RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 FBXO27Q8NI29 283 aa11.54□□□□□ -0.56
HSPG2-213ENST00000498495 POC1BQ8TC44 478 aa11.54□□□□□ -0.56
HSPG2-213ENST00000498495 LRRC46Q96FV0 321 aa11.54□□□□□ -0.56
HSPG2-213ENST00000498495 AURKBQ96GD4 344 aaPredicted RBP11.54□□□□□ -0.56
HSPG2-213ENST00000498495 RNF145Q96MT1 663 aa11.54□□□□□ -0.56
HSPG2-213ENST00000498495 ZFP3Q96NJ6 502 aa11.54□□□□□ -0.56
HSPG2-213ENST00000498495 NPAS1Q99742 590 aa11.54□□□□□ -0.56
HSPG2-213ENST00000498495 SPOCK3Q9BQ16 436 aa11.54□□□□□ -0.56
HSPG2-213ENST00000498495 KLHDC3Q9BQ90 382 aa11.54□□□□□ -0.56
HSPG2-213ENST00000498495 THUMPD3Q9BV44 507 aaKnown RBP11.54□□□□□ -0.56
HSPG2-213ENST00000498495 PINK1Q9BXM7 581 aa11.54□□□□□ -0.56
HSPG2-213ENST00000498495 PAIP1Q9H074 479 aaKnown RBP11.54□□□□□ -0.56
HSPG2-213ENST00000498495 ENKD1Q9H0I2 346 aa11.54□□□□□ -0.56
HSPG2-213ENST00000498495 RAD21L1Q9H4I0 556 aa11.54□□□□□ -0.56
HSPG2-213ENST00000498495 THUMPD1Q9NXG2 353 aaKnown RBP11.54□□□□□ -0.56
HSPG2-213ENST00000498495 CLCF1Q9UBD9 225 aa11.54□□□□□ -0.56
HSPG2-213ENST00000498495 SLC35A3Q9Y2D2 325 aa11.54□□□□□ -0.56
HSPG2-213ENST00000498495 GPC6Q9Y625 555 aaPredicted RBP11.54□□□□□ -0.56
HSPG2-213ENST00000498495 DOPEY1Q5JWR5 2465 aa11.54□□□□□ -0.56
HSPG2-213ENST00000498495 USP9YO00507 2555 aaPredicted RBP11.54□□□□□ -0.56
HSPG2-213ENST00000498495 ARHGAP21Q5T5U3 1957 aa11.54□□□□□ -0.56
HSPG2-213ENST00000498495 CENPVL1A0A0U1RR11 272 aa11.53□□□□□ -0.56
HSPG2-213ENST00000498495 A0A1W2PP18 115 aa11.53□□□□□ -0.56
HSPG2-213ENST00000498495 SLC22A20A6NK97 555 aa11.53□□□□□ -0.56
HSPG2-213ENST00000498495 EIF1AYO14602 144 aaKnown RBP11.53□□□□□ -0.56
HSPG2-213ENST00000498495 TGM6O95932 706 aa11.53□□□□□ -0.56
HSPG2-213ENST00000498495 IL18BPO95998 194 aa11.53□□□□□ -0.56
HSPG2-213ENST00000498495 OPN1LWP04000 364 aa11.53□□□□□ -0.56
HSPG2-213ENST00000498495 UBTFL6P0CB48 400 aaPredicted RBP11.53□□□□□ -0.56
HSPG2-213ENST00000498495 ETFAP13804 333 aa11.53□□□□□ -0.56
HSPG2-213ENST00000498495 IL7RP16871 459 aa11.53□□□□□ -0.56
HSPG2-213ENST00000498495 ME2P23368 584 aa11.53□□□□□ -0.56
HSPG2-213ENST00000498495 PSMA4P25789 261 aaKnown RBP11.53□□□□□ -0.56
HSPG2-213ENST00000498495 PGM1P36871 562 aa11.53□□□□□ -0.56
HSPG2-213ENST00000498495 EIF1AXP47813 144 aaKnown RBP11.53□□□□□ -0.56
HSPG2-213ENST00000498495 ARFIP2P53365 341 aa11.53□□□□□ -0.56
HSPG2-213ENST00000498495 MVDP53602 400 aa11.53□□□□□ -0.56
HSPG2-213ENST00000498495 DSTNP60981 165 aa11.53□□□□□ -0.56
HSPG2-213ENST00000498495 EEF1A1P68104 462 aaKnown RBP11.53□□□□□ -0.56
HSPG2-213ENST00000498495 TFF3Q07654 80 aa11.53□□□□□ -0.56
HSPG2-213ENST00000498495 GNA13Q14344 377 aa11.53□□□□□ -0.56
HSPG2-213ENST00000498495 TOMM34Q15785 309 aaPredicted RBP11.53□□□□□ -0.56
HSPG2-213ENST00000498495 PAGE3Q5JUK9 113 aa11.53□□□□□ -0.56
HSPG2-213ENST00000498495 PDSS1Q5T2R2 415 aa11.53□□□□□ -0.56
HSPG2-213ENST00000498495 EEF1A1P5Q5VTE0 462 aa11.53□□□□□ -0.56
HSPG2-213ENST00000498495 OR2A2Q6IF42 318 aa11.53□□□□□ -0.56
HSPG2-213ENST00000498495 MEX3BQ6ZN04 569 aaKnown RBP11.53□□□□□ -0.56
HSPG2-213ENST00000498495 HMGN2P46Q86SG4 172 aa11.53□□□□□ -0.56
HSPG2-213ENST00000498495 LILRA2Q8N149 483 aa11.53□□□□□ -0.56
HSPG2-213ENST00000498495 PMM1Q92871 262 aa11.53□□□□□ -0.56
HSPG2-213ENST00000498495 INTS12Q96CB8 462 aaKnown RBP11.53□□□□□ -0.56
HSPG2-213ENST00000498495 ARSGQ96EG1 525 aa11.53□□□□□ -0.56
HSPG2-213ENST00000498495 ZNF845Q96IR2 970 aaPredicted RBP11.53□□□□□ -0.56
HSPG2-213ENST00000498495 TMEM120AQ9BXJ8 343 aa11.53□□□□□ -0.56
HSPG2-213ENST00000498495 PRRG4Q9BZD6 226 aa11.53□□□□□ -0.56
HSPG2-213ENST00000498495 QRSL1Q9H0R6 528 aaKnown RBP11.53□□□□□ -0.56
HSPG2-213ENST00000498495 SLC38A1Q9H2H9 487 aa11.53□□□□□ -0.56
HSPG2-213ENST00000498495 SLC52A3Q9NQ40 469 aa11.53□□□□□ -0.56
HSPG2-213ENST00000498495 FGFR1OP2Q9NVK5 253 aa11.53□□□□□ -0.56
HSPG2-213ENST00000498495 CALML5Q9NZT1 146 aa11.53□□□□□ -0.56
HSPG2-213ENST00000498495 SLAMF8Q9P0V8 285 aa11.53□□□□□ -0.56
HSPG2-213ENST00000498495 P2RX2Q9UBL9 471 aa11.53□□□□□ -0.56
HSPG2-213ENST00000498495 NDUFAF1Q9Y375 327 aa11.53□□□□□ -0.56
HSPG2-213ENST00000498495 L3MBTL1Q9Y468 752 aa11.53□□□□□ -0.56
HSPG2-213ENST00000498495 FLNBO75369 2602 aaKnown RBP11.53□□□□□ -0.56
HSPG2-213ENST00000498495 HECTD1Q9ULT8 2610 aa11.53□□□□□ -0.56
HSPG2-213ENST00000498495 MED12Q93074 2177 aa11.52□□□□□ -0.56
HSPG2-213ENST00000498495 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.52□□□□□ -0.57
HSPG2-213ENST00000498495 AGAP5A6NIR3 686 aa11.52□□□□□ -0.57
HSPG2-213ENST00000498495 SYT5O00445 386 aa11.52□□□□□ -0.57
HSPG2-213ENST00000498495 DBIP07108 87 aaKnown RBP11.52□□□□□ -0.57
HSPG2-213ENST00000498495 CHRM4P08173 479 aa11.52□□□□□ -0.57
HSPG2-213ENST00000498495 TFPTP0C1Z6 253 aa11.52□□□□□ -0.57
HSPG2-213ENST00000498495 PRKCAP17252 672 aa11.52□□□□□ -0.57
HSPG2-213ENST00000498495 PGCP20142 388 aa11.52□□□□□ -0.57
HSPG2-213ENST00000498495 CAPN3P20807 821 aa11.52□□□□□ -0.57
HSPG2-213ENST00000498495 MDH1P40925 334 aaKnown RBP11.52□□□□□ -0.57
HSPG2-213ENST00000498495 CRISP3P54108 245 aa11.52□□□□□ -0.57
HSPG2-213ENST00000498495 SF3A3Q12874 501 aaKnown RBP eCLIP11.52□□□□□ -0.57
HSPG2-213ENST00000498495 FOXF1Q12946 379 aa11.52□□□□□ -0.57
HSPG2-213ENST00000498495 FOXF2Q12947 444 aa11.52□□□□□ -0.57
HSPG2-213ENST00000498495 FADDQ13158 208 aa11.52□□□□□ -0.57
HSPG2-213ENST00000498495 SKP2Q13309 424 aa11.52□□□□□ -0.57
HSPG2-213ENST00000498495 PON3Q15166 354 aa11.52□□□□□ -0.57
HSPG2-213ENST00000498495 QPRTQ15274 297 aa11.52□□□□□ -0.57
HSPG2-213ENST00000498495 RGNQ15493 299 aa11.52□□□□□ -0.57
HSPG2-213ENST00000498495 LRIF1Q5T3J3 769 aa11.52□□□□□ -0.57
HSPG2-213ENST00000498495 PPP4R4Q6NUP7 873 aa11.52□□□□□ -0.57
HSPG2-213ENST00000498495 POMZP3Q6PJE2 187 aa11.52□□□□□ -0.57
HSPG2-213ENST00000498495 ESPNLQ6ZVH7 1005 aa11.52□□□□□ -0.57
HSPG2-213ENST00000498495 GGNQ86UU5 652 aa11.52□□□□□ -0.57
HSPG2-213ENST00000498495 MCEMP1Q8IX19 187 aa11.52□□□□□ -0.57
HSPG2-213ENST00000498495 PEX5LQ8IYB4 626 aa11.52□□□□□ -0.57
HSPG2-213ENST00000498495 METTL25Q8N6Q8 603 aa11.52□□□□□ -0.57
HSPG2-213ENST00000498495 ATP6V1C2Q8NEY4 427 aa11.52□□□□□ -0.57
HSPG2-213ENST00000498495 ZNF563Q8TA94 476 aa11.52□□□□□ -0.57
HSPG2-213ENST00000498495 SLC38A5Q8WUX1 472 aa11.52□□□□□ -0.57
HSPG2-213ENST00000498495 TMEM234Q8WY98 164 aa11.52□□□□□ -0.57
HSPG2-213ENST00000498495 FIG4Q92562 907 aa11.52□□□□□ -0.57
HSPG2-213ENST00000498495 MRGPRX4Q96LA9 322 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms