RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 REEP3Q6NUK4 255 aa12.64□□□□□ -0.39
CCM2-217ENST00000492883 B3GNT6Q6ZMB0 384 aa12.64□□□□□ -0.39
CCM2-217ENST00000492883 VRK2Q86Y07 508 aa12.64□□□□□ -0.39
CCM2-217ENST00000492883 TREML1Q86YW5 311 aa12.64□□□□□ -0.39
CCM2-217ENST00000492883 ULK2Q8IYT8 1036 aa12.64□□□□□ -0.39
CCM2-217ENST00000492883 UBQLNLQ8IYU4 475 aa12.64□□□□□ -0.39
CCM2-217ENST00000492883 OR10A6Q8NH74 314 aa12.64□□□□□ -0.39
CCM2-217ENST00000492883 GPR119Q8TDV5 335 aa12.64□□□□□ -0.39
CCM2-217ENST00000492883 SMPDL3BQ92485 455 aa12.64□□□□□ -0.39
CCM2-217ENST00000492883 CNOT9Q92600 299 aaKnown RBP12.64□□□□□ -0.39
CCM2-217ENST00000492883 RCN3Q96D15 328 aa12.64□□□□□ -0.39
CCM2-217ENST00000492883 ARSGQ96EG1 525 aa12.64□□□□□ -0.39
CCM2-217ENST00000492883 CCDC120Q96HB5 630 aa12.64□□□□□ -0.39
CCM2-217ENST00000492883 LRRC37BQ96QE4 947 aa12.64□□□□□ -0.39
CCM2-217ENST00000492883 KLHDC3Q9BQ90 382 aa12.64□□□□□ -0.39
CCM2-217ENST00000492883 ECSITQ9BQ95 431 aa12.64□□□□□ -0.39
CCM2-217ENST00000492883 PRDM14Q9GZV8 571 aa12.64□□□□□ -0.39
CCM2-217ENST00000492883 ARMC7Q9H6L4 198 aa12.64□□□□□ -0.39
CCM2-217ENST00000492883 KAT8Q9H7Z6 458 aaKnown RBP12.64□□□□□ -0.39
CCM2-217ENST00000492883 EFCAB1Q9HAE3 211 aa12.64□□□□□ -0.39
CCM2-217ENST00000492883 IFT52Q9Y366 437 aa12.64□□□□□ -0.39
CCM2-217ENST00000492883 SHANK1Q9Y566 2161 aa12.64□□□□□ -0.39
CCM2-217ENST00000492883 DSPPQ9NZW4 1301 aa12.63□□□□□ -0.39
CCM2-217ENST00000492883 DCTN3O75935 186 aa12.63□□□□□ -0.39
CCM2-217ENST00000492883 FAM107AO95990 144 aa12.63□□□□□ -0.39
CCM2-217ENST00000492883 LDLRP01130 860 aa12.63□□□□□ -0.39
CCM2-217ENST00000492883 LINGO3P0C6S8 592 aa12.63□□□□□ -0.39
CCM2-217ENST00000492883 ETS2P15036 469 aa12.63□□□□□ -0.39
CCM2-217ENST00000492883 ZNF17P17021 662 aa12.63□□□□□ -0.39
CCM2-217ENST00000492883 PGCP20142 388 aa12.63□□□□□ -0.39
CCM2-217ENST00000492883 RPS4Y1P22090 263 aaKnown RBP12.63□□□□□ -0.39
CCM2-217ENST00000492883 EIF1P41567 113 aaKnown RBP12.63□□□□□ -0.39
CCM2-217ENST00000492883 LHX2P50458 406 aa12.63□□□□□ -0.39
CCM2-217ENST00000492883 RBBP4Q09028 425 aa12.63□□□□□ -0.39
CCM2-217ENST00000492883 QPRTQ15274 297 aa12.63□□□□□ -0.39
CCM2-217ENST00000492883 TOMM34Q15785 309 aaPredicted RBP12.63□□□□□ -0.39
CCM2-217ENST00000492883 ADRM1Q16186 407 aa12.63□□□□□ -0.39
CCM2-217ENST00000492883 BCL2A1Q16548 175 aa12.63□□□□□ -0.39
CCM2-217ENST00000492883 TMEM44Q2T9K0 475 aa12.63□□□□□ -0.39
CCM2-217ENST00000492883 RABL3Q5HYI8 236 aa12.63□□□□□ -0.39
CCM2-217ENST00000492883 ZNF311Q5JNZ3 666 aa12.63□□□□□ -0.39
CCM2-217ENST00000492883 MRPL2Q5T653 305 aaKnown RBP12.63□□□□□ -0.39
CCM2-217ENST00000492883 NCCRP1Q6ZVX7 275 aaPredicted RBP12.63□□□□□ -0.39
CCM2-217ENST00000492883 CHMP1BQ7LBR1 199 aa12.63□□□□□ -0.39
CCM2-217ENST00000492883 KRT73Q86Y46 540 aa12.63□□□□□ -0.39
CCM2-217ENST00000492883 GTPBP8Q8N3Z3 284 aaPredicted RBP12.63□□□□□ -0.39
CCM2-217ENST00000492883 RPRMLQ8N4K4 120 aa12.63□□□□□ -0.39
CCM2-217ENST00000492883 MEIOBQ8N635 442 aa12.63□□□□□ -0.39
CCM2-217ENST00000492883 C11orf65Q8NCR3 313 aa12.63□□□□□ -0.39
CCM2-217ENST00000492883 HIPK4Q8NE63 616 aa12.63□□□□□ -0.39
CCM2-217ENST00000492883 OR8J3Q8NGG0 315 aa12.63□□□□□ -0.39
CCM2-217ENST00000492883 OR10Q1Q8NGQ4 319 aa12.63□□□□□ -0.39
CCM2-217ENST00000492883 FBXO27Q8NI29 283 aa12.63□□□□□ -0.39
CCM2-217ENST00000492883 ZNF563Q8TA94 476 aa12.63□□□□□ -0.39
CCM2-217ENST00000492883 PHF10Q8WUB8 498 aaKnown RBP12.63□□□□□ -0.39
CCM2-217ENST00000492883 TMEM234Q8WY98 164 aa12.63□□□□□ -0.39
CCM2-217ENST00000492883 RNF145Q96MT1 663 aa12.63□□□□□ -0.39
CCM2-217ENST00000492883 TRIB1Q96RU8 372 aa12.63□□□□□ -0.39
CCM2-217ENST00000492883 DMRTA2Q96SC8 542 aa12.63□□□□□ -0.39
CCM2-217ENST00000492883 PIF1Q9H611 641 aa12.63□□□□□ -0.39
CCM2-217ENST00000492883 RLIMQ9NVW2 624 aa12.63□□□□□ -0.39
CCM2-217ENST00000492883 ANGPT4Q9Y264 503 aa12.63□□□□□ -0.39
CCM2-217ENST00000492883 ZNF443Q9Y2A4 671 aaPredicted RBP12.63□□□□□ -0.39
CCM2-217ENST00000492883 GPC6Q9Y625 555 aaPredicted RBP12.63□□□□□ -0.39
CCM2-217ENST00000492883 AP4B1Q9Y6B7 739 aa12.63□□□□□ -0.39
CCM2-217ENST00000492883 CFAP46Q8IYW2 2715 aa12.63□□□□□ -0.39
CCM2-217ENST00000492883 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.62□□□□□ -0.39
CCM2-217ENST00000492883 C7orf72A4D263 438 aa12.62□□□□□ -0.39
CCM2-217ENST00000492883 WIPF3A6NGB9 483 aa12.62□□□□□ -0.39
CCM2-217ENST00000492883 FXYD1O00168 92 aa12.62□□□□□ -0.39
CCM2-217ENST00000492883 SEC14L5O43304 696 aa12.62□□□□□ -0.39
CCM2-217ENST00000492883 BCAS1O75363 584 aaPredicted RBP12.62□□□□□ -0.39
CCM2-217ENST00000492883 SERPINB7O75635 380 aa12.62□□□□□ -0.39
CCM2-217ENST00000492883 THBS1P07996 1170 aa12.62□□□□□ -0.39
CCM2-217ENST00000492883 ZNF708P17019 499 aa12.62□□□□□ -0.39
CCM2-217ENST00000492883 ADH6P28332 368 aa12.62□□□□□ -0.39
CCM2-217ENST00000492883 AQP1P29972 269 aa12.62□□□□□ -0.39
CCM2-217ENST00000492883 PRDX6P30041 224 aa12.62□□□□□ -0.39
CCM2-217ENST00000492883 SLC6A8P48029 635 aa12.62□□□□□ -0.39
CCM2-217ENST00000492883 CLDN18P56856 261 aa12.62□□□□□ -0.39
CCM2-217ENST00000492883 EEFSECP57772 596 aaKnown RBP12.62□□□□□ -0.39
CCM2-217ENST00000492883 FOXF1Q12946 379 aa12.62□□□□□ -0.39
CCM2-217ENST00000492883 ZSWIM7Q19AV6 140 aa12.62□□□□□ -0.39
CCM2-217ENST00000492883 RTL6Q6ICC9 239 aa12.62□□□□□ -0.39
CCM2-217ENST00000492883 RPTNQ6XPR3 784 aa12.62□□□□□ -0.39
CCM2-217ENST00000492883 ZNF836Q6ZNA1 936 aa12.62□□□□□ -0.39
CCM2-217ENST00000492883 MRGPRGQ86SM5 289 aa12.62□□□□□ -0.39
CCM2-217ENST00000492883 SERPINA11Q86U17 422 aa12.62□□□□□ -0.39
CCM2-217ENST00000492883 CCDC197Q8NCU1 140 aa12.62□□□□□ -0.39
CCM2-217ENST00000492883 FAM71CQ8NEG0 241 aa12.62□□□□□ -0.39
CCM2-217ENST00000492883 POC1BQ8TC44 478 aa12.62□□□□□ -0.39
CCM2-217ENST00000492883 ZPLD1Q8TCW7 415 aa12.62□□□□□ -0.39
CCM2-217ENST00000492883 RND1Q92730 232 aa12.62□□□□□ -0.39
CCM2-217ENST00000492883 MRGPRX4Q96LA9 322 aa12.62□□□□□ -0.39
CCM2-217ENST00000492883 ZNF607Q96SK3 696 aa12.62□□□□□ -0.39
CCM2-217ENST00000492883 NPAS1Q99742 590 aa12.62□□□□□ -0.39
CCM2-217ENST00000492883 TTYH2Q9BSA4 534 aa12.62□□□□□ -0.39
CCM2-217ENST00000492883 SPATA5L1Q9BVQ7 753 aa12.62□□□□□ -0.39
CCM2-217ENST00000492883 EXOSC3Q9NQT5 275 aaKnown RBP12.62□□□□□ -0.39
CCM2-217ENST00000492883 COQ3Q9NZJ6 369 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms