RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 ARHGDIGQ99819 225 aa2.34□□□□□ -2.03
CD46-218ENST00000496723 SPXQ9BT56 116 aa2.34□□□□□ -2.03
CD46-218ENST00000496723 SRXN1Q9BYN0 137 aa2.34□□□□□ -2.03
CD46-218ENST00000496723 NXF3Q9H4D5 531 aaKnown RBP2.34□□□□□ -2.03
CD46-218ENST00000496723 ZDHHC11Q9H8X9 412 aa2.34□□□□□ -2.03
CD46-218ENST00000496723 SOHLH2Q9NX45 425 aa2.34□□□□□ -2.03
CD46-218ENST00000496723 MRPL39Q9NYK5 338 aaKnown RBP2.34□□□□□ -2.03
CD46-218ENST00000496723 RDH8Q9NYR8 311 aa2.34□□□□□ -2.03
CD46-218ENST00000496723 DCDC2Q9UHG0 476 aa2.34□□□□□ -2.03
CD46-218ENST00000496723 SCML2Q9UQR0 700 aa2.34□□□□□ -2.03
CD46-218ENST00000496723 RNF6Q9Y252 685 aa2.34□□□□□ -2.03
CD46-218ENST00000496723 PLLPQ9Y342 182 aa2.34□□□□□ -2.03
CD46-218ENST00000496723 CACNG2Q9Y698 323 aa2.34□□□□□ -2.03
CD46-218ENST00000496723 TRIOBPQ9H2D6 2365 aa2.34□□□□□ -2.04
CD46-218ENST00000496723 H3BMQ9 156 aa2.33□□□□□ -2.04
CD46-218ENST00000496723 TRAF3IP2O43734 574 aaPredicted RBP2.33□□□□□ -2.04
CD46-218ENST00000496723 ADSSP30520 456 aa2.33□□□□□ -2.04
CD46-218ENST00000496723 CTRLP40313 264 aa2.33□□□□□ -2.04
CD46-218ENST00000496723 MAGEA5P43359 124 aa2.33□□□□□ -2.04
CD46-218ENST00000496723 BDKRB1P46663 353 aa2.33□□□□□ -2.04
CD46-218ENST00000496723 PPOXP50336 477 aa2.33□□□□□ -2.04
CD46-218ENST00000496723 ATXN3P54252 364 aaPredicted RBP2.33□□□□□ -2.04
CD46-218ENST00000496723 SPP2Q13103 211 aa2.33□□□□□ -2.04
CD46-218ENST00000496723 ADPRMQ3LIE5 342 aa2.33□□□□□ -2.04
CD46-218ENST00000496723 TFDP3Q5H9I0 405 aa2.33□□□□□ -2.04
CD46-218ENST00000496723 RAB12Q6IQ22 244 aa2.33□□□□□ -2.04
CD46-218ENST00000496723 WDR74Q6RFH5 385 aaPredicted RBP2.33□□□□□ -2.04
CD46-218ENST00000496723 UNQ9370/PRO34162Q6UXP9 181 aa2.33□□□□□ -2.04
CD46-218ENST00000496723 ANKRD37Q7Z713 158 aa2.33□□□□□ -2.04
CD46-218ENST00000496723 LINC01561Q8N1V8 128 aa2.33□□□□□ -2.04
CD46-218ENST00000496723 SUMF2Q8NBJ7 301 aa2.33□□□□□ -2.04
CD46-218ENST00000496723 ZNF740Q8NDX6 193 aa2.33□□□□□ -2.04
CD46-218ENST00000496723 SLC5A11Q8WWX8 675 aa2.33□□□□□ -2.04
CD46-218ENST00000496723 OR1E3Q8WZA6 343 aa2.33□□□□□ -2.04
CD46-218ENST00000496723 C14orf79Q96F83 325 aa2.33□□□□□ -2.04
CD46-218ENST00000496723 MBOAT4Q96T53 435 aa2.33□□□□□ -2.04
CD46-218ENST00000496723 CITED1Q99966 193 aa2.33□□□□□ -2.04
CD46-218ENST00000496723 SLC30A2Q9BRI3 323 aa2.33□□□□□ -2.04
CD46-218ENST00000496723 CRNKL1Q9BZJ0 848 aaKnown RBP2.33□□□□□ -2.04
CD46-218ENST00000496723 MMP26Q9NRE1 261 aa2.33□□□□□ -2.04
CD46-218ENST00000496723 GPRASP1Q5JY77 1395 aa2.33□□□□□ -2.04
CD46-218ENST00000496723 PSMB11A5LHX3 300 aa2.32□□□□□ -2.04
CD46-218ENST00000496723 A8MUA0 341 aa2.32□□□□□ -2.04
CD46-218ENST00000496723 DFNA5O60443 496 aa2.32□□□□□ -2.04
CD46-218ENST00000496723 NPIPB7O75200 414 aa2.32□□□□□ -2.04
CD46-218ENST00000496723 IGHV4-34P06331 123 aa2.32□□□□□ -2.04
CD46-218ENST00000496723 CLUP10909 449 aa2.32□□□□□ -2.04
CD46-218ENST00000496723 FUT1P19526 365 aa2.32□□□□□ -2.04
CD46-218ENST00000496723 DPP4P27487 766 aa2.32□□□□□ -2.04
CD46-218ENST00000496723 AXLP30530 894 aa2.32□□□□□ -2.04
CD46-218ENST00000496723 NUDT1P36639 197 aa2.32□□□□□ -2.04
CD46-218ENST00000496723 RPS10P46783 165 aaKnown RBP2.32□□□□□ -2.04
CD46-218ENST00000496723 STARD6P59095 220 aa2.32□□□□□ -2.04
CD46-218ENST00000496723 EBI3Q14213 229 aa2.32□□□□□ -2.04
CD46-218ENST00000496723 ATXN7L3Q14CW9 347 aaPredicted RBP2.32□□□□□ -2.04
CD46-218ENST00000496723 SYPL1Q16563 259 aa2.32□□□□□ -2.04
CD46-218ENST00000496723 LIPNQ5VXI9 398 aa2.32□□□□□ -2.04
CD46-218ENST00000496723 RAET1GQ6H3X3 334 aa2.32□□□□□ -2.04
CD46-218ENST00000496723 PLBD1Q6P4A8 553 aa2.32□□□□□ -2.04
CD46-218ENST00000496723 ARCQ7LC44 396 aa2.32□□□□□ -2.04
CD46-218ENST00000496723 ERASQ7Z444 233 aa2.32□□□□□ -2.04
CD46-218ENST00000496723 LHFPL4Q7Z7J7 247 aa2.32□□□□□ -2.04
CD46-218ENST00000496723 VRK2Q86Y07 508 aa2.32□□□□□ -2.04
CD46-218ENST00000496723 CBWD2Q8IUF1 395 aa2.32□□□□□ -2.04
CD46-218ENST00000496723 NRMQ8IXM6 262 aa2.32□□□□□ -2.04
CD46-218ENST00000496723 OR5AU1Q8NGC0 362 aa2.32□□□□□ -2.04
CD46-218ENST00000496723 NEIL3Q8TAT5 605 aa2.32□□□□□ -2.04
CD46-218ENST00000496723 DNAJA4Q8WW22 397 aaPredicted RBP2.32□□□□□ -2.04
CD46-218ENST00000496723 STARD4Q96DR4 205 aa2.32□□□□□ -2.04
CD46-218ENST00000496723 CELF6Q96J87 481 aaKnown RBP2.32□□□□□ -2.04
CD46-218ENST00000496723 TMEM237Q96Q45 408 aa2.32□□□□□ -2.04
CD46-218ENST00000496723 TESK2Q96S53 571 aa2.32□□□□□ -2.04
CD46-218ENST00000496723 MAGT1Q9H0U3 335 aa2.32□□□□□ -2.04
CD46-218ENST00000496723 RHOJQ9H4E5 214 aa2.32□□□□□ -2.04
CD46-218ENST00000496723 VAT1LQ9HCJ6 419 aa2.32□□□□□ -2.04
CD46-218ENST00000496723 WRAP73Q9P2S5 460 aaPredicted RBP2.32□□□□□ -2.04
CD46-218ENST00000496723 ANAPC7Q9UJX3 599 aa2.32□□□□□ -2.04
CD46-218ENST00000496723 ANGPTL2Q9UKU9 493 aa2.32□□□□□ -2.04
CD46-218ENST00000496723 PRG3Q9Y2Y8 225 aaPredicted RBP2.32□□□□□ -2.04
CD46-218ENST00000496723 SLCO1B1Q9Y6L6 691 aa2.32□□□□□ -2.04
CD46-218ENST00000496723 TTC21BQ7Z4L5 1316 aa2.32□□□□□ -2.04
CD46-218ENST00000496723 TRBV6-6A0A0A6YYG2 114 aa2.31□□□□□ -2.04
CD46-218ENST00000496723 RNF103-CHMP3A0A140T963 221 aa2.31□□□□□ -2.04
CD46-218ENST00000496723 PP2D1A8MPX8 630 aa2.31□□□□□ -2.04
CD46-218ENST00000496723 SULT2B1O00204 365 aa2.31□□□□□ -2.04
CD46-218ENST00000496723 STX7O15400 261 aaKnown RBP2.31□□□□□ -2.04
CD46-218ENST00000496723 SEC22BO75396 215 aa2.31□□□□□ -2.04
CD46-218ENST00000496723 INSP01308 110 aa2.31□□□□□ -2.04
CD46-218ENST00000496723 ALOX5P09917 674 aa2.31□□□□□ -2.04
CD46-218ENST00000496723 PAICSP22234 425 aaKnown RBP2.31□□□□□ -2.04
CD46-218ENST00000496723 NMT1P30419 496 aaKnown RBP2.31□□□□□ -2.04
CD46-218ENST00000496723 PTGFRP43088 359 aa2.31□□□□□ -2.04
CD46-218ENST00000496723 RABIFP47224 123 aa2.31□□□□□ -2.04
CD46-218ENST00000496723 NAPAP54920 295 aa2.31□□□□□ -2.04
CD46-218ENST00000496723 CSNK1G2P78368 415 aa2.31□□□□□ -2.04
CD46-218ENST00000496723 LAGE3Q14657 143 aa2.31□□□□□ -2.04
CD46-218ENST00000496723 TRIP10Q15642 601 aa2.31□□□□□ -2.04
CD46-218ENST00000496723 NSDHLQ15738 373 aa2.31□□□□□ -2.04
CD46-218ENST00000496723 CEBPEQ15744 281 aa2.31□□□□□ -2.04
CD46-218ENST00000496723 TIGITQ495A1 244 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms