RNA–Protein interactions for RNA: ENST00000497345.1

CMSS1-209, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-209ENST00000497345 DUXAA6NLW8 204 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 CPSF4LA6NMK7 179 aaKnown RBP4.38□□□□□ -1.71
CMSS1-209ENST00000497345 C17orf51A8MQB3 221 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 HNRNPCL2B2RXH8 293 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 HNRNPCL3B7ZW38 293 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 G3V2T6 193 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 TNFRSF11BO00300 401 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 EI24O14681 340 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 PLD2O14939 933 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 BRINP1O60477 761 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 BCAS1O75363 584 aaPredicted RBP4.38□□□□□ -1.71
CMSS1-209ENST00000497345 KCNK2O95069 426 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 AMY2AP04746 511 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 IFNW1P05000 195 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 UBTFL6P0CB48 400 aaPredicted RBP4.38□□□□□ -1.71
CMSS1-209ENST00000497345 HNRNPCL4P0DMR1 293 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 CYP4B1P13584 511 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 PRG2P13727 222 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 POU2F1P14859 743 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 IL7RP16871 459 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 AMY2BP19961 511 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 TCN2P20062 427 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 TCEA1P23193 301 aaKnown RBP4.38□□□□□ -1.71
CMSS1-209ENST00000497345 RRM2P31350 389 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 CCKBRP32239 447 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 RYKP34925 604 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 DLSTP36957 453 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 NBL1P41271 181 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 KCNJ5P48544 419 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 GSSP48637 474 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 NOVA1P51513 510 aaKnown RBP4.38□□□□□ -1.71
CMSS1-209ENST00000497345 CCR4P51679 360 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 RRADP55042 308 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 TAS2R41P59536 307 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 GABREP78334 506 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 IGLV3-21P80748 117 aaPredicted RBP4.38□□□□□ -1.71
CMSS1-209ENST00000497345 PSG6Q00889 435 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 PIN1Q13526 163 aaPredicted RBP4.38□□□□□ -1.71
CMSS1-209ENST00000497345 GNA13Q14344 377 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 GK3PQ14409 553 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 ELAVL1Q15717 326 aaKnown RBP4.38□□□□□ -1.71
CMSS1-209ENST00000497345 MAPK14Q16539 360 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 CLPPQ16740 277 aaPredicted RBP4.38□□□□□ -1.71
CMSS1-209ENST00000497345 EXOC3L2Q2M3D2 409 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 ARHGAP11BQ3KRB8 267 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 CRB2Q5IJ48 1285 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 PDZK1Q5T2W1 519 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 FCRLBQ6BAA4 426 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 OR2T5Q6IEZ7 315 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 KRTAP5-3Q6L8H2 238 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 PAPD4Q6PIY7 484 aaKnown RBP4.38□□□□□ -1.71
CMSS1-209ENST00000497345 FAM198BQ6UWH4 519 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 FRRS1Q6ZNA5 592 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 QSOX2Q6ZRP7 698 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 Q6ZSN1 163 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 CCDC80Q76M96 950 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 SLC29A4Q7RTT9 530 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 TIPARPQ7Z3E1 657 aaKnown RBP4.38□□□□□ -1.71
CMSS1-209ENST00000497345 CPEB2Q7Z5Q1 589 aaKnown RBP4.38□□□□□ -1.71
CMSS1-209ENST00000497345 PIP4P1Q86T03 277 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 EPHX4Q8IUS5 362 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 SLC30A8Q8IWU4 369 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 PEX5LQ8IYB4 626 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 TAGAPQ8N103 731 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 ZNF619Q8N2I2 560 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 CADM2Q8N3J6 435 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 TMCO5AQ8N6Q1 288 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 ZNF615Q8N8J6 731 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 ATG16L2Q8NAA4 619 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 PAPD5Q8NDF8 572 aaKnown RBP4.38□□□□□ -1.71
CMSS1-209ENST00000497345 PLPP5Q8NEB5 264 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 OR7G1Q8NGA0 311 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 OR2T29Q8NH02 315 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 MIPOL1Q8TD10 442 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 GRHL3Q8TE85 626 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 ZNF721Q8TF20 911 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 CNOT9Q92600 299 aaKnown RBP4.38□□□□□ -1.71
CMSS1-209ENST00000497345 CNBD2Q96M20 576 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 VSTM2LQ96N03 204 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 TRNT1Q96Q11 434 aaKnown RBP4.38□□□□□ -1.71
CMSS1-209ENST00000497345 ZNF300Q96RE9 604 aaPredicted RBP4.38□□□□□ -1.71
CMSS1-209ENST00000497345 SDF2Q99470 211 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 PIP5K1AQ99755 562 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 PRRX2Q99811 253 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 PELOQ9BRX2 385 aaKnown RBP4.38□□□□□ -1.71
CMSS1-209ENST00000497345 LMF2Q9BU23 707 aaKnown RBP4.38□□□□□ -1.71
CMSS1-209ENST00000497345 C9orf16Q9BUW7 83 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 SPATA5L1Q9BVQ7 753 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 NXF5Q9H1B4 397 aaKnown RBP4.38□□□□□ -1.71
CMSS1-209ENST00000497345 SLC38A1Q9H2H9 487 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 VCXQ9H320 206 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 RIBC2Q9H4K1 309 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 MAGIXQ9H6Y5 334 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 TRIM45Q9H8W5 580 aaPredicted RBP4.38□□□□□ -1.71
CMSS1-209ENST00000497345 REEP1Q9H902 201 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 CLK4Q9HAZ1 481 aaKnown RBP4.38□□□□□ -1.71
CMSS1-209ENST00000497345 NTN4Q9HB63 628 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 ZBTB20Q9HC78 741 aaPredicted RBP4.38□□□□□ -1.71
CMSS1-209ENST00000497345 Q9N2J8 555 aa4.38□□□□□ -1.71
CMSS1-209ENST00000497345 OLAHQ9NV23 265 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms