RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 FJX1Q86VR8 437 aa11.3□□□□□ -0.6
TRA2A-209ENST00000494255 DOLPP1Q86YN1 238 aa11.3□□□□□ -0.6
TRA2A-209ENST00000494255 RELTQ969Z4 430 aa11.3□□□□□ -0.6
TRA2A-209ENST00000494255 ZNF607Q96SK3 696 aa11.3□□□□□ -0.6
TRA2A-209ENST00000494255 TIMP4Q99727 224 aa11.3□□□□□ -0.6
TRA2A-209ENST00000494255 SPATA5L1Q9BVQ7 753 aa11.3□□□□□ -0.6
TRA2A-209ENST00000494255 PNPLA3Q9NST1 481 aa11.3□□□□□ -0.6
TRA2A-209ENST00000494255 MED17Q9NVC6 651 aa11.3□□□□□ -0.6
TRA2A-209ENST00000494255 ALKBH4Q9NXW9 302 aa11.3□□□□□ -0.6
TRA2A-209ENST00000494255 STOML1Q9UBI4 398 aa11.3□□□□□ -0.6
TRA2A-209ENST00000494255 CAMK2AQ9UQM7 478 aa11.3□□□□□ -0.6
TRA2A-209ENST00000494255 AP3M1Q9Y2T2 418 aa11.3□□□□□ -0.6
TRA2A-209ENST00000494255 WDR1O75083 606 aa11.3□□□□□ -0.6
TRA2A-209ENST00000494255 AGFG2O95081 481 aa11.3□□□□□ -0.6
TRA2A-209ENST00000494255 THBS1P07996 1170 aa11.3□□□□□ -0.6
TRA2A-209ENST00000494255 HOXD4P09016 255 aaPredicted RBP11.3□□□□□ -0.6
TRA2A-209ENST00000494255 GABRA1P14867 456 aa11.3□□□□□ -0.6
TRA2A-209ENST00000494255 ZNF17P17021 662 aa11.3□□□□□ -0.6
TRA2A-209ENST00000494255 PGCP20142 388 aa11.3□□□□□ -0.6
TRA2A-209ENST00000494255 POU3F2P20265 443 aaPredicted RBP11.3□□□□□ -0.6
TRA2A-209ENST00000494255 EIF1P41567 113 aaKnown RBP11.3□□□□□ -0.6
TRA2A-209ENST00000494255 SF3B4Q15427 424 aaKnown RBP eCLIP11.3□□□□□ -0.63e-11■■■■■ 37.6
TRA2A-209ENST00000494255 ADRM1Q16186 407 aa11.3□□□□□ -0.6
TRA2A-209ENST00000494255 ZSWIM7Q19AV6 140 aa11.3□□□□□ -0.6
TRA2A-209ENST00000494255 ZNF311Q5JNZ3 666 aa11.3□□□□□ -0.6
TRA2A-209ENST00000494255 MRPL2Q5T653 305 aaKnown RBP11.3□□□□□ -0.6
TRA2A-209ENST00000494255 HACD2Q6Y1H2 254 aa11.3□□□□□ -0.6
TRA2A-209ENST00000494255 NET1Q7Z628 596 aaPredicted RBP11.3□□□□□ -0.6
TRA2A-209ENST00000494255 VRK2Q86Y07 508 aa11.3□□□□□ -0.6
TRA2A-209ENST00000494255 PTOV1Q86YD1 416 aa11.3□□□□□ -0.6
TRA2A-209ENST00000494255 ZNF440Q8IYI8 595 aa11.3□□□□□ -0.6
TRA2A-209ENST00000494255 GTPBP8Q8N3Z3 284 aaPredicted RBP11.3□□□□□ -0.6
TRA2A-209ENST00000494255 FAM26EQ8N5C1 309 aa11.3□□□□□ -0.6
TRA2A-209ENST00000494255 FAM71CQ8NEG0 241 aa11.3□□□□□ -0.6
TRA2A-209ENST00000494255 BCAS4Q8TDM0 211 aa11.3□□□□□ -0.6
TRA2A-209ENST00000494255 GPR119Q8TDV5 335 aa11.3□□□□□ -0.6
TRA2A-209ENST00000494255 ARSGQ96EG1 525 aa11.3□□□□□ -0.6
TRA2A-209ENST00000494255 HOPXQ9BPY8 73 aaPredicted RBP11.3□□□□□ -0.6
TRA2A-209ENST00000494255 PIF1Q9H611 641 aa11.3□□□□□ -0.6
TRA2A-209ENST00000494255 EXOSC3Q9NQT5 275 aaKnown RBP11.3□□□□□ -0.6
TRA2A-209ENST00000494255 ZNF443Q9Y2A4 671 aaPredicted RBP11.3□□□□□ -0.6
TRA2A-209ENST00000494255 OR2M5A3KFT3 312 aa11.29□□□□□ -0.6
TRA2A-209ENST00000494255 C7orf72A4D263 438 aa11.29□□□□□ -0.6
TRA2A-209ENST00000494255 CLDN24A6NM45 220 aa11.29□□□□□ -0.6
TRA2A-209ENST00000494255 SERPINB7O75635 380 aa11.29□□□□□ -0.6
TRA2A-209ENST00000494255 PABPC4LP0CB38 370 aaKnown RBP11.29□□□□□ -0.6
TRA2A-209ENST00000494255 PEPDP12955 493 aa11.29□□□□□ -0.6
TRA2A-209ENST00000494255 ACVR2AP27037 513 aa11.29□□□□□ -0.6
TRA2A-209ENST00000494255 RYKP34925 604 aa11.29□□□□□ -0.6
TRA2A-209ENST00000494255 PCGF2P35227 344 aa11.29□□□□□ -0.6
TRA2A-209ENST00000494255 SLC6A8P48029 635 aa11.29□□□□□ -0.6
TRA2A-209ENST00000494255 B3GALT5-AS1P59052 145 aa11.29□□□□□ -0.6
TRA2A-209ENST00000494255 INTS11Q5TA45 600 aaKnown RBP11.29□□□□□ -0.6
TRA2A-209ENST00000494255 FAM91A1Q658Y4 838 aa11.29□□□□□ -0.6
TRA2A-209ENST00000494255 ERICH5Q6P6B1 374 aa11.29□□□□□ -0.6
TRA2A-209ENST00000494255 C3P1Q6ZMU1 363 aa11.29□□□□□ -0.6
TRA2A-209ENST00000494255 ZNF836Q6ZNA1 936 aa11.29□□□□□ -0.6
TRA2A-209ENST00000494255 ZZZ3Q8IYH5 903 aa11.29□□□□□ -0.6
TRA2A-209ENST00000494255 OR5M1Q8NGP8 315 aa11.29□□□□□ -0.6
TRA2A-209ENST00000494255 TMEM234Q8WY98 164 aa11.29□□□□□ -0.6
TRA2A-209ENST00000494255 CNOT9Q92600 299 aaKnown RBP11.29□□□□□ -0.6
TRA2A-209ENST00000494255 PRDM14Q9GZV8 571 aa11.29□□□□□ -0.6
TRA2A-209ENST00000494255 TAGLN3Q9UI15 199 aa11.29□□□□□ -0.6
TRA2A-209ENST00000494255 GPC6Q9Y625 555 aaPredicted RBP11.29□□□□□ -0.6
TRA2A-209ENST00000494255 POLEQ07864 2286 aa11.28□□□□□ -0.6
TRA2A-209ENST00000494255 PRORSD1PA6NEY8 169 aa11.28□□□□□ -0.6
TRA2A-209ENST00000494255 AHRRA9YTQ3 701 aa11.28□□□□□ -0.6
TRA2A-209ENST00000494255 E9PLN8 166 aa11.28□□□□□ -0.6
TRA2A-209ENST00000494255 H0Y3Z8 333 aa11.28□□□□□ -0.6
TRA2A-209ENST00000494255 H3BML4 177 aa11.28□□□□□ -0.6
TRA2A-209ENST00000494255 SEMA7AO75326 666 aa11.28□□□□□ -0.6
TRA2A-209ENST00000494255 LINGO3P0C6S8 592 aa11.28□□□□□ -0.6
TRA2A-209ENST00000494255 UQCRBP14927 111 aa11.28□□□□□ -0.6
TRA2A-209ENST00000494255 CPN1P15169 458 aa11.28□□□□□ -0.6
TRA2A-209ENST00000494255 ME2P23368 584 aa11.28□□□□□ -0.6
TRA2A-209ENST00000494255 AQP1P29972 269 aa11.28□□□□□ -0.6
TRA2A-209ENST00000494255 PTGER4P35408 488 aa11.28□□□□□ -0.6
TRA2A-209ENST00000494255 CPA2P48052 419 aa11.28□□□□□ -0.6
TRA2A-209ENST00000494255 STARP49675 285 aa11.28□□□□□ -0.6
TRA2A-209ENST00000494255 LHX2P50458 406 aa11.28□□□□□ -0.6
TRA2A-209ENST00000494255 SRYQ05066 204 aa11.28□□□□□ -0.6
TRA2A-209ENST00000494255 FOXF1Q12946 379 aa11.28□□□□□ -0.6
TRA2A-209ENST00000494255 QPRTQ15274 297 aa11.28□□□□□ -0.6
TRA2A-209ENST00000494255 BCL2A1Q16548 175 aa11.28□□□□□ -0.6
TRA2A-209ENST00000494255 VMACQ2NL98 169 aa11.28□□□□□ -0.6
TRA2A-209ENST00000494255 EMC4Q5J8M3 183 aa11.28□□□□□ -0.6
TRA2A-209ENST00000494255 DCST1Q5T197 706 aa11.28□□□□□ -0.6
TRA2A-209ENST00000494255 RNF220Q5VTB9 566 aa11.28□□□□□ -0.6
TRA2A-209ENST00000494255 TMEM211Q6ICI0 200 aa11.28□□□□□ -0.6
TRA2A-209ENST00000494255 ULK2Q8IYT8 1036 aa11.28□□□□□ -0.6
TRA2A-209ENST00000494255 ZNF563Q8TA94 476 aa11.28□□□□□ -0.6
TRA2A-209ENST00000494255 ST8SIA1Q92185 356 aa11.28□□□□□ -0.6
TRA2A-209ENST00000494255 SMPDL3BQ92485 455 aa11.28□□□□□ -0.6
TRA2A-209ENST00000494255 WDYHV1Q96HA8 205 aa11.28□□□□□ -0.6
TRA2A-209ENST00000494255 REXO5Q96IC2 774 aaKnown RBP11.28□□□□□ -0.6
TRA2A-209ENST00000494255 MRGPRX4Q96LA9 322 aa11.28□□□□□ -0.6
TRA2A-209ENST00000494255 RNF145Q96MT1 663 aa11.28□□□□□ -0.6
TRA2A-209ENST00000494255 KLHDC3Q9BQ90 382 aa11.28□□□□□ -0.6
TRA2A-209ENST00000494255 VKORC1Q9BQB6 163 aa11.28□□□□□ -0.6
TRA2A-209ENST00000494255 ARL8BQ9NVJ2 186 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms