RNA–Protein interactions for RNA: ENST00000494046.5

ABCA2-222, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 5

Gene ABCA2, Length 1,622 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-222ENST00000494046 VSTM2LQ96N03 204 aa17.11■□□□□ 0.33
ABCA2-222ENST00000494046 ADOQ96SZ5 270 aa17.11■□□□□ 0.33
ABCA2-222ENST00000494046 FOLH1BQ9HBA9 442 aa17.11■□□□□ 0.33
ABCA2-222ENST00000494046 MIEF1Q9NQG6 463 aa17.11■□□□□ 0.33
ABCA2-222ENST00000494046 BTNL2Q9UIR0 455 aa17.11■□□□□ 0.33
ABCA2-222ENST00000494046 RNF103-CHMP3A0A140T963 221 aa17.1■□□□□ 0.33
ABCA2-222ENST00000494046 PRAMEF25A6NGN4 478 aa17.1■□□□□ 0.33
ABCA2-222ENST00000494046 TO15178 435 aa17.1■□□□□ 0.33
ABCA2-222ENST00000494046 CLOCKO15516 846 aa17.1■□□□□ 0.33
ABCA2-222ENST00000494046 DEAF1O75398 565 aaPredicted RBP17.1■□□□□ 0.33
ABCA2-222ENST00000494046 CPSF4O95639 269 aaKnown RBP17.1■□□□□ 0.33
ABCA2-222ENST00000494046 LAMP1P11279 417 aa17.1■□□□□ 0.33
ABCA2-222ENST00000494046 IGFBP2P18065 325 aa17.1■□□□□ 0.33
ABCA2-222ENST00000494046 TLE4Q04727 773 aa17.1■□□□□ 0.33
ABCA2-222ENST00000494046 DCST1Q5T197 706 aa17.1■□□□□ 0.33
ABCA2-222ENST00000494046 SLC30A6Q6NXT4 461 aa17.1■□□□□ 0.33
ABCA2-222ENST00000494046 FKBP9P1Q75LS8 142 aa17.1■□□□□ 0.33
ABCA2-222ENST00000494046 WDR53Q7Z5U6 358 aaPredicted RBP17.1■□□□□ 0.33
ABCA2-222ENST00000494046 SERPINA11Q86U17 422 aa17.1■□□□□ 0.33
ABCA2-222ENST00000494046 FAM83FQ8NEG4 500 aaPredicted RBP17.1■□□□□ 0.33
ABCA2-222ENST00000494046 OR4N2Q8NGD1 307 aa17.1■□□□□ 0.33
ABCA2-222ENST00000494046 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.1■□□□□ 0.33
ABCA2-222ENST00000494046 COQ8BQ96D53 544 aa17.1■□□□□ 0.33
ABCA2-222ENST00000494046 COL21A1Q96P44 957 aa17.1■□□□□ 0.33
ABCA2-222ENST00000494046 TREX2Q9BQ50 279 aaPredicted RBP17.1■□□□□ 0.33
ABCA2-222ENST00000494046 ATP6V1HQ9UI12 483 aa17.1■□□□□ 0.33
ABCA2-222ENST00000494046 OAZ3Q9UMX2 235 aa17.1■□□□□ 0.33
ABCA2-222ENST00000494046 EXO1Q9UQ84 846 aaKnown RBP17.1■□□□□ 0.33
ABCA2-222ENST00000494046 CAMK2AQ9UQM7 478 aa17.1■□□□□ 0.33
ABCA2-222ENST00000494046 OTOGQ6ZRI0 2925 aa17.1■□□□□ 0.33
ABCA2-222ENST00000494046 MYO1GB0I1T2 1018 aa17.1■□□□□ 0.33
ABCA2-222ENST00000494046 CLIC1O00299 241 aa17.1■□□□□ 0.33
ABCA2-222ENST00000494046 SNPHO15079 494 aa17.1■□□□□ 0.33
ABCA2-222ENST00000494046 TNFAIP8O95379 198 aa17.1■□□□□ 0.33
ABCA2-222ENST00000494046 HOXD4P09016 255 aaPredicted RBP17.1■□□□□ 0.33
ABCA2-222ENST00000494046 LINGO3P0C6S8 592 aa17.1■□□□□ 0.33
ABCA2-222ENST00000494046 BMP7P18075 431 aa17.1■□□□□ 0.33
ABCA2-222ENST00000494046 ELAVL4P26378 380 aaKnown RBP17.1■□□□□ 0.33
ABCA2-222ENST00000494046 RPL3P39023 403 aaKnown RBP17.1■□□□□ 0.33
ABCA2-222ENST00000494046 MC3RP41968 323 aa17.1■□□□□ 0.33
ABCA2-222ENST00000494046 GSTM5P46439 218 aa17.1■□□□□ 0.33
ABCA2-222ENST00000494046 TMEM107Q6UX40 140 aa17.1■□□□□ 0.33
ABCA2-222ENST00000494046 ZNF621Q6ZSS3 439 aa17.1■□□□□ 0.33
ABCA2-222ENST00000494046 SLC44A2Q8IWA5 706 aaPredicted RBP17.1■□□□□ 0.33
ABCA2-222ENST00000494046 FBXO30Q8TB52 745 aa17.1■□□□□ 0.33
ABCA2-222ENST00000494046 MYCBPQ99417 103 aaPredicted RBP17.1■□□□□ 0.33
ABCA2-222ENST00000494046 MYNNQ9NPC7 610 aa17.1■□□□□ 0.33
ABCA2-222ENST00000494046 INTS1Q8N201 2190 aaKnown RBP17.09■□□□□ 0.33
ABCA2-222ENST00000494046 OR6C70A6NIJ9 312 aa17.09■□□□□ 0.33
ABCA2-222ENST00000494046 PDLIM1O00151 329 aa17.09■□□□□ 0.33
ABCA2-222ENST00000494046 PLOD3O60568 738 aa17.09■□□□□ 0.33
ABCA2-222ENST00000494046 PPIBP23284 216 aaKnown RBP17.09■□□□□ 0.33
ABCA2-222ENST00000494046 ZNF155Q12901 538 aaPredicted RBP17.09■□□□□ 0.33
ABCA2-222ENST00000494046 ACSF3Q4G176 576 aaPredicted RBP17.09■□□□□ 0.33
ABCA2-222ENST00000494046 NHSL2Q5HYW2 709 aa17.09■□□□□ 0.33
ABCA2-222ENST00000494046 RIPPLY2Q5TAB7 128 aa17.09■□□□□ 0.33
ABCA2-222ENST00000494046 VASNQ6EMK4 673 aa17.09■□□□□ 0.33
ABCA2-222ENST00000494046 ERICH5Q6P6B1 374 aa17.09■□□□□ 0.33
ABCA2-222ENST00000494046 TMEM81Q6P7N7 255 aa17.09■□□□□ 0.33
ABCA2-222ENST00000494046 R3HCC1LQ7Z5L2 792 aaKnown RBP17.09■□□□□ 0.33
ABCA2-222ENST00000494046 WDSUB1Q8N9V3 476 aa17.09■□□□□ 0.33
ABCA2-222ENST00000494046 EFHD2Q96C19 240 aaPredicted RBP17.09■□□□□ 0.33
ABCA2-222ENST00000494046 TMCO6Q96DC7 493 aa17.09■□□□□ 0.33
ABCA2-222ENST00000494046 C14orf79Q96F83 325 aa17.09■□□□□ 0.33
ABCA2-222ENST00000494046 SLC47A1Q96FL8 570 aa17.09■□□□□ 0.33
ABCA2-222ENST00000494046 BHLHE41Q9C0J9 482 aaPredicted RBP17.09■□□□□ 0.33
ABCA2-222ENST00000494046 GLIPR2Q9H4G4 154 aa17.09■□□□□ 0.33
ABCA2-222ENST00000494046 REEP4Q9H6H4 257 aa17.09■□□□□ 0.33
ABCA2-222ENST00000494046 MAGIXQ9H6Y5 334 aa17.09■□□□□ 0.33
ABCA2-222ENST00000494046 ZNF696Q9H7X3 374 aa17.09■□□□□ 0.33
ABCA2-222ENST00000494046 DCAF13Q9NV06 445 aaKnown RBP17.09■□□□□ 0.33
ABCA2-222ENST00000494046 TAS2R9Q9NYW1 312 aa17.09■□□□□ 0.33
ABCA2-222ENST00000494046 PCDHGB3Q9Y5G1 929 aa17.09■□□□□ 0.33
ABCA2-222ENST00000494046 HCFC1P51610 2035 aa17.09■□□□□ 0.33
ABCA2-222ENST00000494046 C17orf51A8MQB3 221 aa17.08■□□□□ 0.32
ABCA2-222ENST00000494046 PRSS23O95084 383 aa17.08■□□□□ 0.32
ABCA2-222ENST00000494046 GPX2P18283 190 aa17.08■□□□□ 0.32
ABCA2-222ENST00000494046 IL12BP29460 328 aa17.08■□□□□ 0.32
ABCA2-222ENST00000494046 KRT20P35900 424 aa17.08■□□□□ 0.32
ABCA2-222ENST00000494046 SNTA1Q13424 505 aa17.08■□□□□ 0.32
ABCA2-222ENST00000494046 SNTB1Q13884 538 aaKnown RBP17.08■□□□□ 0.32
ABCA2-222ENST00000494046 OR5M10Q6IEU7 315 aa17.08■□□□□ 0.32
ABCA2-222ENST00000494046 ANKRD26P1Q6NSI1 321 aa17.08■□□□□ 0.32
ABCA2-222ENST00000494046 CARM1Q86X55 608 aa17.08■□□□□ 0.32
ABCA2-222ENST00000494046 DMRTC2Q8IXT2 367 aaPredicted RBP17.08■□□□□ 0.32
ABCA2-222ENST00000494046 CLECL1Q8IZS7 167 aa17.08■□□□□ 0.32
ABCA2-222ENST00000494046 C10orf111Q8N326 155 aa17.08■□□□□ 0.32
ABCA2-222ENST00000494046 NAXEQ8NCW5 288 aa17.08■□□□□ 0.32
ABCA2-222ENST00000494046 ABTB1Q969K4 478 aaPredicted RBP17.08■□□□□ 0.32
ABCA2-222ENST00000494046 ATAD3AQ9NVI7 634 aa17.08■□□□□ 0.32
ABCA2-222ENST00000494046 OR10H1Q9Y4A9 318 aa17.08■□□□□ 0.32
ABCA2-222ENST00000494046 AHRRA9YTQ3 701 aa17.07■□□□□ 0.32
ABCA2-222ENST00000494046 RNASET2O00584 256 aaKnown RBP17.07■□□□□ 0.32
ABCA2-222ENST00000494046 TSPAN2O60636 221 aa17.07■□□□□ 0.32
ABCA2-222ENST00000494046 MT-ND1P03886 318 aa17.07■□□□□ 0.32
ABCA2-222ENST00000494046 NTSP30990 170 aa17.07■□□□□ 0.32
ABCA2-222ENST00000494046 MYBPC1Q00872 1141 aa17.07■□□□□ 0.32
ABCA2-222ENST00000494046 ENPP6Q6UWR7 440 aa17.07■□□□□ 0.32
ABCA2-222ENST00000494046 TFAP2CQ92754 450 aa17.07■□□□□ 0.32
ABCA2-222ENST00000494046 MTERF3Q96E29 417 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms