RNA–Protein interactions for RNA: ENST00000491791.1

USP4-214, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 821 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-214ENST00000491791 GPLD1P80108 840 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 ZNF45Q02386 682 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 RPL6Q02878 288 aaKnown RBP9.92□□□□□ -0.82
USP4-214ENST00000491791 STX4Q12846 297 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 ZNF155Q12901 538 aaPredicted RBP9.92□□□□□ -0.82
USP4-214ENST00000491791 GPR50Q13585 617 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 DOC2BQ14184 412 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 MED22Q15528 200 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 TSTQ16762 297 aaKnown RBP9.92□□□□□ -0.82
USP4-214ENST00000491791 AMZ1Q400G9 498 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 ANKDD1AQ495B1 522 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 FLYWCH1Q4VC44 716 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 CCNJQ5T5M9 372 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 C16orf87Q6PH81 154 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 CD200R1LQ6Q8B3 271 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 NPSR1Q6W5P4 371 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 DCDC5Q6ZRR9 648 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 PRSS42Q7Z5A4 293 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 HMGN2P46Q86SG4 172 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 GID4Q8IVV7 300 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 PHC2Q8IXK0 858 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 ZNF440Q8IYI8 595 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 CDK20Q8IZL9 346 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 SHISA5Q8N114 240 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 SLC34A3Q8N130 599 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 D2HGDHQ8N465 521 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 ZSCAN1Q8NBB4 408 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 FAM71CQ8NEG0 241 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 TMEM255BQ8WV15 326 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 HSPBAP1Q96EW2 488 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 SPACA7Q96KW9 195 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 DGAT2Q96PD7 388 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 COQ7Q99807 217 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 ZNF649Q9BS31 505 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 CENPOQ9BU64 300 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 MED18Q9BUE0 208 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 OR51E2Q9H255 320 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 UBQLN3Q9H347 655 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 Q9N2J8 555 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 LANCL2Q9NS86 450 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 DNAJB12Q9NXW2 375 aaKnown RBP9.92□□□□□ -0.82
USP4-214ENST00000491791 TAS2R16Q9NYV7 291 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 CNIH4Q9P003 139 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 PRODH2Q9UF12 536 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 CLEC2DQ9UHP7 191 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 ICAM5Q9UMF0 924 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 STUB1Q9UNE7 303 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 DOLKQ9UPQ8 538 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 NTNG1Q9Y2I2 539 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 PEX16Q9Y5Y5 336 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 SDK1Q7Z5N4 2213 aa9.92□□□□□ -0.82
USP4-214ENST00000491791 IGHV1OR21-1A0A087WYE8 117 aa9.91□□□□□ -0.82
USP4-214ENST00000491791 IGKV3D-11A0A0A0MRZ8 115 aa9.91□□□□□ -0.82
USP4-214ENST00000491791 ISPDA4D126 451 aa9.91□□□□□ -0.82
USP4-214ENST00000491791 SLC35F4A4IF30 521 aa9.91□□□□□ -0.82
USP4-214ENST00000491791 ZNF670-ZNF695F2Z2N8 137 aa9.91□□□□□ -0.82
USP4-214ENST00000491791 KPNA4O00629 521 aaPredicted RBP9.91□□□□□ -0.82
USP4-214ENST00000491791 CDC42EP2O14613 210 aa9.91□□□□□ -0.82
USP4-214ENST00000491791 MYL12BO14950 172 aa9.91□□□□□ -0.82
USP4-214ENST00000491791 TOX3O15405 576 aaPredicted RBP9.91□□□□□ -0.82
USP4-214ENST00000491791 IGKV1D-16P01601 117 aa9.91□□□□□ -0.82
USP4-214ENST00000491791 ZGLP1P0C6A0 271 aa9.91□□□□□ -0.82
USP4-214ENST00000491791 LIMS3P0CW19 117 aa9.91□□□□□ -0.82
USP4-214ENST00000491791 LIMS4P0CW20 117 aa9.91□□□□□ -0.82
USP4-214ENST00000491791 PNLIPP16233 465 aa9.91□□□□□ -0.82
USP4-214ENST00000491791 MYL12AP19105 171 aa9.91□□□□□ -0.82
USP4-214ENST00000491791 CD1CP29017 333 aa9.91□□□□□ -0.82
USP4-214ENST00000491791 FGF9P31371 208 aaPredicted RBP9.91□□□□□ -0.82
USP4-214ENST00000491791 MLLT3P42568 568 aaPredicted RBP9.91□□□□□ -0.82
USP4-214ENST00000491791 CAPZA2P47755 286 aa9.91□□□□□ -0.82
USP4-214ENST00000491791 FXYD6P3P58550 94 aa9.91□□□□□ -0.82
USP4-214ENST00000491791 LSM3P62310 102 aaKnown RBP9.91□□□□□ -0.82
USP4-214ENST00000491791 PSPHP78330 225 aa9.91□□□□□ -0.82
USP4-214ENST00000491791 BDH1Q02338 343 aa9.91□□□□□ -0.82
USP4-214ENST00000491791 SLC13A2Q13183 592 aa9.91□□□□□ -0.82
USP4-214ENST00000491791 OXA1LQ15070 435 aa9.91□□□□□ -0.82
USP4-214ENST00000491791 ISXQ2M1V0 245 aa9.91□□□□□ -0.82
USP4-214ENST00000491791 RGS21Q2M5E4 152 aa9.91□□□□□ -0.82
USP4-214ENST00000491791 DEFB110Q30KQ9 67 aa9.91□□□□□ -0.82
USP4-214ENST00000491791 PLK5Q496M5 336 aa9.91□□□□□ -0.82
USP4-214ENST00000491791 WDR45BQ5MNZ6 344 aa9.91□□□□□ -0.82
USP4-214ENST00000491791 ULK3Q6PHR2 472 aa9.91□□□□□ -0.82
USP4-214ENST00000491791 FIGNL1Q6PIW4 674 aa9.91□□□□□ -0.82
USP4-214ENST00000491791 WDR74Q6RFH5 385 aaPredicted RBP9.91□□□□□ -0.82
USP4-214ENST00000491791 WDR88Q6ZMY6 472 aa9.91□□□□□ -0.82
USP4-214ENST00000491791 QSOX2Q6ZRP7 698 aa9.91□□□□□ -0.82
USP4-214ENST00000491791 NUP54Q7Z3B4 507 aa9.91□□□□□ -0.82
USP4-214ENST00000491791 ZAR1Q86SH2 424 aa9.91□□□□□ -0.82
USP4-214ENST00000491791 SLITRK4Q8IW52 837 aa9.91□□□□□ -0.82
USP4-214ENST00000491791 TMCO5AQ8N6Q1 288 aa9.91□□□□□ -0.82
USP4-214ENST00000491791 RCBTB1Q8NDN9 531 aa9.91□□□□□ -0.82
USP4-214ENST00000491791 PSD4Q8NDX1 1056 aa9.91□□□□□ -0.82
USP4-214ENST00000491791 OR9Q1Q8NGQ5 310 aa9.91□□□□□ -0.82
USP4-214ENST00000491791 OR52N1Q8NH53 320 aa9.91□□□□□ -0.82
USP4-214ENST00000491791 OR51Q1Q8NH59 317 aa9.91□□□□□ -0.82
USP4-214ENST00000491791 SLC2A12Q8TD20 617 aa9.91□□□□□ -0.82
USP4-214ENST00000491791 CNOT9Q92600 299 aaKnown RBP9.91□□□□□ -0.82
USP4-214ENST00000491791 RNFT2Q96EX2 444 aa9.91□□□□□ -0.82
USP4-214ENST00000491791 PEX11GQ96HA9 241 aa9.91□□□□□ -0.82
USP4-214ENST00000491791 SLC41A2Q96JW4 573 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms