RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 ZNF836Q6ZNA1 936 aa10.67□□□□□ -0.7
RFC4-214ENST00000494047 RTL4Q6ZR62 310 aa10.67□□□□□ -0.7
RFC4-214ENST00000494047 ZNF550Q7Z398 422 aa10.67□□□□□ -0.7
RFC4-214ENST00000494047 LUZP2Q86TE4 346 aa10.67□□□□□ -0.7
RFC4-214ENST00000494047 VRK2Q86Y07 508 aa10.67□□□□□ -0.7
RFC4-214ENST00000494047 COX18Q8N8Q8 333 aa10.67□□□□□ -0.7
RFC4-214ENST00000494047 DTWD2Q8NBA8 298 aa10.67□□□□□ -0.7
RFC4-214ENST00000494047 AVL9Q8NBF6 648 aa10.67□□□□□ -0.7
RFC4-214ENST00000494047 TMEM145Q8NBT3 493 aa10.67□□□□□ -0.7
RFC4-214ENST00000494047 OR4Q3Q8NH05 313 aa10.67□□□□□ -0.7
RFC4-214ENST00000494047 C17orf50Q8WW18 174 aa10.67□□□□□ -0.7
RFC4-214ENST00000494047 SPRYD4Q8WW59 207 aaPredicted RBP10.67□□□□□ -0.7
RFC4-214ENST00000494047 TMEM203Q969S6 136 aa10.67□□□□□ -0.7
RFC4-214ENST00000494047 RERGQ96A58 199 aaPredicted RBP10.67□□□□□ -0.7
RFC4-214ENST00000494047 ERLEC1Q96DZ1 483 aa10.67□□□□□ -0.7
RFC4-214ENST00000494047 TM4SF19Q96DZ7 209 aa10.67□□□□□ -0.7
RFC4-214ENST00000494047 C10orf90Q96M02 699 aa10.67□□□□□ -0.7
RFC4-214ENST00000494047 ZNF578Q96N58 590 aaPredicted RBP10.67□□□□□ -0.7
RFC4-214ENST00000494047 NEDD4LQ96PU5 975 aa10.67□□□□□ -0.7
RFC4-214ENST00000494047 GPA33Q99795 319 aa10.67□□□□□ -0.7
RFC4-214ENST00000494047 TM9SF2Q99805 663 aa10.67□□□□□ -0.7
RFC4-214ENST00000494047 APOOQ9BUR5 198 aa10.67□□□□□ -0.7
RFC4-214ENST00000494047 TMED9Q9BVK6 235 aa10.67□□□□□ -0.7
RFC4-214ENST00000494047 LGR4Q9BXB1 951 aa10.67□□□□□ -0.7
RFC4-214ENST00000494047 SLC17A9Q9BYT1 436 aa10.67□□□□□ -0.7
RFC4-214ENST00000494047 DPAGT1Q9H3H5 408 aa10.67□□□□□ -0.7
RFC4-214ENST00000494047 PAQR5Q9NXK6 330 aaPredicted RBP10.67□□□□□ -0.7
RFC4-214ENST00000494047 SIDT1Q9NXL6 827 aaKnown RBP10.67□□□□□ -0.7
RFC4-214ENST00000494047 ACTR10Q9NZ32 417 aa10.67□□□□□ -0.7
RFC4-214ENST00000494047 CARD8Q9Y2G2 431 aa10.67□□□□□ -0.7
RFC4-214ENST00000494047 PRKAB1Q9Y478 270 aa10.67□□□□□ -0.7
RFC4-214ENST00000494047 SLC22A7Q9Y694 548 aa10.67□□□□□ -0.7
RFC4-214ENST00000494047 COL4A2P08572 1712 aa10.67□□□□□ -0.7
RFC4-214ENST00000494047 TICRRQ7Z2Z1 1910 aa10.67□□□□□ -0.7
RFC4-214ENST00000494047 NAP1L6A6NFF2 107 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 OR5K4A6NMS3 321 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 HSPB2A8KAH6 182 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 C12orf71A8MTZ7 269 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 ZNF879B4DU55 563 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 BHLHE40O14503 412 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 PDCD5O14737 125 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 PLA2G10O15496 165 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 ZNF749O43361 778 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 PRAF2O60831 178 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 ECDO95905 644 aaPredicted RBP10.66□□□□□ -0.7
RFC4-214ENST00000494047 SMIM10L1P0DMW3 83 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 ARSBP15848 533 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 ZNF24P17028 368 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 SLC6A1P30531 599 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 GJA4P35212 333 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 PDX1P52945 283 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 NRG3P56975 720 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 SCAND1P57086 179 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 BTN3A2P78410 334 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 POU6F2P78424 691 aaPredicted RBP10.66□□□□□ -0.7
RFC4-214ENST00000494047 ILF3Q12906 894 aaKnown RBP eCLIP10.66□□□□□ -0.7
RFC4-214ENST00000494047 HSPB2Q16082 182 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.66□□□□□ -0.76e-6■■■■□ 22.6
RFC4-214ENST00000494047 EOGTQ5NDL2 527 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 CLEC12AQ5QGZ9 265 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 C6orf132Q5T0Z8 1188 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 DCST2Q5T1A1 773 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 ZNF57Q68EA5 555 aaPredicted RBP10.66□□□□□ -0.7
RFC4-214ENST00000494047 MAMSTRQ6ZN01 415 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 SPATC1Q76KD6 591 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 FGD2Q7Z6J4 655 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 CPOQ8IVL8 374 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 ZNF440Q8IYI8 595 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 GHDCQ8N2G8 530 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 LRRC17Q8N6Y2 441 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 PRSS33Q8NF86 280 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 OR5W2Q8NH69 310 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 ANGPTL6Q8NI99 470 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 CLDN23Q96B33 292 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 SMIM10Q96HG1 83 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 RADILQ96JH8 1075 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 RNF170Q96K19 258 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 LRRC3BQ96PB8 259 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 FCRL4Q96PJ5 515 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 OR2M2Q96R28 347 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 SDF2Q99470 211 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 MIR1-1HGQ9H1L0 117 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 SRMSQ9H3Y6 488 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 KLHL31Q9H511 634 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 EMC7Q9NPA0 242 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 EQTNQ9NQ60 294 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 HINT3Q9NQE9 182 aaKnown RBP10.66□□□□□ -0.7
RFC4-214ENST00000494047 ACOXLQ9NUZ1 547 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 EXTL2Q9UBQ6 330 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 SLC7A7Q9UM01 511 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 DAPP1Q9UN19 280 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 NCKAP1Q9Y2A7 1128 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 GPR52Q9Y2T5 361 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 GPSM3Q9Y4H4 160 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 PIAS3Q9Y6X2 628 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 MAU2Q9Y6X3 613 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 MDC1Q14676 2089 aaKnown RBP10.66□□□□□ -0.7
RFC4-214ENST00000494047 CACNA1IQ9P0X4 2223 aa10.66□□□□□ -0.7
RFC4-214ENST00000494047 PRSS38A1L453 326 aa10.65□□□□□ -0.7
RFC4-214ENST00000494047 C7orf66A4D0T2 115 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms