RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 EGR3Q06889 387 aa10.81□□□□□ -0.68
BRCA1-222ENST00000493919 TRAM1Q15629 374 aa10.81□□□□□ -0.68
BRCA1-222ENST00000493919 BCL7AQ4VC05 210 aa10.81□□□□□ -0.68
BRCA1-222ENST00000493919 C14orf28Q4W4Y0 310 aa10.81□□□□□ -0.68
BRCA1-222ENST00000493919 FBXO42Q6P3S6 717 aa10.81□□□□□ -0.68
BRCA1-222ENST00000493919 ZNF773Q6PK81 442 aa10.81□□□□□ -0.68
BRCA1-222ENST00000493919 C17orf107Q6ZR85 190 aa10.81□□□□□ -0.68
BRCA1-222ENST00000493919 COLCA1Q6ZS62 124 aa10.81□□□□□ -0.68
BRCA1-222ENST00000493919 SH2D5Q6ZV89 423 aa10.81□□□□□ -0.68
BRCA1-222ENST00000493919 SHFQ7M4L6 423 aa10.81□□□□□ -0.68
BRCA1-222ENST00000493919 KCNMB4Q86W47 210 aa10.81□□□□□ -0.68
BRCA1-222ENST00000493919 FAM181AQ8N9Y4 354 aa10.81□□□□□ -0.68
BRCA1-222ENST00000493919 BPIFB6Q8NFQ5 453 aa10.81□□□□□ -0.68
BRCA1-222ENST00000493919 WBP1Q96G27 269 aa10.81□□□□□ -0.68
BRCA1-222ENST00000493919 KATNB1Q9BVA0 655 aa10.81□□□□□ -0.68
BRCA1-222ENST00000493919 NLNQ9BYT8 704 aa10.81□□□□□ -0.68
BRCA1-222ENST00000493919 REG4Q9BYZ8 158 aa10.81□□□□□ -0.68
BRCA1-222ENST00000493919 POT1Q9NUX5 634 aa10.81□□□□□ -0.68
BRCA1-222ENST00000493919 KLHL28Q9NXS3 571 aa10.81□□□□□ -0.68
BRCA1-222ENST00000493919 GDF2Q9UK05 429 aaPredicted RBP10.81□□□□□ -0.68
BRCA1-222ENST00000493919 MOKQ9UQ07 419 aa10.81□□□□□ -0.68
BRCA1-222ENST00000493919 TEX264Q9Y6I9 313 aa10.81□□□□□ -0.68
BRCA1-222ENST00000493919 U3KQA8 63 aa10.81□□□□□ -0.68
BRCA1-222ENST00000493919 PCNX2A6NKB5 2137 aa10.81□□□□□ -0.68
BRCA1-222ENST00000493919 C5orf52A6NGY3 159 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 ALPLP05186 524 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 ALPPP05187 535 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 HEXAP06865 529 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 SNRPB2P08579 225 aaKnown RBP10.8□□□□□ -0.68
BRCA1-222ENST00000493919 OR56A5P0C7T3 313 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 FCGR1AP12314 374 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 F3P13726 295 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 IDSP22304 550 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 DDTP30046 118 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 SLC1A2P43004 574 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 RAB5BP61020 215 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 PKIAP61925 76 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 CAV1Q03135 178 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 PRKCDQ05655 676 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 BOP1Q14137 746 aaKnown RBP10.8□□□□□ -0.68
BRCA1-222ENST00000493919 PCGF3Q3KNV8 242 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 SPANXN3Q5MJ09 141 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 AVPI1Q5T686 147 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 ABLIM2Q6H8Q1 611 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 ACSM5Q6NUN0 579 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 ZDHHC24Q6UX98 284 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 MBOAT1Q6ZNC8 495 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 OR5D18Q8NGL1 313 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 SLC37A2Q8TED4 501 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 SLC39A7Q92504 469 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 DPF1Q92782 380 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 ART4Q93070 314 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 ZNF479Q96JC4 524 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 MRI1Q9BV20 369 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 CCDC32Q9BV29 185 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 IFT27Q9BW83 186 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 GSX2Q9BZM3 304 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 COPS7BQ9H9Q2 264 aaPredicted RBP10.8□□□□□ -0.68
BRCA1-222ENST00000493919 TCF7L1Q9HCS4 588 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 SLCO1B3Q9NPD5 702 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 SPAG4Q9NPE6 437 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 CLEC5AQ9NY25 188 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 KCNK4Q9NYG8 393 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 PIKFYVEQ9Y2I7 2098 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 A0A0A6YYH2 397 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 PRSS51A0A1B0GVH4 220 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 SLC5A10A0PJK1 596 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 A6NJ64 397 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 E7ESA3 106 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 M0R3G1 203 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 WWP2O00308 870 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 AP2A2O94973 939 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 PAX1P15863 534 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 NELFEP18615 380 aaKnown RBP10.8□□□□□ -0.68
BRCA1-222ENST00000493919 MAGP20916 626 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 LSM11P83369 360 aaKnown RBP eCLIP10.8□□□□□ -0.68
BRCA1-222ENST00000493919 RPA4Q13156 261 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 CTBP1Q13363 440 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 MED22Q15528 200 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 ATP6AP1Q15904 470 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 SYTL3Q4VX76 610 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 DHRS13Q6UX07 377 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 FAM83HQ6ZRV2 1179 aaPredicted RBP10.8□□□□□ -0.68
BRCA1-222ENST00000493919 GK5Q6ZS86 529 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 CYS1Q717R9 158 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 HSD17B13Q7Z5P4 300 aaPredicted RBP10.8□□□□□ -0.68
BRCA1-222ENST00000493919 SYVN1Q86TM6 617 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 CILP2Q8IUL8 1156 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 LILRA3Q8N6C8 439 aaPredicted RBP10.8□□□□□ -0.68
BRCA1-222ENST00000493919 FAM156AQ8NDB6 213 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 BEND2Q8NDZ0 799 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 MAPK15Q8TD08 544 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 CHTF18Q8WVB6 975 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 NAT6Q93015 286 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 CCDC74AQ96AQ1 378 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 CERS2Q96G23 380 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 TEAD3Q99594 435 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 UGT2B28Q9BY64 529 aa10.8□□□□□ -0.68
BRCA1-222ENST00000493919 POLDIP3Q9BY77 421 aaKnown RBP10.8□□□□□ -0.68
BRCA1-222ENST00000493919 CLEC4MQ9H2X3 399 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms