RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 LINC00032P0C843 101 aa8.56□□□□□ -1.04
UBR4-216ENST00000494503 PAX1P15863 534 aa8.56□□□□□ -1.04
UBR4-216ENST00000494503 DDX5P17844 614 aaKnown RBP8.56□□□□□ -1.04
UBR4-216ENST00000494503 SDC1P18827 310 aa8.56□□□□□ -1.04
UBR4-216ENST00000494503 ENPP1P22413 925 aa8.56□□□□□ -1.04
UBR4-216ENST00000494503 ADH6P28332 368 aa8.56□□□□□ -1.04
UBR4-216ENST00000494503 ECHS1P30084 290 aa8.56□□□□□ -1.04
UBR4-216ENST00000494503 SOAT1P35610 550 aa8.56□□□□□ -1.04
UBR4-216ENST00000494503 C21orf58P58505 322 aa8.56□□□□□ -1.04
UBR4-216ENST00000494503 ITGADQ13349 1161 aa8.56□□□□□ -1.04
UBR4-216ENST00000494503 PPA1Q15181 289 aa8.56□□□□□ -1.04
UBR4-216ENST00000494503 CHRFAM7AQ494W8 412 aa8.56□□□□□ -1.04
UBR4-216ENST00000494503 TRMT10CQ7L0Y3 403 aaKnown RBP8.56□□□□□ -1.04
UBR4-216ENST00000494503 ZNF100Q8IYN0 542 aa8.56□□□□□ -1.04
UBR4-216ENST00000494503 UBE2J2Q8N2K1 259 aa8.56□□□□□ -1.04
UBR4-216ENST00000494503 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.56□□□□□ -1.04
UBR4-216ENST00000494503 POC1BQ8TC44 478 aa8.56□□□□□ -1.04
UBR4-216ENST00000494503 AGR3Q8TD06 166 aa8.56□□□□□ -1.04
UBR4-216ENST00000494503 ADAMTS15Q8TE58 950 aa8.56□□□□□ -1.04
UBR4-216ENST00000494503 ZFP90Q8TF47 636 aa8.56□□□□□ -1.04
UBR4-216ENST00000494503 HTRA1Q92743 480 aa8.56□□□□□ -1.04
UBR4-216ENST00000494503 DNAJA3Q96EY1 480 aa8.56□□□□□ -1.04
UBR4-216ENST00000494503 OR5B2Q96R09 309 aa8.56□□□□□ -1.04
UBR4-216ENST00000494503 CCT7Q99832 543 aa8.56□□□□□ -1.04
UBR4-216ENST00000494503 RHNO1Q9BSD3 238 aa8.56□□□□□ -1.04
UBR4-216ENST00000494503 BTBD2Q9BX70 525 aa8.56□□□□□ -1.04
UBR4-216ENST00000494503 OR10A4Q9H209 315 aa8.56□□□□□ -1.04
UBR4-216ENST00000494503 BARX1Q9HBU1 254 aaPredicted RBP8.56□□□□□ -1.04
UBR4-216ENST00000494503 TNFRSF12AQ9NP84 129 aa8.56□□□□□ -1.04
UBR4-216ENST00000494503 CISD1Q9NZ45 108 aaKnown RBP8.56□□□□□ -1.04
UBR4-216ENST00000494503 KLHL9Q9P2J3 617 aa8.56□□□□□ -1.04
UBR4-216ENST00000494503 PRSS50Q9UI38 385 aa8.56□□□□□ -1.04
UBR4-216ENST00000494503 FAF1Q9UNN5 650 aaPredicted RBP8.56□□□□□ -1.04
UBR4-216ENST00000494503 FBN1P35555 2871 aaKnown RBP8.55□□□□□ -1.04
UBR4-216ENST00000494503 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.55□□□□□ -1.04
UBR4-216ENST00000494503 A0A1W2PPM1 405 aa8.55□□□□□ -1.04
UBR4-216ENST00000494503 CCT8L1PA6NM43 557 aa8.55□□□□□ -1.04
UBR4-216ENST00000494503 A8MV72 311 aaPredicted RBP8.55□□□□□ -1.04
UBR4-216ENST00000494503 G3V2L1 256 aa8.55□□□□□ -1.04
UBR4-216ENST00000494503 COPEO14579 308 aa8.55□□□□□ -1.04
UBR4-216ENST00000494503 ABCD4O14678 606 aa8.55□□□□□ -1.04
UBR4-216ENST00000494503 AZIN1O14977 448 aa8.55□□□□□ -1.04
UBR4-216ENST00000494503 TLX2O43763 284 aaPredicted RBP8.55□□□□□ -1.04
UBR4-216ENST00000494503 RAMP1O60894 148 aa8.55□□□□□ -1.04
UBR4-216ENST00000494503 GCM2O75603 506 aaPredicted RBP8.55□□□□□ -1.04
UBR4-216ENST00000494503 IGHV3-9P01782 118 aa8.55□□□□□ -1.04
UBR4-216ENST00000494503 PROCP04070 461 aa8.55□□□□□ -1.04
UBR4-216ENST00000494503 HMGN2P05204 90 aaKnown RBP8.55□□□□□ -1.04
UBR4-216ENST00000494503 NGFRP08138 427 aa8.55□□□□□ -1.04
UBR4-216ENST00000494503 LINGO3P0C6S8 592 aa8.55□□□□□ -1.04
UBR4-216ENST00000494503 NEFHP12036 1026 aa8.55□□□□□ -1.04
UBR4-216ENST00000494503 CPA3P15088 417 aa8.55□□□□□ -1.04
UBR4-216ENST00000494503 PSMA4P25789 261 aaKnown RBP8.55□□□□□ -1.04
UBR4-216ENST00000494503 ELK4P28324 431 aa8.55□□□□□ -1.04
UBR4-216ENST00000494503 CCT5P48643 541 aa8.55□□□□□ -1.04
UBR4-216ENST00000494503 P2RX1P51575 399 aa8.55□□□□□ -1.04
UBR4-216ENST00000494503 NAA20P61599 178 aa8.55□□□□□ -1.04
UBR4-216ENST00000494503 CHRNEQ04844 493 aa8.55□□□□□ -1.04
UBR4-216ENST00000494503 KRTAP1-1Q07627 177 aa8.55□□□□□ -1.04
UBR4-216ENST00000494503 RASGEF1BQ0VAM2 473 aa8.55□□□□□ -1.04
UBR4-216ENST00000494503 P2RY6Q15077 328 aa8.55□□□□□ -1.04
UBR4-216ENST00000494503 CCDC153Q494R4 210 aa8.55□□□□□ -1.04
UBR4-216ENST00000494503 DCST2Q5T1A1 773 aa8.55□□□□□ -1.04
UBR4-216ENST00000494503 SLC22A25Q6T423 547 aa8.55□□□□□ -1.04
UBR4-216ENST00000494503 CLEC2AQ6UVW9 174 aa8.55□□□□□ -1.04
UBR4-216ENST00000494503 CBLN3Q6UW01 205 aa8.55□□□□□ -1.04
UBR4-216ENST00000494503 R3HCC1LQ7Z5L2 792 aaKnown RBP8.55□□□□□ -1.04
UBR4-216ENST00000494503 IFT20Q8IY31 132 aa8.55□□□□□ -1.04
UBR4-216ENST00000494503 GSPT2Q8IYD1 628 aaKnown RBP8.55□□□□□ -1.04
UBR4-216ENST00000494503 GABRG1Q8N1C3 465 aa8.55□□□□□ -1.04
UBR4-216ENST00000494503 OR2T11Q8NH01 316 aa8.55□□□□□ -1.04
UBR4-216ENST00000494503 LILRB1Q8NHL6 650 aaPredicted RBP8.55□□□□□ -1.04
UBR4-216ENST00000494503 UBLCP1Q8WVY7 318 aaPredicted RBP8.55□□□□□ -1.04
UBR4-216ENST00000494503 IGFBPL1Q8WX77 278 aa8.55□□□□□ -1.04
UBR4-216ENST00000494503 ARL8AQ96BM9 186 aa8.55□□□□□ -1.04
UBR4-216ENST00000494503 FAM120BQ96EK7 910 aaKnown RBP8.55□□□□□ -1.04
UBR4-216ENST00000494503 GIMAP5Q96F15 307 aa8.55□□□□□ -1.04
UBR4-216ENST00000494503 RHOXF2Q9BQY4 288 aa8.55□□□□□ -1.04
UBR4-216ENST00000494503 C12orf65Q9H3J6 166 aaKnown RBP8.55□□□□□ -1.04
UBR4-216ENST00000494503 ACSS1Q9NUB1 689 aaPredicted RBP8.55□□□□□ -1.04
UBR4-216ENST00000494503 EMCNQ9ULC0 261 aa8.55□□□□□ -1.04
UBR4-216ENST00000494503 GPC6Q9Y625 555 aaPredicted RBP8.55□□□□□ -1.04
UBR4-216ENST00000494503 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.55□□□□□ -1.041e-6■■■■□ 25.3
UBR4-216ENST00000494503 A0A1W2PQD3 144 aa8.54□□□□□ -1.04
UBR4-216ENST00000494503 CIB4A0PJX0 185 aa8.54□□□□□ -1.04
UBR4-216ENST00000494503 FAM234BA2RU67 622 aa8.54□□□□□ -1.04
UBR4-216ENST00000494503 DPRXA6NFQ7 191 aa8.54□□□□□ -1.04
UBR4-216ENST00000494503 TMEM114B3SHH9 223 aa8.54□□□□□ -1.04
UBR4-216ENST00000494503 OVOL3O00110 214 aa8.54□□□□□ -1.04
UBR4-216ENST00000494503 KIF2AO00139 706 aaPredicted RBP8.54□□□□□ -1.04
UBR4-216ENST00000494503 OIP5O43482 229 aa8.54□□□□□ -1.04
UBR4-216ENST00000494503 CD5LO43866 347 aa8.54□□□□□ -1.04
UBR4-216ENST00000494503 RAD51DO75771 328 aa8.54□□□□□ -1.04
UBR4-216ENST00000494503 HSPA4LO95757 839 aa8.54□□□□□ -1.04
UBR4-216ENST00000494503 IFI6P09912 130 aa8.54□□□□□ -1.04
UBR4-216ENST00000494503 DANCRP0C864 163 aa8.54□□□□□ -1.04
UBR4-216ENST00000494503 TFPIP10646 304 aa8.54□□□□□ -1.04
UBR4-216ENST00000494503 UBL4AP11441 157 aa8.54□□□□□ -1.04
UBR4-216ENST00000494503 GGT1P19440 569 aa8.54□□□□□ -1.04
UBR4-216ENST00000494503 ASMTP46597 345 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms