RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 CNOT2Q9NZN8 540 aaKnown RBP12.52□□□□□ -0.41
GPC1-209ENST00000495100 HYKKA2RU49 373 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 NOTOA8MTQ0 251 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 HRKO00198 91 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 CLEC3AO75596 197 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 SEMG1P04279 462 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 LIMS3P0CW19 117 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 LIMS4P0CW20 117 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 GSTM3P21266 225 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 EEF1A2Q05639 463 aaKnown RBP12.51□□□□□ -0.41
GPC1-209ENST00000495100 MLLT11Q13015 90 aaPredicted RBP12.51□□□□□ -0.41
GPC1-209ENST00000495100 RUNX2Q13950 521 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 KANSL1Q7Z3B3 1105 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 RDH10Q8IZV5 341 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 KDM8Q8N371 416 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 CSNK1A1LQ8N752 337 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 THEM6Q8WUY1 208 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 FAM3CQ92520 227 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 SNAPC3Q92966 411 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 MYADMQ96S97 322 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 BTBD2Q9BX70 525 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 CDCA4Q9BXL8 241 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 TMEM138Q9NPI0 162 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 MKL2Q9ULH7 1088 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 PCDHGA4Q9Y5G9 962 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 FGF19O95750 216 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 ACP2P11117 423 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 DRD2P14416 443 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 ELK1P19419 428 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 GIFP27352 417 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 RAB15P59190 212 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 BIKQ13323 160 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 PGGHGQ32M88 737 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 C1orf189Q5VU69 101 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 SLC48A1Q6P1K1 146 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 Q6ZSR6 202 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 DNAAF1Q8NEP3 725 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 RPLP0P6Q8NHW5 317 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 RSC1A1Q92681 617 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 NMNAT3Q96T66 252 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 NDC1Q9BTX1 674 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 A4GALTQ9NPC4 353 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 KRCC1Q9NPI7 259 aaPredicted RBP12.51□□□□□ -0.41
GPC1-209ENST00000495100 SIDT1Q9NXL6 827 aaKnown RBP12.51□□□□□ -0.41
GPC1-209ENST00000495100 PPIEQ9UNP9 301 aaKnown RBP12.51□□□□□ -0.41
GPC1-209ENST00000495100 ZNF443Q9Y2A4 671 aaPredicted RBP12.51□□□□□ -0.41
GPC1-209ENST00000495100 NOX1Q9Y5S8 564 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 MDC1Q14676 2089 aaKnown RBP12.51□□□□□ -0.41
GPC1-209ENST00000495100 TRBV2A0A0J9YWF9 115 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 C17orf113A0A1B0GUU1 675 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 SLC9B1P1A6NJY1 282 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 EIF1AYO14602 144 aaKnown RBP12.51□□□□□ -0.41
GPC1-209ENST00000495100 LIPCP11150 499 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 GABRB1P18505 474 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 MAKP20794 623 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 GFOD2Q3B7J2 385 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 SLC25A35Q3KQZ1 300 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 ZNF836Q6ZNA1 936 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 TTLL10Q6ZVT0 673 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 LUZP2Q86TE4 346 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 TOMM5Q8N4H5 51 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 OR5W2Q8NH69 310 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 TRMT10AQ8TBZ6 339 aaKnown RBP12.51□□□□□ -0.41
GPC1-209ENST00000495100 ULBP3Q9BZM4 244 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 HOXD1Q9GZZ0 328 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 BTBD1Q9H0C5 482 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 NKX2-4Q9H2Z4 354 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 PRDM7Q9NQW5 492 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 PLCXD1Q9NUJ7 323 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 STMN3Q9NZ72 180 aa12.51□□□□□ -0.41
GPC1-209ENST00000495100 A0A0G2JPF8 293 aa12.5□□□□□ -0.41
GPC1-209ENST00000495100 A0A1W2PQ72 361 aa12.5□□□□□ -0.41
GPC1-209ENST00000495100 DUXAA6NLW8 204 aa12.5□□□□□ -0.41
GPC1-209ENST00000495100 C17orf51A8MQB3 221 aa12.5□□□□□ -0.41
GPC1-209ENST00000495100 HNRNPCL3B7ZW38 293 aa12.5□□□□□ -0.41
GPC1-209ENST00000495100 HNRNPCL4P0DMR1 293 aa12.5□□□□□ -0.41
GPC1-209ENST00000495100 F3P13726 295 aa12.5□□□□□ -0.41
GPC1-209ENST00000495100 MAOAP21397 527 aa12.5□□□□□ -0.41
GPC1-209ENST00000495100 VASPP50552 380 aaPredicted RBP12.5□□□□□ -0.41
GPC1-209ENST00000495100 FGFBP1Q14512 234 aa12.5□□□□□ -0.41
GPC1-209ENST00000495100 DCST2Q5T1A1 773 aa12.5□□□□□ -0.41
GPC1-209ENST00000495100 ANKRD54Q6NXT1 300 aa12.5□□□□□ -0.41
GPC1-209ENST00000495100 MINDY2Q8NBR6 621 aa12.5□□□□□ -0.41
GPC1-209ENST00000495100 ACOT11Q8WXI4 607 aaPredicted RBP12.5□□□□□ -0.41
GPC1-209ENST00000495100 TGM7Q96PF1 710 aa12.5□□□□□ -0.41
GPC1-209ENST00000495100 TAPBPLQ9BX59 468 aa12.5□□□□□ -0.41
GPC1-209ENST00000495100 AICDAQ9GZX7 198 aa12.5□□□□□ -0.41
GPC1-209ENST00000495100 OR10A4Q9H209 315 aa12.5□□□□□ -0.41
GPC1-209ENST00000495100 MARK1Q9P0L2 795 aa12.5□□□□□ -0.41
GPC1-209ENST00000495100 A0A1B0GTH9 108 aa12.5□□□□□ -0.41
GPC1-209ENST00000495100 CHST10O43529 356 aa12.5□□□□□ -0.41
GPC1-209ENST00000495100 OR2B3O76000 313 aa12.5□□□□□ -0.41
GPC1-209ENST00000495100 GPANK1O95872 356 aa12.5□□□□□ -0.41
GPC1-209ENST00000495100 BTG2P78543 158 aa12.5□□□□□ -0.41
GPC1-209ENST00000495100 ABATP80404 500 aa12.5□□□□□ -0.41
GPC1-209ENST00000495100 RHAGQ02094 409 aa12.5□□□□□ -0.41
GPC1-209ENST00000495100 FUT5Q11128 374 aa12.5□□□□□ -0.41
GPC1-209ENST00000495100 SNTA1Q13424 505 aa12.5□□□□□ -0.41
GPC1-209ENST00000495100 NTRK2Q16620 822 aa12.5□□□□□ -0.41
GPC1-209ENST00000495100 CCDC190Q86UF4 302 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms