RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 TSC22D2O75157 780 aa3.03□□□□□ -1.92
SMC4-225ENST00000497203 MTX2O75431 263 aa3.03□□□□□ -1.92
SMC4-225ENST00000497203 SCRG1O75711 98 aa3.03□□□□□ -1.92
SMC4-225ENST00000497203 STSP08842 583 aa3.03□□□□□ -1.92
SMC4-225ENST00000497203 UQCRC2P22695 453 aa3.03□□□□□ -1.92
SMC4-225ENST00000497203 HPCAL1P37235 193 aa3.03□□□□□ -1.92
SMC4-225ENST00000497203 RPL29P47914 159 aaKnown RBP3.03□□□□□ -1.92
SMC4-225ENST00000497203 ARFIP1P53367 373 aa3.03□□□□□ -1.92
SMC4-225ENST00000497203 OC90Q02509 493 aaPredicted RBP3.03□□□□□ -1.92
SMC4-225ENST00000497203 ST3GAL3Q11203 375 aa3.03□□□□□ -1.92
SMC4-225ENST00000497203 PDK3Q15120 406 aa3.03□□□□□ -1.92
SMC4-225ENST00000497203 SLC5A12Q1EHB4 618 aa3.03□□□□□ -1.92
SMC4-225ENST00000497203 PAGE2BQ5JRK9 111 aa3.03□□□□□ -1.92
SMC4-225ENST00000497203 UTF1Q5T230 341 aa3.03□□□□□ -1.92
SMC4-225ENST00000497203 ZNF658Q5TYW1 1059 aaPredicted RBP3.03□□□□□ -1.92
SMC4-225ENST00000497203 ATF7IP2Q5U623 682 aa3.03□□□□□ -1.92
SMC4-225ENST00000497203 PAMR1Q6UXH9 720 aa3.03□□□□□ -1.92
SMC4-225ENST00000497203 TMEM110Q86TL2 294 aa3.03□□□□□ -1.92
SMC4-225ENST00000497203 HPS6Q86YV9 775 aa3.03□□□□□ -1.92
SMC4-225ENST00000497203 APOBEC3FQ8IUX4 373 aaKnown RBP3.03□□□□□ -1.92
SMC4-225ENST00000497203 SPAG16Q8N0X2 631 aa3.03□□□□□ -1.92
SMC4-225ENST00000497203 MTURNQ8N3F0 131 aa3.03□□□□□ -1.92
SMC4-225ENST00000497203 GPR137CQ8N3F9 429 aa3.03□□□□□ -1.92
SMC4-225ENST00000497203 GTSF1Q8WW33 167 aa3.03□□□□□ -1.92
SMC4-225ENST00000497203 SLC5A11Q8WWX8 675 aa3.03□□□□□ -1.92
SMC4-225ENST00000497203 EMG1Q92979 244 aaKnown RBP3.03□□□□□ -1.92
SMC4-225ENST00000497203 PSMG2Q969U7 264 aa3.03□□□□□ -1.92
SMC4-225ENST00000497203 CITED1Q99966 193 aa3.03□□□□□ -1.92
SMC4-225ENST00000497203 NXF5Q9H1B4 397 aaKnown RBP3.03□□□□□ -1.92
SMC4-225ENST00000497203 ZNF385DQ9H6B1 395 aa3.03□□□□□ -1.92
SMC4-225ENST00000497203 CAB39LQ9H9S4 337 aa3.03□□□□□ -1.92
SMC4-225ENST00000497203 PIPOXQ9P0Z9 390 aa3.03□□□□□ -1.92
SMC4-225ENST00000497203 PDE10AQ9Y233 779 aa3.03□□□□□ -1.92
SMC4-225ENST00000497203 SLCO1B1Q9Y6L6 691 aa3.03□□□□□ -1.92
SMC4-225ENST00000497203 ABCA7Q8IZY2 2146 aa3.02□□□□□ -1.93
SMC4-225ENST00000497203 ANKRD30BQ9BXX2 1392 aa3.02□□□□□ -1.93
SMC4-225ENST00000497203 IGLV8-61A0A075B6I0 122 aa3.02□□□□□ -1.93
SMC4-225ENST00000497203 IGHV2-70DA0A0C4DH43 119 aa3.02□□□□□ -1.93
SMC4-225ENST00000497203 PP2D1A8MPX8 630 aa3.02□□□□□ -1.93
SMC4-225ENST00000497203 TMEM110-MUSTN1A8MSY1 372 aa3.02□□□□□ -1.93
SMC4-225ENST00000497203 K7ENP7 123 aa3.02□□□□□ -1.93
SMC4-225ENST00000497203 SCGNO76038 276 aa3.02□□□□□ -1.93
SMC4-225ENST00000497203 ZNF44P15621 663 aa3.02□□□□□ -1.93
SMC4-225ENST00000497203 HNF1AP20823 631 aa3.02□□□□□ -1.93
SMC4-225ENST00000497203 ZP3P21754 424 aa3.02□□□□□ -1.93
SMC4-225ENST00000497203 ADORA2BP29275 332 aa3.02□□□□□ -1.93
SMC4-225ENST00000497203 IL2RGP31785 369 aa3.02□□□□□ -1.93
SMC4-225ENST00000497203 YWHABP31946 246 aaKnown RBP3.02□□□□□ -1.93
SMC4-225ENST00000497203 CD80P33681 288 aa3.02□□□□□ -1.93
SMC4-225ENST00000497203 MEOX2P50222 304 aa3.02□□□□□ -1.93
SMC4-225ENST00000497203 P2RY4P51582 365 aa3.02□□□□□ -1.93
SMC4-225ENST00000497203 ACTR1AP61163 376 aa3.02□□□□□ -1.93
SMC4-225ENST00000497203 MRPS11P82912 194 aaKnown RBP3.02□□□□□ -1.93
SMC4-225ENST00000497203 EXOC3L2Q2M3D2 409 aa3.02□□□□□ -1.93
SMC4-225ENST00000497203 TIGITQ495A1 244 aa3.02□□□□□ -1.93
SMC4-225ENST00000497203 TMEM52BQ4KMG9 183 aa3.02□□□□□ -1.93
SMC4-225ENST00000497203 LIPNQ5VXI9 398 aa3.02□□□□□ -1.93
SMC4-225ENST00000497203 CASC1Q6TDU7 716 aa3.02□□□□□ -1.93
SMC4-225ENST00000497203 Q6ZR54 194 aa3.02□□□□□ -1.93
SMC4-225ENST00000497203 TPRA1Q86W33 373 aa3.02□□□□□ -1.93
SMC4-225ENST00000497203 GPR65Q8IYL9 337 aa3.02□□□□□ -1.93
SMC4-225ENST00000497203 LINC01561Q8N1V8 128 aa3.02□□□□□ -1.93
SMC4-225ENST00000497203 ZNF525Q8N782 197 aa3.02□□□□□ -1.93
SMC4-225ENST00000497203 RPL3LQ92901 407 aaKnown RBP3.02□□□□□ -1.93
SMC4-225ENST00000497203 FAF2Q96CS3 445 aa3.02□□□□□ -1.93
SMC4-225ENST00000497203 AMDHD1Q96NU7 426 aa3.02□□□□□ -1.93
SMC4-225ENST00000497203 TGM7Q96PF1 710 aa3.02□□□□□ -1.93
SMC4-225ENST00000497203 KIR2DL4Q99706 377 aa3.02□□□□□ -1.93
SMC4-225ENST00000497203 CCT7Q99832 543 aa3.02□□□□□ -1.93
SMC4-225ENST00000497203 C19orf24Q9BVV8 132 aa3.02□□□□□ -1.93
SMC4-225ENST00000497203 GORASP2Q9H8Y8 452 aa3.02□□□□□ -1.93
SMC4-225ENST00000497203 NUDT15Q9NV35 164 aa3.02□□□□□ -1.93
SMC4-225ENST00000497203 APOBEC3BQ9UH17 382 aaKnown RBP3.02□□□□□ -1.93
SMC4-225ENST00000497203 TBK1Q9UHD2 729 aa3.02□□□□□ -1.93
SMC4-225ENST00000497203 PCSK1NQ9UHG2 260 aa3.02□□□□□ -1.93
SMC4-225ENST00000497203 XPO7Q9UIA9 1087 aaKnown RBP3.02□□□□□ -1.93
SMC4-225ENST00000497203 RASD1Q9Y272 281 aa3.02□□□□□ -1.93
SMC4-225ENST00000497203 PPIAL4AQ9Y536 164 aa3.02□□□□□ -1.93
SMC4-225ENST00000497203 PTCH1Q13635 1447 aa3.02□□□□□ -1.93
SMC4-225ENST00000497203 KDRP35968 1356 aa3.01□□□□□ -1.93
SMC4-225ENST00000497203 LOC100131303A0A0U1RQF7 123 aa3.01□□□□□ -1.93
SMC4-225ENST00000497203 SMIM28A0A1B0GU29 152 aa3.01□□□□□ -1.93
SMC4-225ENST00000497203 FRG2CA6NGY1 282 aa3.01□□□□□ -1.93
SMC4-225ENST00000497203 PCP4L1A6NKN8 68 aa3.01□□□□□ -1.93
SMC4-225ENST00000497203 E7ESA3 106 aa3.01□□□□□ -1.93
SMC4-225ENST00000497203 G3V4G9 280 aa3.01□□□□□ -1.93
SMC4-225ENST00000497203 WWP2O00308 870 aa3.01□□□□□ -1.93
SMC4-225ENST00000497203 FCN1O00602 326 aa3.01□□□□□ -1.93
SMC4-225ENST00000497203 LATO43561 262 aa3.01□□□□□ -1.93
SMC4-225ENST00000497203 SRSF10O75494 262 aaKnown RBP3.01□□□□□ -1.93
SMC4-225ENST00000497203 GPX5O75715 221 aa3.01□□□□□ -1.93
SMC4-225ENST00000497203 CA1P00915 261 aaPredicted RBP3.01□□□□□ -1.93
SMC4-225ENST00000497203 HSMCR30P0CW71 290 aa3.01□□□□□ -1.93
SMC4-225ENST00000497203 DBTP11182 482 aaKnown RBP3.01□□□□□ -1.93
SMC4-225ENST00000497203 FASP25445 335 aa3.01□□□□□ -1.93
SMC4-225ENST00000497203 UGT1A3P35503 534 aa3.01□□□□□ -1.93
SMC4-225ENST00000497203 MAP2K1Q02750 393 aaPredicted RBP3.01□□□□□ -1.93
SMC4-225ENST00000497203 NCBP1Q09161 790 aaKnown RBP3.01□□□□□ -1.93
SMC4-225ENST00000497203 IL24Q13007 206 aa3.01□□□□□ -1.93
SMC4-225ENST00000497203 CHIT1Q13231 466 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms