RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 RSL1D1O76021 490 aaKnown RBP12.99□□□□□ -0.33
TRAF4-212ENST00000498540 ZNF16P17020 682 aaPredicted RBP12.99□□□□□ -0.33
TRAF4-212ENST00000498540 GCAP28676 217 aa12.99□□□□□ -0.33
TRAF4-212ENST00000498540 CASQ1P31415 396 aa12.99□□□□□ -0.33
TRAF4-212ENST00000498540 SPOCK1Q08629 439 aa12.99□□□□□ -0.33
TRAF4-212ENST00000498540 TOMM34Q15785 309 aaPredicted RBP12.99□□□□□ -0.33
TRAF4-212ENST00000498540 ELOA3BQ3SY89 546 aa12.99□□□□□ -0.33
TRAF4-212ENST00000498540 AGAP6Q5VW22 663 aa12.99□□□□□ -0.33
TRAF4-212ENST00000498540 TRIM46Q7Z4K8 759 aa12.99□□□□□ -0.33
TRAF4-212ENST00000498540 ZNF525Q8N782 197 aa12.99□□□□□ -0.33
TRAF4-212ENST00000498540 CCNYL1Q8N7R7 359 aa12.99□□□□□ -0.33
TRAF4-212ENST00000498540 COX18Q8N8Q8 333 aa12.99□□□□□ -0.33
TRAF4-212ENST00000498540 ELOA3Q8NG57 546 aa12.99□□□□□ -0.33
TRAF4-212ENST00000498540 OR2W6PQ8NHA6 318 aa12.99□□□□□ -0.33
TRAF4-212ENST00000498540 PHOSPHO1Q8TCT1 267 aa12.99□□□□□ -0.33
TRAF4-212ENST00000498540 ZFP90Q8TF47 636 aa12.99□□□□□ -0.33
TRAF4-212ENST00000498540 ZNF524Q96C55 264 aa12.99□□□□□ -0.33
TRAF4-212ENST00000498540 ADAD1Q96M93 576 aaKnown RBP12.99□□□□□ -0.33
TRAF4-212ENST00000498540 ZNF300Q96RE9 604 aaPredicted RBP12.99□□□□□ -0.33
TRAF4-212ENST00000498540 C19orf24Q9BVV8 132 aa12.99□□□□□ -0.33
TRAF4-212ENST00000498540 MANSC1Q9H8J5 431 aa12.99□□□□□ -0.33
TRAF4-212ENST00000498540 GRPEL1Q9HAV7 217 aa12.99□□□□□ -0.33
TRAF4-212ENST00000498540 BCO1Q9HAY6 547 aa12.99□□□□□ -0.33
TRAF4-212ENST00000498540 TNFRSF12AQ9NP84 129 aa12.99□□□□□ -0.33
TRAF4-212ENST00000498540 CCL27Q9Y4X3 112 aa12.99□□□□□ -0.33
TRAF4-212ENST00000498540 NPIPA5A0A0B4J1W7 369 aa12.98□□□□□ -0.33
TRAF4-212ENST00000498540 GOLGA8QA0A0J9YX86 632 aa12.98□□□□□ -0.33
TRAF4-212ENST00000498540 A0A1W2PNR3 127 aa12.98□□□□□ -0.33
TRAF4-212ENST00000498540 GOLGA8OA6NCC3 632 aa12.98□□□□□ -0.33
TRAF4-212ENST00000498540 GJE1A6NN92 205 aa12.98□□□□□ -0.33
TRAF4-212ENST00000498540 C9JVG2 144 aa12.98□□□□□ -0.33
TRAF4-212ENST00000498540 E7EQL1 145 aa12.98□□□□□ -0.33
TRAF4-212ENST00000498540 NPIPA7E9PJI5 369 aa12.98□□□□□ -0.33
TRAF4-212ENST00000498540 NPIPB8E9PQR5 432 aa12.98□□□□□ -0.33
TRAF4-212ENST00000498540 GOLGA8NF8WBI6 632 aa12.98□□□□□ -0.33
TRAF4-212ENST00000498540 GOLGA8RI6L899 631 aa12.98□□□□□ -0.33
TRAF4-212ENST00000498540 RGS14O43566 566 aa12.98□□□□□ -0.33
TRAF4-212ENST00000498540 NUDT14O95848 222 aa12.98□□□□□ -0.33
TRAF4-212ENST00000498540 ALOX5P09917 674 aa12.98□□□□□ -0.33
TRAF4-212ENST00000498540 NPIPA8P0DM63 369 aa12.98□□□□□ -0.33
TRAF4-212ENST00000498540 COX5AP20674 150 aa12.98□□□□□ -0.33
TRAF4-212ENST00000498540 EFNA1P20827 205 aaPredicted RBP12.98□□□□□ -0.33
TRAF4-212ENST00000498540 IGHV1-2P23083 117 aa12.98□□□□□ -0.33
TRAF4-212ENST00000498540 LCN1P31025 176 aa12.98□□□□□ -0.33
TRAF4-212ENST00000498540 TTKP33981 857 aa12.98□□□□□ -0.33
TRAF4-212ENST00000498540 KIAA0040Q15053 153 aa12.98□□□□□ -0.33
TRAF4-212ENST00000498540 NDUFAF6Q330K2 333 aa12.98□□□□□ -0.33
TRAF4-212ENST00000498540 EXOSC6Q5RKV6 272 aaKnown RBP12.98□□□□□ -0.33
TRAF4-212ENST00000498540 TIMM23BQ5SRD1 257 aa12.98□□□□□ -0.33
TRAF4-212ENST00000498540 TIFABQ6ZNK6 161 aa12.98□□□□□ -0.33
TRAF4-212ENST00000498540 Q6ZSR9 355 aa12.98□□□□□ -0.33
TRAF4-212ENST00000498540 PIAS4Q8N2W9 510 aaPredicted RBP12.98□□□□□ -0.33
TRAF4-212ENST00000498540 SLC43A2Q8N370 569 aa12.98□□□□□ -0.33
TRAF4-212ENST00000498540 ARIH2OSQ8N7S6 290 aa12.98□□□□□ -0.33
TRAF4-212ENST00000498540 ZFP28Q8NHY6 868 aa12.98□□□□□ -0.33
TRAF4-212ENST00000498540 JADE3Q92613 823 aa12.98□□□□□ -0.33
TRAF4-212ENST00000498540 ZNF775Q96BV0 537 aaPredicted RBP12.98□□□□□ -0.33
TRAF4-212ENST00000498540 MUCL1Q96DR8 90 aa12.98□□□□□ -0.33
TRAF4-212ENST00000498540 AMBRA1Q9C0C7 1298 aa12.98□□□□□ -0.33
TRAF4-212ENST00000498540 CBLN4Q9NTU7 201 aa12.98□□□□□ -0.33
TRAF4-212ENST00000498540 GIN1Q9NXP7 522 aa12.98□□□□□ -0.33
TRAF4-212ENST00000498540 KLHL9Q9P2J3 617 aa12.98□□□□□ -0.33
TRAF4-212ENST00000498540 ICAM5Q9UMF0 924 aa12.98□□□□□ -0.33
TRAF4-212ENST00000498540 CARD8Q9Y2G2 431 aa12.98□□□□□ -0.33
TRAF4-212ENST00000498540 PTGDR2Q9Y5Y4 395 aa12.98□□□□□ -0.33
TRAF4-212ENST00000498540 SVEP1Q4LDE5 3571 aa12.97□□□□□ -0.33
TRAF4-212ENST00000498540 A0A087WUV0 522 aaPredicted RBP12.97□□□□□ -0.33
TRAF4-212ENST00000498540 EXOC1LA0A1B0GW35 172 aa12.97□□□□□ -0.33
TRAF4-212ENST00000498540 KIF2AO00139 706 aaPredicted RBP12.97□□□□□ -0.33
TRAF4-212ENST00000498540 HAX1O00165 279 aa12.97□□□□□ -0.33
TRAF4-212ENST00000498540 SMAD9O15198 467 aaKnown RBP12.97□□□□□ -0.33
TRAF4-212ENST00000498540 AKAP10O43572 662 aa12.97□□□□□ -0.33
TRAF4-212ENST00000498540 SEC22BO75396 215 aa12.97□□□□□ -0.33
TRAF4-212ENST00000498540 IGHV4-31P0DP07 118 aa12.97□□□□□ -0.33
TRAF4-212ENST00000498540 SLC25A16P16260 332 aa12.97□□□□□ -0.33
TRAF4-212ENST00000498540 PRKCAP17252 672 aa12.97□□□□□ -0.33
TRAF4-212ENST00000498540 GGT1P19440 569 aa12.97□□□□□ -0.33
TRAF4-212ENST00000498540 ECHS1P30084 290 aa12.97□□□□□ -0.33
TRAF4-212ENST00000498540 FRKP42685 505 aaPredicted RBP12.97□□□□□ -0.33
TRAF4-212ENST00000498540 SERPINB4P48594 390 aa12.97□□□□□ -0.33
TRAF4-212ENST00000498540 DSCR9P59020 149 aa12.97□□□□□ -0.33
TRAF4-212ENST00000498540 POU6F2P78424 691 aaPredicted RBP12.97□□□□□ -0.33
TRAF4-212ENST00000498540 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.97□□□□□ -0.331e-8■■■□□ 18
TRAF4-212ENST00000498540 SYT10Q6XYQ8 523 aa12.97□□□□□ -0.33
TRAF4-212ENST00000498540 B3GLCTQ6Y288 498 aa12.97□□□□□ -0.33
TRAF4-212ENST00000498540 LCA5Q86VQ0 697 aa12.97□□□□□ -0.33
TRAF4-212ENST00000498540 ZNF75CPQ92670 426 aaPredicted RBP12.97□□□□□ -0.33
TRAF4-212ENST00000498540 CDS1Q92903 461 aa12.97□□□□□ -0.33
TRAF4-212ENST00000498540 PPCDCQ96CD2 204 aa12.97□□□□□ -0.33
TRAF4-212ENST00000498540 ZNF764Q96H86 408 aaPredicted RBP12.97□□□□□ -0.33
TRAF4-212ENST00000498540 FMO2Q99518 471 aa12.97□□□□□ -0.33
TRAF4-212ENST00000498540 BTBD2Q9BX70 525 aa12.97□□□□□ -0.33
TRAF4-212ENST00000498540 SHARPINQ9H0F6 387 aa12.97□□□□□ -0.33
TRAF4-212ENST00000498540 L2HGDHQ9H9P8 463 aa12.97□□□□□ -0.33
TRAF4-212ENST00000498540 RRAGDQ9NQL2 400 aaPredicted RBP12.97□□□□□ -0.33
TRAF4-212ENST00000498540 LPAR3Q9UBY5 353 aa12.97□□□□□ -0.33
TRAF4-212ENST00000498540 ACTL7BQ9Y614 415 aa12.97□□□□□ -0.33
TRAF4-212ENST00000498540 GPC6Q9Y625 555 aaPredicted RBP12.97□□□□□ -0.33
TRAF4-212ENST00000498540 OR5H1A6NKK0 313 aa12.96□□□□□ -0.33
TRAF4-212ENST00000498540 CRCPO75575 148 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms