RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 GOLGA8TH3BQL2 631 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 GFYI3L273 518 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 RHODO00212 210 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 PSMD3O43242 534 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 KIF5CO60282 957 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 CDC123O75794 336 aaPredicted RBP3.87□□□□□ -1.79
VPS52-222ENST00000495981 RGS11O94810 467 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 TOXO94900 526 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 TSPAN12O95859 305 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 CATP04040 527 aaKnown RBP3.87□□□□□ -1.79
VPS52-222ENST00000495981 HEXBP07686 556 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 ANXA5P08758 320 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 FAM58BPP0C7Q3 252 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 ZNF24P17028 368 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 ADRA2CP18825 462 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 TNFSF8P32971 234 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 RPA3P35244 121 aaPredicted RBP3.87□□□□□ -1.79
VPS52-222ENST00000495981 RPL22P35268 128 aaKnown RBP3.87□□□□□ -1.79
VPS52-222ENST00000495981 CYLC1P35663 651 aaPredicted RBP3.87□□□□□ -1.79
VPS52-222ENST00000495981 SLC1A2P43004 574 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 MAGEA3P43357 314 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 XCR1P46094 333 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 BMXP51813 675 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 CAPZA1P52907 286 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 SLC26A5P58743 744 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 SIRPAP78324 504 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 PRDX1Q06830 199 aaKnown RBP3.87□□□□□ -1.79
VPS52-222ENST00000495981 SCN1BQ07699 218 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 CUL1Q13616 776 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 ABRAXAS2Q15018 415 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 RPS6KA1Q15418 735 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 SPA17Q15506 151 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 EXT1Q16394 746 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 PNLIPRP3Q17RR3 467 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 VWC2Q2TAL6 325 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 KLHL38Q2WGJ6 581 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 CMPK2Q5EBM0 449 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 ANKRD22Q5VYY1 191 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 ZNF470Q6ECI4 717 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 DHRS7BQ6IAN0 325 aaPredicted RBP3.87□□□□□ -1.79
VPS52-222ENST00000495981 LRRC8BQ6P9F7 803 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 PAPD4Q6PIY7 484 aaKnown RBP3.87□□□□□ -1.79
VPS52-222ENST00000495981 CES3Q6UWW8 571 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 NHLRC1Q6VVB1 395 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 MBOAT1Q6ZNC8 495 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 Q6ZPA2 131 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 TRILQ7L0X0 811 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 PEX26Q7Z412 305 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 CPEB2Q7Z5Q1 589 aaKnown RBP3.87□□□□□ -1.79
VPS52-222ENST00000495981 DOLPP1Q86YN1 238 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 SLC13A5Q86YT5 568 aaPredicted RBP3.87□□□□□ -1.79
VPS52-222ENST00000495981 EGFL6Q8IUX8 553 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 TUSC5Q8IXB3 177 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 DDIASQ8IXT1 998 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 CPSF7Q8N684 471 aaKnown RBP3.87□□□□□ -1.79
VPS52-222ENST00000495981 SLC5A8Q8N695 610 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 TSPAN14Q8NG11 270 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 OR5T3Q8NGG3 340 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 OCC1Q8TAD7 63 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 ELP5Q8TE02 316 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 ERGIC1Q969X5 290 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 RERGQ96A58 199 aaPredicted RBP3.87□□□□□ -1.79
VPS52-222ENST00000495981 EME1Q96AY2 570 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 TM4SF19Q96DZ7 209 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 PDLIM5Q96HC4 596 aaKnown RBP3.87□□□□□ -1.79
VPS52-222ENST00000495981 TIMP4Q99727 224 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 OLFM1Q99784 485 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 ZNF559Q9BR84 538 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 BDH2Q9BUT1 245 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 FRMD8P1Q9BZ68 369 aaPredicted RBP3.87□□□□□ -1.79
VPS52-222ENST00000495981 IL22Q9GZX6 179 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 AICDAQ9GZX7 198 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 SPNS1Q9H2V7 528 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 TSPY26PQ9H489 355 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 NOL11Q9H8H0 719 aaKnown RBP3.87□□□□□ -1.79
VPS52-222ENST00000495981 PNRC2Q9NPJ4 139 aaKnown RBP3.87□□□□□ -1.79
VPS52-222ENST00000495981 KLHL1Q9NR64 748 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 ZNF223Q9UK11 482 aaPredicted RBP3.87□□□□□ -1.79
VPS52-222ENST00000495981 NPIPA1Q9UND3 350 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 CDC14AQ9UNH5 594 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.87□□□□□ -1.79
VPS52-222ENST00000495981 RYR1P21817 5038 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 NCKAP5O14513 1909 aa3.87□□□□□ -1.79
VPS52-222ENST00000495981 KIAA1549Q9HCM3 1950 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 ZCWPW2A0A1B0GU75 182 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 PINLYPA6NC86 204 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 GOLGA6L9A6NEM1 432 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 SAGE2PA6NJ88 616 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 H3BMM5 538 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 SGK494L7N484 410 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 PLPP2O43688 288 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 GALR3O60755 368 aaPredicted RBP3.86□□□□□ -1.79
VPS52-222ENST00000495981 DNAJB6O75190 326 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 VAPBO95292 243 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 GAS8O95995 478 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 IFNB1P01574 187 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 GBAP04062 536 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 SP1P08047 785 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 MPC1LP0DKB6 136 aa3.86□□□□□ -1.79
VPS52-222ENST00000495981 TPSB2P20231 275 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms