RNA–Protein interactions for RNA: ENST00000496636.1

SH3D21-204, Transcript of SH3 domain containing 21, humanhuman

TSL 3

Gene SH3D21, Length 383 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-204ENST00000496636 SNRPAP09012 282 aaKnown RBP8.53□□□□□ -1.04
SH3D21-204ENST00000496636 SERPINB9P50453 376 aa8.53□□□□□ -1.04
SH3D21-204ENST00000496636 CBX1P83916 185 aa8.53□□□□□ -1.04
SH3D21-204ENST00000496636 DLG1Q12959 904 aa8.53□□□□□ -1.04
SH3D21-204ENST00000496636 CSTF3Q12996 717 aaKnown RBP8.53□□□□□ -1.04
SH3D21-204ENST00000496636 TRAF3Q13114 568 aa8.53□□□□□ -1.04
SH3D21-204ENST00000496636 HEPACAMQ14CZ8 416 aa8.53□□□□□ -1.04
SH3D21-204ENST00000496636 PLPPR5Q32ZL2 321 aa8.53□□□□□ -1.04
SH3D21-204ENST00000496636 IQCCQ4KMZ1 466 aa8.53□□□□□ -1.04
SH3D21-204ENST00000496636 PRR31Q5SQ13 230 aa8.53□□□□□ -1.04
SH3D21-204ENST00000496636 GRTP1Q5TC63 336 aa8.53□□□□□ -1.04
SH3D21-204ENST00000496636 FAM180BQ6P0A1 224 aa8.53□□□□□ -1.04
SH3D21-204ENST00000496636 FCRLAQ7L513 359 aa8.53□□□□□ -1.04
SH3D21-204ENST00000496636 CMC1Q7Z7K0 106 aa8.53□□□□□ -1.04
SH3D21-204ENST00000496636 MISPQ8IVT2 679 aa8.53□□□□□ -1.04
SH3D21-204ENST00000496636 CDYL2Q8N8U2 506 aa8.53□□□□□ -1.04
SH3D21-204ENST00000496636 SEMA6DQ8NFY4 1073 aa8.53□□□□□ -1.04
SH3D21-204ENST00000496636 OR7G2Q8NG99 324 aa8.53□□□□□ -1.04
SH3D21-204ENST00000496636 FAM76AQ8TAV0 307 aa8.53□□□□□ -1.04
SH3D21-204ENST00000496636 MZB1Q8WU39 189 aa8.53□□□□□ -1.04
SH3D21-204ENST00000496636 EXOSC8Q96B26 276 aaKnown RBP8.53□□□□□ -1.04
SH3D21-204ENST00000496636 C3orf49Q96BT1 292 aa8.53□□□□□ -1.04
SH3D21-204ENST00000496636 NXNL1Q96CM4 212 aa8.53□□□□□ -1.04
SH3D21-204ENST00000496636 RTN4RQ9BZR6 473 aa8.53□□□□□ -1.04
SH3D21-204ENST00000496636 BHLHE41Q9C0J9 482 aaPredicted RBP8.53□□□□□ -1.04
SH3D21-204ENST00000496636 FKRPQ9H9S5 495 aa8.53□□□□□ -1.04
SH3D21-204ENST00000496636 BCO1Q9HAY6 547 aa8.53□□□□□ -1.04
SH3D21-204ENST00000496636 MYNNQ9NPC7 610 aa8.53□□□□□ -1.04
SH3D21-204ENST00000496636 MED17Q9NVC6 651 aa8.53□□□□□ -1.04
SH3D21-204ENST00000496636 TMEFF2Q9UIK5 374 aaPredicted RBP8.53□□□□□ -1.04
SH3D21-204ENST00000496636 MCM8Q9UJA3 840 aa8.53□□□□□ -1.04
SH3D21-204ENST00000496636 TRIM49D1C9J1S8 452 aa8.52□□□□□ -1.05
SH3D21-204ENST00000496636 OR7A17O14581 309 aa8.52□□□□□ -1.05
SH3D21-204ENST00000496636 RGS14O43566 566 aa8.52□□□□□ -1.05
SH3D21-204ENST00000496636 GMFGO60234 142 aa8.52□□□□□ -1.05
SH3D21-204ENST00000496636 CD40P25942 277 aa8.52□□□□□ -1.05
SH3D21-204ENST00000496636 RFX3P48380 749 aa8.52□□□□□ -1.05
SH3D21-204ENST00000496636 SNRPD2P62316 118 aaKnown RBP8.52□□□□□ -1.05
SH3D21-204ENST00000496636 ARL13AQ5H913 290 aaPredicted RBP8.52□□□□□ -1.05
SH3D21-204ENST00000496636 KLC3Q6P597 504 aa8.52□□□□□ -1.05
SH3D21-204ENST00000496636 UGT2A3Q6UWM9 527 aa8.52□□□□□ -1.05
SH3D21-204ENST00000496636 B3GLCTQ6Y288 498 aa8.52□□□□□ -1.05
SH3D21-204ENST00000496636 TIFABQ6ZNK6 161 aa8.52□□□□□ -1.05
SH3D21-204ENST00000496636 LILRA2Q8N149 483 aa8.52□□□□□ -1.05
SH3D21-204ENST00000496636 C1orf52Q8N6N3 182 aaKnown RBP8.52□□□□□ -1.05
SH3D21-204ENST00000496636 FAM110BQ8TC76 370 aa8.52□□□□□ -1.05
SH3D21-204ENST00000496636 HPS1Q92902 700 aa8.52□□□□□ -1.05
SH3D21-204ENST00000496636 GCDHQ92947 438 aaPredicted RBP8.52□□□□□ -1.05
SH3D21-204ENST00000496636 CDK15Q96Q40 435 aa8.52□□□□□ -1.05
SH3D21-204ENST00000496636 BBS4Q96RK4 519 aa8.52□□□□□ -1.05
SH3D21-204ENST00000496636 OCEL1Q9H607 264 aa8.52□□□□□ -1.05
SH3D21-204ENST00000496636 SLC35C2Q9NQQ7 365 aa8.52□□□□□ -1.05
SH3D21-204ENST00000496636 DDX18Q9NVP1 670 aaKnown RBP8.52□□□□□ -1.05
SH3D21-204ENST00000496636 METRNQ9UJH8 293 aa8.52□□□□□ -1.05
SH3D21-204ENST00000496636 TMCO1Q9UM00 188 aa8.52□□□□□ -1.05
SH3D21-204ENST00000496636 SNX6Q9UNH7 406 aa8.52□□□□□ -1.05
SH3D21-204ENST00000496636 ACTL7BQ9Y614 415 aa8.52□□□□□ -1.05
SH3D21-204ENST00000496636 TRRAPQ9Y4A5 3859 aa8.52□□□□□ -1.05
SH3D21-204ENST00000496636 PRKDCP78527 4128 aaKnown RBP8.52□□□□□ -1.05
SH3D21-204ENST00000496636 YLPM1P49750 1951 aaKnown RBP8.52□□□□□ -1.05
SH3D21-204ENST00000496636 TMEM89A2RUT3 159 aa8.51□□□□□ -1.05
SH3D21-204ENST00000496636 SERINC4A6NH21 518 aa8.51□□□□□ -1.05
SH3D21-204ENST00000496636 PSMG1O95456 288 aa8.51□□□□□ -1.05
SH3D21-204ENST00000496636 OPN1LWP04000 364 aa8.51□□□□□ -1.05
SH3D21-204ENST00000496636 IL3P08700 152 aa8.51□□□□□ -1.05
SH3D21-204ENST00000496636 IFI6P09912 130 aa8.51□□□□□ -1.05
SH3D21-204ENST00000496636 COL6A2P12110 1019 aa8.51□□□□□ -1.05
SH3D21-204ENST00000496636 HSD3B1P14060 373 aa8.51□□□□□ -1.05
SH3D21-204ENST00000496636 KRT4P19013 534 aa8.51□□□□□ -1.05
SH3D21-204ENST00000496636 HSD3B2P26439 372 aa8.51□□□□□ -1.05
SH3D21-204ENST00000496636 APOBEC3AP31941 199 aaPredicted RBP8.51□□□□□ -1.05
SH3D21-204ENST00000496636 SFTPDP35247 375 aa8.51□□□□□ -1.05
SH3D21-204ENST00000496636 GSTM5P46439 218 aa8.51□□□□□ -1.05
SH3D21-204ENST00000496636 ZNF83P51522 516 aa8.51□□□□□ -1.05
SH3D21-204ENST00000496636 MANFP55145 182 aaKnown RBP8.51□□□□□ -1.05
SH3D21-204ENST00000496636 SPOCK1Q08629 439 aa8.51□□□□□ -1.05
SH3D21-204ENST00000496636 MPP2Q14168 576 aa8.51□□□□□ -1.05
SH3D21-204ENST00000496636 GRAMD1BQ3KR37 738 aa8.51□□□□□ -1.05
SH3D21-204ENST00000496636 VPS26BQ4G0F5 336 aa8.51□□□□□ -1.05
SH3D21-204ENST00000496636 SGO1Q5FBB7 561 aa8.51□□□□□ -1.05
SH3D21-204ENST00000496636 C1QTNF12Q5T7M4 302 aa8.51□□□□□ -1.05
SH3D21-204ENST00000496636 MROH9Q5TGP6 573 aa8.51□□□□□ -1.05
SH3D21-204ENST00000496636 DEF8Q6ZN54 512 aa8.51□□□□□ -1.05
SH3D21-204ENST00000496636 CENPLQ8N0S6 344 aaPredicted RBP8.51□□□□□ -1.05
SH3D21-204ENST00000496636 ARFGAP2Q8N6H7 521 aa8.51□□□□□ -1.05
SH3D21-204ENST00000496636 PTGR2Q8N8N7 351 aaPredicted RBP8.51□□□□□ -1.05
SH3D21-204ENST00000496636 ZNF418Q8TF45 676 aaPredicted RBP8.51□□□□□ -1.05
SH3D21-204ENST00000496636 SELENOMQ8WWX9 145 aa8.51□□□□□ -1.05
SH3D21-204ENST00000496636 SLC9A6Q92581 669 aa8.51□□□□□ -1.05
SH3D21-204ENST00000496636 LMF2Q9BU23 707 aaKnown RBP8.51□□□□□ -1.05
SH3D21-204ENST00000496636 RBM4Q9BWF3 364 aaKnown RBP8.51□□□□□ -1.05
SH3D21-204ENST00000496636 SRXN1Q9BYN0 137 aa8.51□□□□□ -1.05
SH3D21-204ENST00000496636 KCNK9Q9NPC2 374 aa8.51□□□□□ -1.05
SH3D21-204ENST00000496636 CPSF2Q9P2I0 782 aaKnown RBP8.51□□□□□ -1.05
SH3D21-204ENST00000496636 C19orf53Q9UNZ5 99 aaPredicted RBP8.51□□□□□ -1.05
SH3D21-204ENST00000496636 DYSFO75923 2080 aa8.5□□□□□ -1.05
SH3D21-204ENST00000496636 GNG14A0A1W2PPG7 69 aa8.5□□□□□ -1.05
SH3D21-204ENST00000496636 ZNF724A8MTY0 619 aa8.5□□□□□ -1.05
SH3D21-204ENST00000496636 STX16-NPEPL1H3BU86 382 aa8.5□□□□□ -1.05
SH3D21-204ENST00000496636 STX16O14662 325 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms