RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 DUSP26Q9BV47 211 aa7.83□□□□□ -1.16
NUP50-217ENST00000491860 TMEM109Q9BVC6 243 aa7.83□□□□□ -1.16
NUP50-217ENST00000491860 GSX2Q9BZM3 304 aa7.83□□□□□ -1.16
NUP50-217ENST00000491860 NMUR2Q9GZQ4 415 aa7.83□□□□□ -1.16
NUP50-217ENST00000491860 C12orf65Q9H3J6 166 aaKnown RBP7.83□□□□□ -1.16
NUP50-217ENST00000491860 SSU72Q9NP77 194 aaKnown RBP7.83□□□□□ -1.16
NUP50-217ENST00000491860 POLE3Q9NRF9 147 aa7.83□□□□□ -1.16
NUP50-217ENST00000491860 SERINC1Q9NRX5 453 aa7.83□□□□□ -1.16
NUP50-217ENST00000491860 SIRT3Q9NTG7 399 aaPredicted RBP7.83□□□□□ -1.16
NUP50-217ENST00000491860 EXD2Q9NVH0 621 aa7.83□□□□□ -1.16
NUP50-217ENST00000491860 KLHL9Q9P2J3 617 aa7.83□□□□□ -1.16
NUP50-217ENST00000491860 KLHL13Q9P2N7 655 aa7.83□□□□□ -1.16
NUP50-217ENST00000491860 PRDM4Q9UKN5 801 aa7.83□□□□□ -1.16
NUP50-217ENST00000491860 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.83□□□□□ -1.16
NUP50-217ENST00000491860 DTNAQ9Y4J8 743 aa7.83□□□□□ -1.16
NUP50-217ENST00000491860 SPIN1Q9Y657 262 aaPredicted RBP7.83□□□□□ -1.16
NUP50-217ENST00000491860 A0A0J9YW62 118 aa7.82□□□□□ -1.16
NUP50-217ENST00000491860 SHISA8B8ZZ34 492 aa7.82□□□□□ -1.16
NUP50-217ENST00000491860 ETV2O00321 342 aaPredicted RBP7.82□□□□□ -1.16
NUP50-217ENST00000491860 RNASET2O00584 256 aaKnown RBP7.82□□□□□ -1.16
NUP50-217ENST00000491860 ZNF195O14628 629 aa7.82□□□□□ -1.16
NUP50-217ENST00000491860 ANKRD28O15084 1053 aa7.82□□□□□ -1.16
NUP50-217ENST00000491860 TM9SF1O15321 606 aa7.82□□□□□ -1.16
NUP50-217ENST00000491860 ZNF264O43296 627 aa7.82□□□□□ -1.16
NUP50-217ENST00000491860 SPAG7O75391 227 aa7.82□□□□□ -1.16
NUP50-217ENST00000491860 STX11O75558 287 aa7.82□□□□□ -1.16
NUP50-217ENST00000491860 CNOT4O95628 575 aaKnown RBP7.82□□□□□ -1.16
NUP50-217ENST00000491860 C6orf47O95873 294 aa7.82□□□□□ -1.16
NUP50-217ENST00000491860 MYZAPP0CAP1 466 aa7.82□□□□□ -1.16
NUP50-217ENST00000491860 LAMP1P11279 417 aa7.82□□□□□ -1.16
NUP50-217ENST00000491860 UBL4AP11441 157 aa7.82□□□□□ -1.16
NUP50-217ENST00000491860 SLC6A8P48029 635 aa7.82□□□□□ -1.16
NUP50-217ENST00000491860 ANXA11P50995 505 aaKnown RBP7.82□□□□□ -1.16
NUP50-217ENST00000491860 CLNS1AP54105 237 aaKnown RBP7.82□□□□□ -1.16
NUP50-217ENST00000491860 CLDN8P56748 225 aa7.82□□□□□ -1.16
NUP50-217ENST00000491860 RAC3P60763 192 aa7.82□□□□□ -1.16
NUP50-217ENST00000491860 ZNF117Q03924 483 aa7.82□□□□□ -1.16
NUP50-217ENST00000491860 LRRC74AQ0VAA2 488 aa7.82□□□□□ -1.16
NUP50-217ENST00000491860 FOXF1Q12946 379 aa7.82□□□□□ -1.16
NUP50-217ENST00000491860 PTGR1Q14914 329 aa7.82□□□□□ -1.16
NUP50-217ENST00000491860 P2RY6Q15077 328 aa7.82□□□□□ -1.16
NUP50-217ENST00000491860 CD226Q15762 336 aa7.82□□□□□ -1.16
NUP50-217ENST00000491860 SLC25A53Q5H9E4 307 aa7.82□□□□□ -1.16
NUP50-217ENST00000491860 ATAD3BQ5T9A4 648 aa7.82□□□□□ -1.16
NUP50-217ENST00000491860 C3orf33Q6P1S2 294 aa7.82□□□□□ -1.16
NUP50-217ENST00000491860 WDR93Q6P2C0 686 aa7.82□□□□□ -1.16
NUP50-217ENST00000491860 CLEC9AQ6UXN8 241 aa7.82□□□□□ -1.16
NUP50-217ENST00000491860 STAC2Q6ZMT1 411 aa7.82□□□□□ -1.16
NUP50-217ENST00000491860 ZNF704Q6ZNC4 412 aaPredicted RBP7.82□□□□□ -1.16
NUP50-217ENST00000491860 EIF3MQ7L2H7 374 aaKnown RBP7.82□□□□□ -1.16
NUP50-217ENST00000491860 FCRLAQ7L513 359 aa7.82□□□□□ -1.16
NUP50-217ENST00000491860 NUDCD3Q8IVD9 361 aa7.82□□□□□ -1.16
NUP50-217ENST00000491860 RIMKLAQ8IXN7 391 aa7.82□□□□□ -1.16
NUP50-217ENST00000491860 OR5W2Q8NH69 310 aa7.82□□□□□ -1.16
NUP50-217ENST00000491860 ZFP90Q8TF47 636 aa7.82□□□□□ -1.16
NUP50-217ENST00000491860 SLC25A43Q8WUT9 341 aaPredicted RBP7.82□□□□□ -1.16
NUP50-217ENST00000491860 ST8SIA1Q92185 356 aa7.82□□□□□ -1.16
NUP50-217ENST00000491860 HSD17B8Q92506 261 aa7.82□□□□□ -1.16
NUP50-217ENST00000491860 ZC3HAV1LQ96H79 300 aaKnown RBP7.82□□□□□ -1.16
NUP50-217ENST00000491860 MARK4Q96L34 752 aa7.82□□□□□ -1.16
NUP50-217ENST00000491860 C1orf50Q9BV19 199 aa7.82□□□□□ -1.16
NUP50-217ENST00000491860 MECRQ9BV79 373 aa7.82□□□□□ -1.16
NUP50-217ENST00000491860 ACTR6Q9GZN1 396 aa7.82□□□□□ -1.16
NUP50-217ENST00000491860 CXorf36Q9H7Y0 433 aa7.82□□□□□ -1.16
NUP50-217ENST00000491860 ZNF395Q9H8N7 513 aaPredicted RBP7.82□□□□□ -1.16
NUP50-217ENST00000491860 GPATCH2Q9NW75 528 aa7.82□□□□□ -1.16
NUP50-217ENST00000491860 SLC17A7Q9P2U7 560 aa7.82□□□□□ -1.16
NUP50-217ENST00000491860 ZDHHC2Q9UIJ5 367 aa7.82□□□□□ -1.16
NUP50-217ENST00000491860 ICAM5Q9UMF0 924 aa7.82□□□□□ -1.16
NUP50-217ENST00000491860 SLC35A3Q9Y2D2 325 aa7.82□□□□□ -1.16
NUP50-217ENST00000491860 CARD8Q9Y2G2 431 aa7.82□□□□□ -1.16
NUP50-217ENST00000491860 RAI1Q7Z5J4 1906 aaPredicted RBP7.82□□□□□ -1.16
NUP50-217ENST00000491860 HEATR5AQ86XA9 2040 aa7.81□□□□□ -1.16
NUP50-217ENST00000491860 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.81□□□□□ -1.16
NUP50-217ENST00000491860 A0A1W2PPR1 153 aa7.81□□□□□ -1.16
NUP50-217ENST00000491860 TMEM233B4DJY2 109 aa7.81□□□□□ -1.16
NUP50-217ENST00000491860 NPIPB9F8W1W9 429 aa7.81□□□□□ -1.16
NUP50-217ENST00000491860 RGS16O15492 202 aaPredicted RBP7.81□□□□□ -1.16
NUP50-217ENST00000491860 SIAH2O43255 324 aa7.81□□□□□ -1.16
NUP50-217ENST00000491860 TYROBPO43914 113 aa7.81□□□□□ -1.16
NUP50-217ENST00000491860 SKAP2O75563 359 aaPredicted RBP7.81□□□□□ -1.16
NUP50-217ENST00000491860 SERPINE1P05121 402 aa7.81□□□□□ -1.16
NUP50-217ENST00000491860 HEXAP06865 529 aa7.81□□□□□ -1.16
NUP50-217ENST00000491860 YES1P07947 543 aa7.81□□□□□ -1.16
NUP50-217ENST00000491860 PRKCAP17252 672 aa7.81□□□□□ -1.16
NUP50-217ENST00000491860 PGCP20142 388 aa7.81□□□□□ -1.16
NUP50-217ENST00000491860 MATN1P21941 496 aa7.81□□□□□ -1.16
NUP50-217ENST00000491860 IL32P24001 234 aa7.81□□□□□ -1.16
NUP50-217ENST00000491860 SFTPDP35247 375 aa7.81□□□□□ -1.16
NUP50-217ENST00000491860 SOAT1P35610 550 aa7.81□□□□□ -1.16
NUP50-217ENST00000491860 VSNL1P62760 191 aa7.81□□□□□ -1.16
NUP50-217ENST00000491860 CSNK2A1P68400 391 aaPredicted RBP7.81□□□□□ -1.16
NUP50-217ENST00000491860 ZNF141Q15928 474 aa7.81□□□□□ -1.16
NUP50-217ENST00000491860 ETFDHQ16134 617 aa7.81□□□□□ -1.16
NUP50-217ENST00000491860 ARHGAP11BQ3KRB8 267 aa7.81□□□□□ -1.16
NUP50-217ENST00000491860 TMEM176BQ3YBM2 270 aaPredicted RBP7.81□□□□□ -1.16
NUP50-217ENST00000491860 CCNJQ5T5M9 372 aa7.81□□□□□ -1.16
NUP50-217ENST00000491860 ADAM5Q6NVV9 412 aa7.81□□□□□ -1.16
NUP50-217ENST00000491860 ZCCHC23Q6ZST2 131 aa7.81□□□□□ -1.16
NUP50-217ENST00000491860 ZNF550Q7Z398 422 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms