RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 TOR1AIP2Q8NFQ8 470 aa12.25□□□□□ -0.45
COL1A1-208ENST00000494334 OR52P1PQ8NH57 321 aa12.25□□□□□ -0.45
COL1A1-208ENST00000494334 OR5W2Q8NH69 310 aa12.25□□□□□ -0.45
COL1A1-208ENST00000494334 NFKBIDQ8NI38 313 aa12.25□□□□□ -0.45
COL1A1-208ENST00000494334 POC1BQ8TC44 478 aa12.25□□□□□ -0.45
COL1A1-208ENST00000494334 GPR119Q8TDV5 335 aa12.25□□□□□ -0.45
COL1A1-208ENST00000494334 SSC4DQ8WTU2 575 aa12.25□□□□□ -0.45
COL1A1-208ENST00000494334 WDR60Q8WVS4 1066 aa12.25□□□□□ -0.45
COL1A1-208ENST00000494334 ZBTB8AQ96BR9 441 aa12.25□□□□□ -0.45
COL1A1-208ENST00000494334 ZNF524Q96C55 264 aa12.25□□□□□ -0.45
COL1A1-208ENST00000494334 RCN3Q96D15 328 aa12.25□□□□□ -0.45
COL1A1-208ENST00000494334 ARSGQ96EG1 525 aa12.25□□□□□ -0.45
COL1A1-208ENST00000494334 FAM215AQ9Y5M1 114 aa12.25□□□□□ -0.45
COL1A1-208ENST00000494334 PCNX3Q9H6A9 2034 aa12.25□□□□□ -0.45
COL1A1-208ENST00000494334 C5orf58C9J3I9 102 aa12.24□□□□□ -0.45
COL1A1-208ENST00000494334 FAM47E-STBD1D6RA91 191 aa12.24□□□□□ -0.45
COL1A1-208ENST00000494334 LINC01387J3KSC0 135 aa12.24□□□□□ -0.45
COL1A1-208ENST00000494334 ZG16O60844 167 aa12.24□□□□□ -0.45
COL1A1-208ENST00000494334 DNAJA2O60884 412 aa12.24□□□□□ -0.45
COL1A1-208ENST00000494334 NUDT14O95848 222 aa12.24□□□□□ -0.45
COL1A1-208ENST00000494334 NID1P14543 1247 aa12.24□□□□□ -0.45
COL1A1-208ENST00000494334 CPN1P15169 458 aa12.24□□□□□ -0.45
COL1A1-208ENST00000494334 ZNF708P17019 499 aa12.24□□□□□ -0.45
COL1A1-208ENST00000494334 PSMA4P25789 261 aaKnown RBP12.24□□□□□ -0.45
COL1A1-208ENST00000494334 GZMMP51124 257 aa12.24□□□□□ -0.45
COL1A1-208ENST00000494334 PER3P56645 1201 aa12.24□□□□□ -0.45
COL1A1-208ENST00000494334 CLDN18P56856 261 aa12.24□□□□□ -0.45
COL1A1-208ENST00000494334 ADORA2A-AS1P86434 159 aa12.24□□□□□ -0.45
COL1A1-208ENST00000494334 SRYQ05066 204 aa12.24□□□□□ -0.45
COL1A1-208ENST00000494334 CBFBQ13951 182 aa12.24□□□□□ -0.45
COL1A1-208ENST00000494334 SCARB2Q14108 478 aa12.24□□□□□ -0.45
COL1A1-208ENST00000494334 RABL3Q5HYI8 236 aa12.24□□□□□ -0.45
COL1A1-208ENST00000494334 MTFR2Q6P444 385 aa12.24□□□□□ -0.45
COL1A1-208ENST00000494334 NET1Q7Z628 596 aaPredicted RBP12.24□□□□□ -0.45
COL1A1-208ENST00000494334 PTOV1Q86YD1 416 aa12.24□□□□□ -0.45
COL1A1-208ENST00000494334 CMIPQ8IY22 773 aa12.24□□□□□ -0.45
COL1A1-208ENST00000494334 GTPBP8Q8N3Z3 284 aaPredicted RBP12.24□□□□□ -0.45
COL1A1-208ENST00000494334 MARVELD2Q8N4S9 558 aa12.24□□□□□ -0.45
COL1A1-208ENST00000494334 TMCO5AQ8N6Q1 288 aa12.24□□□□□ -0.45
COL1A1-208ENST00000494334 OR8J3Q8NGG0 315 aa12.24□□□□□ -0.45
COL1A1-208ENST00000494334 OR10A6Q8NH74 314 aa12.24□□□□□ -0.45
COL1A1-208ENST00000494334 BBS10Q8TAM1 723 aa12.24□□□□□ -0.45
COL1A1-208ENST00000494334 PHF10Q8WUB8 498 aaKnown RBP12.24□□□□□ -0.45
COL1A1-208ENST00000494334 CNOT9Q92600 299 aaKnown RBP12.24□□□□□ -0.45
COL1A1-208ENST00000494334 SH3GL1Q99961 368 aa12.24□□□□□ -0.45
COL1A1-208ENST00000494334 EXOSC3Q9NQT5 275 aaKnown RBP12.24□□□□□ -0.45
COL1A1-208ENST00000494334 GID8Q9NWU2 228 aa12.24□□□□□ -0.45
COL1A1-208ENST00000494334 CAMK2AQ9UQM7 478 aa12.24□□□□□ -0.45
COL1A1-208ENST00000494334 CHST2Q9Y4C5 530 aa12.24□□□□□ -0.45
COL1A1-208ENST00000494334 MED12Q93074 2177 aa12.23□□□□□ -0.45
COL1A1-208ENST00000494334 UBR5O95071 2799 aaPredicted RBP12.23□□□□□ -0.45
COL1A1-208ENST00000494334 C7orf72A4D263 438 aa12.23□□□□□ -0.45
COL1A1-208ENST00000494334 KDM4EB2RXH2 506 aaPredicted RBP12.23□□□□□ -0.45
COL1A1-208ENST00000494334 H3BML4 177 aa12.23□□□□□ -0.45
COL1A1-208ENST00000494334 AIM2O14862 343 aa12.23□□□□□ -0.45
COL1A1-208ENST00000494334 ADAM11O75078 769 aa12.23□□□□□ -0.45
COL1A1-208ENST00000494334 FAM107AO95990 144 aa12.23□□□□□ -0.45
COL1A1-208ENST00000494334 HOXD4P09016 255 aaPredicted RBP12.23□□□□□ -0.45
COL1A1-208ENST00000494334 PABPC4LP0CB38 370 aaKnown RBP12.23□□□□□ -0.45
COL1A1-208ENST00000494334 PEPDP12955 493 aa12.23□□□□□ -0.45
COL1A1-208ENST00000494334 ETS2P15036 469 aa12.23□□□□□ -0.45
COL1A1-208ENST00000494334 ZNF17P17021 662 aa12.23□□□□□ -0.45
COL1A1-208ENST00000494334 PRKCAP17252 672 aa12.23□□□□□ -0.45
COL1A1-208ENST00000494334 SLC6A2P23975 617 aa12.23□□□□□ -0.45
COL1A1-208ENST00000494334 PTGER4P35408 488 aa12.23□□□□□ -0.45
COL1A1-208ENST00000494334 CCR4P51679 360 aa12.23□□□□□ -0.45
COL1A1-208ENST00000494334 SUCLG1P53597 346 aaKnown RBP12.23□□□□□ -0.45
COL1A1-208ENST00000494334 CLDN15P56746 228 aa12.23□□□□□ -0.45
COL1A1-208ENST00000494334 EEF1A1P68104 462 aaKnown RBP12.23□□□□□ -0.45
COL1A1-208ENST00000494334 RBBP4Q09028 425 aa12.23□□□□□ -0.45
COL1A1-208ENST00000494334 PMPCAQ10713 525 aa12.23□□□□□ -0.45
COL1A1-208ENST00000494334 FOXF1Q12946 379 aa12.23□□□□□ -0.45
COL1A1-208ENST00000494334 QPRTQ15274 297 aa12.23□□□□□ -0.45
COL1A1-208ENST00000494334 BCL2A1Q16548 175 aa12.23□□□□□ -0.45
COL1A1-208ENST00000494334 CYP51A1Q16850 503 aa12.23□□□□□ -0.45
COL1A1-208ENST00000494334 LIN52Q52LA3 116 aa12.23□□□□□ -0.45
COL1A1-208ENST00000494334 MRPL2Q5T653 305 aaKnown RBP12.23□□□□□ -0.45
COL1A1-208ENST00000494334 C1orf185Q5T7R7 199 aa12.23□□□□□ -0.45
COL1A1-208ENST00000494334 TMEM211Q6ICI0 200 aa12.23□□□□□ -0.45
COL1A1-208ENST00000494334 REEP3Q6NUK4 255 aa12.23□□□□□ -0.45
COL1A1-208ENST00000494334 B3GNT6Q6ZMB0 384 aa12.23□□□□□ -0.45
COL1A1-208ENST00000494334 ZNF836Q6ZNA1 936 aa12.23□□□□□ -0.45
COL1A1-208ENST00000494334 SERPINA11Q86U17 422 aa12.23□□□□□ -0.45
COL1A1-208ENST00000494334 ANKS4BQ8N8V4 417 aa12.23□□□□□ -0.45
COL1A1-208ENST00000494334 HIPK4Q8NE63 616 aa12.23□□□□□ -0.45
COL1A1-208ENST00000494334 FBXO27Q8NI29 283 aa12.23□□□□□ -0.45
COL1A1-208ENST00000494334 ZPLD1Q8TCW7 415 aa12.23□□□□□ -0.45
COL1A1-208ENST00000494334 CMTM5Q96DZ9 223 aa12.23□□□□□ -0.45
COL1A1-208ENST00000494334 RNF145Q96MT1 663 aa12.23□□□□□ -0.45
COL1A1-208ENST00000494334 TTYH2Q9BSA4 534 aa12.23□□□□□ -0.45
COL1A1-208ENST00000494334 RSPO3Q9BXY4 272 aaPredicted RBP12.23□□□□□ -0.45
COL1A1-208ENST00000494334 RLIMQ9NVW2 624 aa12.23□□□□□ -0.45
COL1A1-208ENST00000494334 DNAJB12Q9NXW2 375 aaKnown RBP12.23□□□□□ -0.45
COL1A1-208ENST00000494334 ZNF232Q9UNY5 417 aa12.23□□□□□ -0.45
COL1A1-208ENST00000494334 ZNF443Q9Y2A4 671 aaPredicted RBP12.23□□□□□ -0.45
COL1A1-208ENST00000494334 IFT52Q9Y366 437 aa12.23□□□□□ -0.45
COL1A1-208ENST00000494334 GPC6Q9Y625 555 aaPredicted RBP12.23□□□□□ -0.45
COL1A1-208ENST00000494334 AP4B1Q9Y6B7 739 aa12.23□□□□□ -0.45
COL1A1-208ENST00000494334 MYO18BQ8IUG5 2567 aa12.23□□□□□ -0.45
COL1A1-208ENST00000494334 MYO7BQ6PIF6 2116 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms