RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 UBQLNLQ8IYU4 475 aa15.16■□□□□ 0.02
PRKCB-210ENST00000498739 MARVELD2Q8N4S9 558 aa15.16■□□□□ 0.02
PRKCB-210ENST00000498739 OR52P1PQ8NH57 321 aa15.16■□□□□ 0.02
PRKCB-210ENST00000498739 GPR119Q8TDV5 335 aa15.16■□□□□ 0.02
PRKCB-210ENST00000498739 SMPDL3BQ92485 455 aa15.16■□□□□ 0.02
PRKCB-210ENST00000498739 LRRC58Q96CX6 371 aa15.16■□□□□ 0.02
PRKCB-210ENST00000498739 RCN3Q96D15 328 aa15.16■□□□□ 0.02
PRKCB-210ENST00000498739 ARSGQ96EG1 525 aa15.16■□□□□ 0.02
PRKCB-210ENST00000498739 MYLK2Q9H1R3 596 aa15.16■□□□□ 0.02
PRKCB-210ENST00000498739 NANOGQ9H9S0 305 aa15.16■□□□□ 0.02
PRKCB-210ENST00000498739 GID8Q9NWU2 228 aa15.16■□□□□ 0.02
PRKCB-210ENST00000498739 ARL2BPQ9Y2Y0 163 aa15.16■□□□□ 0.02
PRKCB-210ENST00000498739 ZNF337Q9Y3M9 751 aa15.16■□□□□ 0.02
PRKCB-210ENST00000498739 FAM215AQ9Y5M1 114 aa15.16■□□□□ 0.02
PRKCB-210ENST00000498739 WIPF3A6NGB9 483 aa15.15■□□□□ 0.02
PRKCB-210ENST00000498739 AHRRA9YTQ3 701 aa15.15■□□□□ 0.02
PRKCB-210ENST00000498739 LINC01387J3KSC0 135 aa15.15■□□□□ 0.02
PRKCB-210ENST00000498739 FXYD1O00168 92 aa15.15■□□□□ 0.02
PRKCB-210ENST00000498739 PGM3O95394 542 aa15.15■□□□□ 0.02
PRKCB-210ENST00000498739 NPPAP01160 153 aa15.15■□□□□ 0.02
PRKCB-210ENST00000498739 HOXD4P09016 255 aaPredicted RBP15.15■□□□□ 0.02
PRKCB-210ENST00000498739 LINGO3P0C6S8 592 aa15.15■□□□□ 0.02
PRKCB-210ENST00000498739 PEPDP12955 493 aa15.15■□□□□ 0.02
PRKCB-210ENST00000498739 NID1P14543 1247 aa15.15■□□□□ 0.02
PRKCB-210ENST00000498739 ZNF708P17019 499 aa15.15■□□□□ 0.02
PRKCB-210ENST00000498739 PTGER4P35408 488 aa15.15■□□□□ 0.02
PRKCB-210ENST00000498739 CLDN18P56856 261 aa15.15■□□□□ 0.02
PRKCB-210ENST00000498739 FOXF1Q12946 379 aa15.15■□□□□ 0.02
PRKCB-210ENST00000498739 SCARB2Q14108 478 aa15.15■□□□□ 0.02
PRKCB-210ENST00000498739 TMEM44Q2T9K0 475 aa15.15■□□□□ 0.02
PRKCB-210ENST00000498739 ACSF3Q4G176 576 aaPredicted RBP15.15■□□□□ 0.02
PRKCB-210ENST00000498739 LIN52Q52LA3 116 aa15.15■□□□□ 0.02
PRKCB-210ENST00000498739 MRPL2Q5T653 305 aaKnown RBP15.15■□□□□ 0.02
PRKCB-210ENST00000498739 PRAMEF8Q5VWM4 474 aa15.15■□□□□ 0.02
PRKCB-210ENST00000498739 PRAMEF7Q5VXH5 474 aa15.15■□□□□ 0.02
PRKCB-210ENST00000498739 RPTNQ6XPR3 784 aa15.15■□□□□ 0.02
PRKCB-210ENST00000498739 ZNF836Q6ZNA1 936 aa15.15■□□□□ 0.02
PRKCB-210ENST00000498739 CMIPQ8IY22 773 aa15.15■□□□□ 0.02
PRKCB-210ENST00000498739 GTPBP8Q8N3Z3 284 aaPredicted RBP15.15■□□□□ 0.02
PRKCB-210ENST00000498739 METTL25Q8N6Q8 603 aa15.15■□□□□ 0.02
PRKCB-210ENST00000498739 FAM71CQ8NEG0 241 aa15.15■□□□□ 0.02
PRKCB-210ENST00000498739 POC1BQ8TC44 478 aa15.15■□□□□ 0.02
PRKCB-210ENST00000498739 CNOT9Q92600 299 aaKnown RBP15.15■□□□□ 0.02
PRKCB-210ENST00000498739 RNF145Q96MT1 663 aa15.15■□□□□ 0.02
PRKCB-210ENST00000498739 TRIB1Q96RU8 372 aa15.15■□□□□ 0.02
PRKCB-210ENST00000498739 CCT8L2Q96SF2 557 aa15.15■□□□□ 0.02
PRKCB-210ENST00000498739 TTYH2Q9BSA4 534 aa15.15■□□□□ 0.02
PRKCB-210ENST00000498739 TMEM38AQ9H6F2 299 aa15.15■□□□□ 0.02
PRKCB-210ENST00000498739 BCL2L10Q9HD36 194 aa15.15■□□□□ 0.02
PRKCB-210ENST00000498739 ZNF443Q9Y2A4 671 aaPredicted RBP15.15■□□□□ 0.02
PRKCB-210ENST00000498739 HELZ2Q9BYK8 2649 aaKnown RBP15.14■□□□□ 0.01
PRKCB-210ENST00000498739 C7orf72A4D263 438 aa15.14■□□□□ 0.01
PRKCB-210ENST00000498739 AIM2O14862 343 aa15.14■□□□□ 0.01
PRKCB-210ENST00000498739 SEC14L5O43304 696 aa15.14■□□□□ 0.01
PRKCB-210ENST00000498739 PGCP20142 388 aa15.14■□□□□ 0.01
PRKCB-210ENST00000498739 SLC6A2P23975 617 aa15.14■□□□□ 0.01
PRKCB-210ENST00000498739 RYKP34925 604 aa15.14■□□□□ 0.01
PRKCB-210ENST00000498739 SMSP52788 366 aa15.14■□□□□ 0.01
PRKCB-210ENST00000498739 NUP107P57740 925 aa15.14■□□□□ 0.01
PRKCB-210ENST00000498739 PLAURQ03405 335 aa15.14■□□□□ 0.01
PRKCB-210ENST00000498739 PMPCAQ10713 525 aa15.14■□□□□ 0.01
PRKCB-210ENST00000498739 LARS2Q15031 903 aaKnown RBP15.14■□□□□ 0.01
PRKCB-210ENST00000498739 QPRTQ15274 297 aa15.14■□□□□ 0.01
PRKCB-210ENST00000498739 SF3B4Q15427 424 aaKnown RBP eCLIP15.14■□□□□ 0.01
PRKCB-210ENST00000498739 BCL2A1Q16548 175 aa15.14■□□□□ 0.01
PRKCB-210ENST00000498739 RABL3Q5HYI8 236 aa15.14■□□□□ 0.01
PRKCB-210ENST00000498739 REEP3Q6NUK4 255 aa15.14■□□□□ 0.01
PRKCB-210ENST00000498739 MRGPRGQ86SM5 289 aa15.14■□□□□ 0.01
PRKCB-210ENST00000498739 MEIOBQ8N635 442 aa15.14■□□□□ 0.01
PRKCB-210ENST00000498739 OR8J3Q8NGG0 315 aa15.14■□□□□ 0.01
PRKCB-210ENST00000498739 OR10A6Q8NH74 314 aa15.14■□□□□ 0.01
PRKCB-210ENST00000498739 FBXO27Q8NI29 283 aa15.14■□□□□ 0.01
PRKCB-210ENST00000498739 SH3GL1Q99961 368 aa15.14■□□□□ 0.01
PRKCB-210ENST00000498739 KAT8Q9H7Z6 458 aaKnown RBP15.14■□□□□ 0.01
PRKCB-210ENST00000498739 EXOSC3Q9NQT5 275 aaKnown RBP15.14■□□□□ 0.01
PRKCB-210ENST00000498739 DNAJB12Q9NXW2 375 aaKnown RBP15.14■□□□□ 0.01
PRKCB-210ENST00000498739 ADAM21Q9UKJ8 722 aa15.14■□□□□ 0.01
PRKCB-210ENST00000498739 ZNF232Q9UNY5 417 aa15.14■□□□□ 0.01
PRKCB-210ENST00000498739 ANGPT4Q9Y264 503 aa15.14■□□□□ 0.01
PRKCB-210ENST00000498739 IFT52Q9Y366 437 aa15.14■□□□□ 0.01
PRKCB-210ENST00000498739 GPC6Q9Y625 555 aaPredicted RBP15.14■□□□□ 0.01
PRKCB-210ENST00000498739 ZNF407Q9C0G0 2248 aa15.13■□□□□ 0.01
PRKCB-210ENST00000498739 FASNP49327 2511 aaKnown RBP15.13■□□□□ 0.01
PRKCB-210ENST00000498739 KDM4EB2RXH2 506 aaPredicted RBP15.13■□□□□ 0.01
PRKCB-210ENST00000498739 THBS1P07996 1170 aa15.13■□□□□ 0.01
PRKCB-210ENST00000498739 PABPC4LP0CB38 370 aaKnown RBP15.13■□□□□ 0.01
PRKCB-210ENST00000498739 GLI4P10075 376 aa15.13■□□□□ 0.01
PRKCB-210ENST00000498739 PRKCAP17252 672 aa15.13■□□□□ 0.01
PRKCB-210ENST00000498739 PSMA4P25789 261 aaKnown RBP15.13■□□□□ 0.01
PRKCB-210ENST00000498739 EIF1P41567 113 aaKnown RBP15.13■□□□□ 0.01
PRKCB-210ENST00000498739 RBBP4Q09028 425 aa15.13■□□□□ 0.01
PRKCB-210ENST00000498739 ADRM1Q16186 407 aa15.13■□□□□ 0.01
PRKCB-210ENST00000498739 ZNF311Q5JNZ3 666 aa15.13■□□□□ 0.01
PRKCB-210ENST00000498739 PTOV1Q86YD1 416 aa15.13■□□□□ 0.01
PRKCB-210ENST00000498739 C11orf65Q8NCR3 313 aa15.13■□□□□ 0.01
PRKCB-210ENST00000498739 HIPK4Q8NE63 616 aa15.13■□□□□ 0.01
PRKCB-210ENST00000498739 OR10Q1Q8NGQ4 319 aa15.13■□□□□ 0.01
PRKCB-210ENST00000498739 ZNF563Q8TA94 476 aa15.13■□□□□ 0.01
PRKCB-210ENST00000498739 ZPLD1Q8TCW7 415 aa15.13■□□□□ 0.01
PRKCB-210ENST00000498739 ITLN2Q8WWU7 325 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms