aa16.13■□□□□ 0.17
CCHCR1-216ENST00000502557 PRDM14Q9GZV8 571 aa16.13■□□□□ 0.17
CCHCR1-216ENST00000502557 TP63Q9H3D4 680 aaPredicted RBP16.13■□□□□ 0.17
CCHCR1-216ENST00000502557 PIF1Q9H611 641 aa16.13■□□□□ 0.17
CCHCR1-216ENST00000502557 EXOSC3Q9NQT5 275 aaKnown RBP16.13■□□□□ 0.17
CCHCR1-216ENST00000502557 ARL8BQ9NVJ2 186 aa16.13■□□□□ 0.17
CCHCR1-216ENST00000502557 CMTM6Q9NX76 183 aa16.13■□□□□ 0.17
CCHCR1-216ENST00000502557 DNAJB12Q9NXW2 375 aaKnown RBP16.13■□□□□ 0.17
CCHCR1-216ENST00000502557 ANGPT4Q9Y264 503 aa16.13■□□□□ 0.17
CCHCR1-216ENST00000502557 NUP214P35658 2090 aaPredicted RBP16.12■□□□□ 0.17
CCHCR1-216ENST00000502557 C7orf72A4D263 438 aa16.12■□□□□ 0.17
CCHCR1-216ENST00000502557 CCL21O00585 134 aa16.12■□□□□ 0.17
CCHCR1-216ENST00000502557 THBS1P07996 1170 aa16.12■□□□□ 0.17
CCHCR1-216ENST00000502557 PABPC4LP0CB38 370 aaKnown RBP16.12■□□□□ 0.17
CCHCR1-216ENST00000502557 PSMA4P25789 261 aaKnown RBP16.12■□□□□ 0.17
CCHCR1-216ENST00000502557 PCGF2P35227 344 aa16.12■□□□□ 0.17
CCHCR1-216ENST00000502557 ART3Q13508 389 aa16.12■□□□□ 0.17
CCHCR1-216ENST00000502557 CBFBQ13951 182 aa16.12■□□□□ 0.17
CCHCR1-216ENST00000502557 LARS2Q15031 903 aaKnown RBP16.12■□□□□ 0.17
CCHCR1-216ENST00000502557 RNF220Q5VTB9 566 aa16.12■□□□□ 0.17
CCHCR1-216ENST00000502557 ZNF585AQ6P3V2 769 aa16.12■□□□□ 0.17
CCHCR1-216ENST00000502557 ENPP6Q6UWR7 440 aa16.12■□□□□ 0.17
CCHCR1-216ENST00000502557 ULK2Q8IYT8 1036 aa16.12■□□□□ 0.17
CCHCR1-216ENST00000502557 GTPBP8Q8N3Z3 284 aaPredicted RBP16.12■□□□□ 0.17
CCHCR1-216ENST00000502557 FITM2Q8N6M3 262 aa16.12■□□□□ 0.17
CCHCR1-216ENST00000502557 SPATA9Q9BWV2 254 aa16.12■□□□□ 0.17
CCHCR1-216ENST00000502557 RSPO3Q9BXY4 272 aaPredicted RBP16.12■□□□□ 0.17
CCHCR1-216ENST00000502557 CACYBPQ9HB71 228 aaKnown RBP16.12■□□□□ 0.17
CCHCR1-216ENST00000502557 RLIMQ9NVW2 624 aa16.12■□□□□ 0.17
CCHCR1-216ENST00000502557 MEMO1Q9Y316 297 aa16.12■□□□□ 0.17
CCHCR1-216ENST00000502557 IFT52Q9Y366 437 aa16.12■□□□□ 0.17
CCHCR1-216ENST00000502557 ZNF337Q9Y3M9 751 aa16.12■□□□□ 0.17
CCHCR1-216ENST00000502557 CHST2Q9Y4C5 530 aa16.12■□□□□ 0.17
CCHCR1-216ENST00000502557 GPC6Q9Y625 555 aaPredicted RBP16.12■□□□□ 0.17
CCHCR1-216ENST00000502557 CDHR4A6H8M9 788 aa16.11■□□□□ 0.17
CCHCR1-216ENST00000502557 FIGNL2A6NMB9 653 aa16.11■□□□□ 0.17
CCHCR1-216ENST00000502557 E9PLN8 166 aa16.11■□□□□ 0.17
CCHCR1-216ENST00000502557 LINC01387J3KSC0 135 aa16.11■□□□□ 0.17
CCHCR1-216ENST00000502557 NDUFAB1O14561 156 aa16.11■□□□□ 0.17
CCHCR1-216ENST00000502557 ADAM11O75078 769 aa16.11■□□□□ 0.17
CCHCR1-216ENST00000502557 GCM2O75603 506 aaPredicted RBP16.11■□□□□ 0.17
CCHCR1-216ENST00000502557 CPN1P15169 458 aa16.11■□□□□ 0.17
CCHCR1-216ENST00000502557 ZNF17P17021 662 aa16.11■□□□□ 0.17
CCHCR1-216ENST00000502557 AQP1P29972 269 aa16.11■□□□□ 0.17
CCHCR1-216ENST00000502557 CPA2P48052 419 aa16.11■□□□□ 0.17
CCHCR1-216ENST00000502557 CLDN18P56856 261 aa16.11■□□□□ 0.17
CCHCR1-216ENST00000502557 PCBP3P57721 371 aaKnown RBP16.11■□□□□ 0.17
CCHCR1-216ENST00000502557 FOXF1Q12946 379 aa16.11■□□□□ 0.17
CCHCR1-216ENST00000502557 QPRTQ15274 297 aa16.11■□□□□ 0.17
CCHCR1-216ENST00000502557 VMACQ2NL98 169 aa16.11■□□□□ 0.17
CCHCR1-216ENST00000502557 ZNF311Q5JNZ3 666 aa16.11■□□□□ 0.17
CCHCR1-216ENST00000502557 RTL6Q6ICC9 239 aa16.11■□□□□ 0.17
CCHCR1-216ENST00000502557 ARPINQ7Z6K5 226 aa16.11■□□□□ 0.17
CCHCR1-216ENST00000502557 KRT73Q86Y46 540 aa16.11■□□□□ 0.17
CCHCR1-216ENST00000502557 SLC15A3Q8IY34 581 aa16.11■□□□□ 0.17
CCHCR1-216ENST00000502557 PM20D2Q8IYS1 436 aa16.11■□□□□ 0.17
CCHCR1-216ENST00000502557 CLIP4Q8N3C7 705 aa16.11■□□□□ 0.17
CCHCR1-216ENST00000502557 RPRMLQ8N4K4 120 aa16.11■□□□□ 0.17
CCHCR1-216ENST00000502557 FAM26EQ8N5C1 309 aa16.11■□□□□ 0.17
CCHCR1-216ENST00000502557 BCAS4Q8TDM0 211 aa16.11■□□□□ 0.17
CCHCR1-216ENST00000502557 RNF145Q96MT1 663 aa16.11■□□□□ 0.17
CCHCR1-216ENST00000502557 ZNF583Q96ND8 569 aa16.11■□□□□ 0.17
CCHCR1-216ENST00000502557 DMRTA2Q96SC8 542 aa16.11■□□□□ 0.17
CCHCR1-216ENST00000502557 HOPXQ9BPY8 73 aaPredicted RBP16.11■□□□□ 0.17
CCHCR1-216ENST00000502557 VKORC1Q9BQB6 163 aa16.11■□□□□ 0.17
CCHCR1-216ENST00000502557 ALKBH4Q9NXW9 302 aa16.11■□□□□ 0.17
CCHCR1-216ENST00000502557 TAGLN3Q9UI15 199 aa16.11■□□□□ 0.17
CCHCR1-216ENST00000502557 ZNF232Q9UNY5 417 aa16.11■□□□□ 0.17
CCHCR1-216ENST00000502557 USP22Q9UPT9 525 aa16.11■□□□□ 0.17
CCHCR1-216ENST00000502557 CAMK2AQ9UQM7 478 aa16.11■□□□□ 0.17
CCHCR1-216ENST00000502557 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.1■□□□□ 0.17
CCHCR1-216ENST00000502557 CCT8L1PA6NM43 557 aa16.1■□□□□ 0.17
CCHCR1-216ENST00000502557 H3BML4 177 aa16.1■□□□□ 0.17
CCHCR1-216ENST00000502557 ETV2O00321 342 aaPredicted RBP16.1■□□□□ 0.17
CCHCR1-216ENST00000502557 WDR1O75083 606 aa16.1■□□□□ 0.17
CCHCR1-216ENST00000502557 AGFG2O95081 481 aa16.1■□□□□ 0.17
CCHCR1-216ENST00000502557 NTN1O95631 604 aa16.1■□□□□ 0.17
CCHCR1-216ENST00000502557 ZNF708P17019 499 aa16.1■□□□□ 0.17
CCHCR1-216ENST00000502557 PRKCAP17252 672 aa16.1■□□□□ 0.17
CCHCR1-216ENST00000502557 PGCP20142 388 aa16.1■□□□□ 0.17
CCHCR1-216ENST00000502557 POU3F2P20265 443 aaPredicted RBP16.1■□□□□ 0.17
CCHCR1-216ENST00000502557 ACVR2AP27037 513 aa16.1■□□□□ 0.17
CCHCR1-216ENST00000502557 RYKP34925 604 aa16.1■□□□□ 0.17
CCHCR1-216ENST00000502557 EIF1P41567 113 aaKnown RBP16.1■□□□□ 0.17
CCHCR1-216ENST00000502557 BCL2A1Q16548 175 aa16.1■□□□□ 0.17
CCHCR1-216ENST00000502557 ZSWIM7Q19AV6 140 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms