RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 HOXD1Q9GZZ0 328 aa12.77□□□□□ -0.37
VTI1A-209ENST00000496445 DLL4Q9NR61 685 aa12.77□□□□□ -0.37
VTI1A-209ENST00000496445 PAQR5Q9NXK6 330 aaPredicted RBP12.77□□□□□ -0.37
VTI1A-209ENST00000496445 STOML1Q9UBI4 398 aa12.77□□□□□ -0.37
VTI1A-209ENST00000496445 KCNE5Q9UJ90 142 aa12.77□□□□□ -0.37
VTI1A-209ENST00000496445 EDARQ9UNE0 448 aa12.77□□□□□ -0.37
VTI1A-209ENST00000496445 EMC9Q9Y3B6 208 aa12.77□□□□□ -0.37
VTI1A-209ENST00000496445 ACTL7BQ9Y614 415 aa12.77□□□□□ -0.37
VTI1A-209ENST00000496445 RNF103-CHMP3A0A140T963 221 aa12.76□□□□□ -0.37
VTI1A-209ENST00000496445 ESPNB1AK53 854 aa12.76□□□□□ -0.37
VTI1A-209ENST00000496445 C16orf97H3BN30 126 aa12.76□□□□□ -0.37
VTI1A-209ENST00000496445 RNASET2O00584 256 aaKnown RBP12.76□□□□□ -0.37
VTI1A-209ENST00000496445 CASKO14936 926 aa12.76□□□□□ -0.37
VTI1A-209ENST00000496445 NTN1O95631 604 aa12.76□□□□□ -0.37
VTI1A-209ENST00000496445 MYZAPP0CAP1 466 aa12.76□□□□□ -0.37
VTI1A-209ENST00000496445 ME2P23368 584 aa12.76□□□□□ -0.37
VTI1A-209ENST00000496445 SFTPDP35247 375 aa12.76□□□□□ -0.37
VTI1A-209ENST00000496445 EIF1P41567 113 aaKnown RBP12.76□□□□□ -0.37
VTI1A-209ENST00000496445 KCNJ5P48544 419 aa12.76□□□□□ -0.37
VTI1A-209ENST00000496445 RPL14P50914 215 aaKnown RBP12.76□□□□□ -0.37
VTI1A-209ENST00000496445 SUMO3P55854 103 aaPredicted RBP12.76□□□□□ -0.37
VTI1A-209ENST00000496445 ADAM8P78325 824 aa12.76□□□□□ -0.37
VTI1A-209ENST00000496445 PHC1P78364 1004 aa12.76□□□□□ -0.37
VTI1A-209ENST00000496445 EXOC3L2Q2M3D2 409 aa12.76□□□□□ -0.37
VTI1A-209ENST00000496445 CEP85LQ5SZL2 805 aa12.76□□□□□ -0.37
VTI1A-209ENST00000496445 PDZK1Q5T2W1 519 aa12.76□□□□□ -0.37
VTI1A-209ENST00000496445 C6orf120Q7Z4R8 191 aa12.76□□□□□ -0.37
VTI1A-209ENST00000496445 LILRA2Q8N149 483 aa12.76□□□□□ -0.37
VTI1A-209ENST00000496445 ZNF614Q8N883 585 aa12.76□□□□□ -0.37
VTI1A-209ENST00000496445 OR8J2Q8NGG1 315 aa12.76□□□□□ -0.37
VTI1A-209ENST00000496445 OR4A15Q8NGL6 344 aa12.76□□□□□ -0.37
VTI1A-209ENST00000496445 ARSGQ96EG1 525 aa12.76□□□□□ -0.37
VTI1A-209ENST00000496445 SLC35G5Q96KT7 338 aa12.76□□□□□ -0.37
VTI1A-209ENST00000496445 HS3ST6Q96QI5 342 aa12.76□□□□□ -0.37
VTI1A-209ENST00000496445 SDF2Q99470 211 aa12.76□□□□□ -0.37
VTI1A-209ENST00000496445 NUF2Q9BZD4 464 aa12.76□□□□□ -0.37
VTI1A-209ENST00000496445 NMUR2Q9GZQ4 415 aa12.76□□□□□ -0.37
VTI1A-209ENST00000496445 COQ10BQ9H8M1 238 aa12.76□□□□□ -0.37
VTI1A-209ENST00000496445 PLSCR4Q9NRQ2 329 aa12.76□□□□□ -0.37
VTI1A-209ENST00000496445 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.76□□□□□ -0.37
VTI1A-209ENST00000496445 DTNAQ9Y4J8 743 aa12.76□□□□□ -0.37
VTI1A-209ENST00000496445 FREM1Q5H8C1 2179 aa12.76□□□□□ -0.37
VTI1A-209ENST00000496445 ETV2O00321 342 aaPredicted RBP12.75□□□□□ -0.37
VTI1A-209ENST00000496445 ZNF195O14628 629 aa12.75□□□□□ -0.37
VTI1A-209ENST00000496445 FCMRO60667 390 aa12.75□□□□□ -0.37
VTI1A-209ENST00000496445 DIAPH2O60879 1101 aa12.75□□□□□ -0.37
VTI1A-209ENST00000496445 SOX30O94993 753 aa12.75□□□□□ -0.37
VTI1A-209ENST00000496445 SYNGR4O95473 234 aa12.75□□□□□ -0.37
VTI1A-209ENST00000496445 PLGP00747 810 aaPredicted RBP12.75□□□□□ -0.37
VTI1A-209ENST00000496445 THBDP07204 575 aa12.75□□□□□ -0.37
VTI1A-209ENST00000496445 PRKCAP17252 672 aa12.75□□□□□ -0.37
VTI1A-209ENST00000496445 MATN1P21941 496 aa12.75□□□□□ -0.37
VTI1A-209ENST00000496445 ADH6P28332 368 aa12.75□□□□□ -0.37
VTI1A-209ENST00000496445 AGTR1P30556 359 aa12.75□□□□□ -0.37
VTI1A-209ENST00000496445 CASP9P55211 416 aa12.75□□□□□ -0.37
VTI1A-209ENST00000496445 PPP2R2AP63151 447 aa12.75□□□□□ -0.37
VTI1A-209ENST00000496445 FUT5Q11128 374 aa12.75□□□□□ -0.37
VTI1A-209ENST00000496445 PRR14LQ5THK1 2151 aa12.75□□□□□ -0.37
VTI1A-209ENST00000496445 ANKRD34AQ69YU3 496 aa12.75□□□□□ -0.37
VTI1A-209ENST00000496445 BHLHB9Q6PI77 547 aa12.75□□□□□ -0.37
VTI1A-209ENST00000496445 ANKRD46Q86W74 232 aa12.75□□□□□ -0.37
VTI1A-209ENST00000496445 CXorf67Q86X51 503 aaPredicted RBP12.75□□□□□ -0.37
VTI1A-209ENST00000496445 WFDC11Q8NEX6 87 aa12.75□□□□□ -0.37
VTI1A-209ENST00000496445 RNF128Q8TEB7 428 aa12.75□□□□□ -0.37
VTI1A-209ENST00000496445 ROBO4Q8WZ75 1007 aa12.75□□□□□ -0.37
VTI1A-209ENST00000496445 OSTF1Q92882 214 aa12.75□□□□□ -0.37
VTI1A-209ENST00000496445 TESCQ96BS2 214 aa12.75□□□□□ -0.37
VTI1A-209ENST00000496445 PIK3IP1Q96FE7 263 aa12.75□□□□□ -0.37
VTI1A-209ENST00000496445 ZC3HAV1LQ96H79 300 aaKnown RBP12.75□□□□□ -0.37
VTI1A-209ENST00000496445 NSD1Q96L73 2696 aaPredicted RBP12.75□□□□□ -0.37
VTI1A-209ENST00000496445 DPY30Q9C005 99 aa12.75□□□□□ -0.37
VTI1A-209ENST00000496445 KLHL4Q9C0H6 718 aa12.75□□□□□ -0.37
VTI1A-209ENST00000496445 ZNF350Q9GZX5 532 aa12.75□□□□□ -0.37
VTI1A-209ENST00000496445 CENPHQ9H3R5 247 aa12.75□□□□□ -0.37
VTI1A-209ENST00000496445 MEAF6Q9HAF1 191 aa12.75□□□□□ -0.37
VTI1A-209ENST00000496445 PNPOQ9NVS9 261 aa12.75□□□□□ -0.37
VTI1A-209ENST00000496445 ZNF226Q9NYT6 803 aa12.75□□□□□ -0.37
VTI1A-209ENST00000496445 GPC6Q9Y625 555 aaPredicted RBP12.75□□□□□ -0.37
VTI1A-209ENST00000496445 H3BNH8 94 aa12.74□□□□□ -0.37
VTI1A-209ENST00000496445 ZNF264O43296 627 aa12.74□□□□□ -0.37
VTI1A-209ENST00000496445 SNUPNO95149 360 aaKnown RBP12.74□□□□□ -0.37
VTI1A-209ENST00000496445 NUDT14O95848 222 aa12.74□□□□□ -0.37
VTI1A-209ENST00000496445 C1QCP02747 245 aa12.74□□□□□ -0.37
VTI1A-209ENST00000496445 TUBBP07437 444 aa12.74□□□□□ -0.37
VTI1A-209ENST00000496445 ALDOCP09972 364 aaKnown RBP12.74□□□□□ -0.37
VTI1A-209ENST00000496445 UBL4AP11441 157 aa12.74□□□□□ -0.37
VTI1A-209ENST00000496445 CTBP2P56545 445 aa12.74□□□□□ -0.37
VTI1A-209ENST00000496445 BST1Q10588 318 aa12.74□□□□□ -0.37
VTI1A-209ENST00000496445 SKP2Q13309 424 aa12.74□□□□□ -0.37
VTI1A-209ENST00000496445 ZNF141Q15928 474 aa12.74□□□□□ -0.37
VTI1A-209ENST00000496445 ARHGAP11BQ3KRB8 267 aa12.74□□□□□ -0.37
VTI1A-209ENST00000496445 SLC25A53Q5H9E4 307 aa12.74□□□□□ -0.37
VTI1A-209ENST00000496445 SPANXN4Q5MJ08 99 aa12.74□□□□□ -0.37
VTI1A-209ENST00000496445 PDSS1Q5T2R2 415 aa12.74□□□□□ -0.37
VTI1A-209ENST00000496445 HEPHL1Q6MZM0 1159 aa12.74□□□□□ -0.37
VTI1A-209ENST00000496445 STAC2Q6ZMT1 411 aa12.74□□□□□ -0.37
VTI1A-209ENST00000496445 LRRC34Q8IZ02 419 aa12.74□□□□□ -0.37
VTI1A-209ENST00000496445 TMCO5AQ8N6Q1 288 aa12.74□□□□□ -0.37
VTI1A-209ENST00000496445 OR5W2Q8NH69 310 aa12.74□□□□□ -0.37
VTI1A-209ENST00000496445 RFWD2Q8NHY2 731 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms