RNA–Protein interactions for RNA: ENST00000491366.5

SEC22A-209, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 482 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-209ENST00000491366 PIGQQ9BRB3 760 aa17.72■□□□□ 0.43
SEC22A-209ENST00000491366 ARL8BQ9NVJ2 186 aa17.72■□□□□ 0.43
SEC22A-209ENST00000491366 SLC5A6Q9Y289 635 aa17.72■□□□□ 0.43
SEC22A-209ENST00000491366 ZNF407Q9C0G0 2248 aa17.72■□□□□ 0.43
SEC22A-209ENST00000491366 ZGRF1Q86YA3 2104 aa17.72■□□□□ 0.43
SEC22A-209ENST00000491366 RP1L1Q8IWN7 2480 aaPredicted RBP17.72■□□□□ 0.43
SEC22A-209ENST00000491366 ESPL1Q14674 2120 aa17.71■□□□□ 0.43
SEC22A-209ENST00000491366 A0A1B0GUH1 482 aa17.71■□□□□ 0.43
SEC22A-209ENST00000491366 OR2M5A3KFT3 312 aa17.71■□□□□ 0.43
SEC22A-209ENST00000491366 H3BML4 177 aa17.71■□□□□ 0.43
SEC22A-209ENST00000491366 AGFG2O95081 481 aa17.71■□□□□ 0.43
SEC22A-209ENST00000491366 ESRRAP11474 423 aaPredicted RBP17.71■□□□□ 0.43
SEC22A-209ENST00000491366 RYKP34925 604 aa17.71■□□□□ 0.43
SEC22A-209ENST00000491366 PLAURQ03405 335 aa17.71■□□□□ 0.43
SEC22A-209ENST00000491366 SRYQ05066 204 aa17.71■□□□□ 0.43
SEC22A-209ENST00000491366 RBBP4Q09028 425 aa17.71■□□□□ 0.43
SEC22A-209ENST00000491366 LARS2Q15031 903 aaKnown RBP17.71■□□□□ 0.43
SEC22A-209ENST00000491366 GLYR1Q49A26 553 aaPredicted RBP17.71■□□□□ 0.43
SEC22A-209ENST00000491366 ZNF311Q5JNZ3 666 aa17.71■□□□□ 0.43
SEC22A-209ENST00000491366 ENPP6Q6UWR7 440 aa17.71■□□□□ 0.43
SEC22A-209ENST00000491366 NET1Q7Z628 596 aaPredicted RBP17.71■□□□□ 0.43
SEC22A-209ENST00000491366 KRT73Q86Y46 540 aa17.71■□□□□ 0.43
SEC22A-209ENST00000491366 CMIPQ8IY22 773 aa17.71■□□□□ 0.43
SEC22A-209ENST00000491366 FITM2Q8N6M3 262 aa17.71■□□□□ 0.43
SEC22A-209ENST00000491366 FAM71CQ8NEG0 241 aa17.71■□□□□ 0.43
SEC22A-209ENST00000491366 SMPDL3BQ92485 455 aa17.71■□□□□ 0.43
SEC22A-209ENST00000491366 ZBTB8AQ96BR9 441 aa17.71■□□□□ 0.43
SEC22A-209ENST00000491366 RNF145Q96MT1 663 aa17.71■□□□□ 0.43
SEC22A-209ENST00000491366 TP63Q9H3D4 680 aaPredicted RBP17.71■□□□□ 0.43
SEC22A-209ENST00000491366 RLIMQ9NVW2 624 aa17.71■□□□□ 0.43
SEC22A-209ENST00000491366 DNAJB12Q9NXW2 375 aaKnown RBP17.71■□□□□ 0.43
SEC22A-209ENST00000491366 TAGLN3Q9UI15 199 aa17.71■□□□□ 0.43
SEC22A-209ENST00000491366 ERRFI1Q9UJM3 462 aaPredicted RBP17.71■□□□□ 0.43
SEC22A-209ENST00000491366 ZNF232Q9UNY5 417 aa17.71■□□□□ 0.43
SEC22A-209ENST00000491366 UBR5O95071 2799 aaPredicted RBP17.71■□□□□ 0.43
SEC22A-209ENST00000491366 CCT8L1PA6NM43 557 aa17.7■□□□□ 0.42
SEC22A-209ENST00000491366 FIGNL2A6NMB9 653 aa17.7■□□□□ 0.42
SEC22A-209ENST00000491366 THBS1P07996 1170 aa17.7■□□□□ 0.42
SEC22A-209ENST00000491366 LINGO3P0C6S8 592 aa17.7■□□□□ 0.42
SEC22A-209ENST00000491366 PABPC4LP0CB38 370 aaKnown RBP17.7■□□□□ 0.42
SEC22A-209ENST00000491366 ETS2P15036 469 aa17.7■□□□□ 0.42
SEC22A-209ENST00000491366 POU3F2P20265 443 aaPredicted RBP17.7■□□□□ 0.42
SEC22A-209ENST00000491366 CHMP24386 653 aa17.7■□□□□ 0.42
SEC22A-209ENST00000491366 GZMMP51124 257 aa17.7■□□□□ 0.42
SEC22A-209ENST00000491366 EEF1A1P68104 462 aaKnown RBP17.7■□□□□ 0.42
SEC22A-209ENST00000491366 FOXF1Q12946 379 aa17.7■□□□□ 0.42
SEC22A-209ENST00000491366 QPRTQ15274 297 aa17.7■□□□□ 0.42
SEC22A-209ENST00000491366 NCCRP1Q6ZVX7 275 aaPredicted RBP17.7■□□□□ 0.42
SEC22A-209ENST00000491366 ARPINQ7Z6K5 226 aa17.7■□□□□ 0.42
SEC22A-209ENST00000491366 UBQLNLQ8IYU4 475 aa17.7■□□□□ 0.42
SEC22A-209ENST00000491366 RELTQ969Z4 430 aa17.7■□□□□ 0.42
SEC22A-209ENST00000491366 WDYHV1Q96HA8 205 aa17.7■□□□□ 0.42
SEC22A-209ENST00000491366 ZNF607Q96SK3 696 aa17.7■□□□□ 0.42
SEC22A-209ENST00000491366 GPATCH1Q9BRR8 931 aaKnown RBP17.7■□□□□ 0.42
SEC22A-209ENST00000491366 CMTM6Q9NX76 183 aa17.7■□□□□ 0.42
SEC22A-209ENST00000491366 USP22Q9UPT9 525 aa17.7■□□□□ 0.42
SEC22A-209ENST00000491366 IFT52Q9Y366 437 aa17.7■□□□□ 0.42
SEC22A-209ENST00000491366 ZNF337Q9Y3M9 751 aa17.7■□□□□ 0.42
SEC22A-209ENST00000491366 H0Y3Z8 333 aa17.69■□□□□ 0.42
SEC22A-209ENST00000491366 ZNF17P17021 662 aa17.69■□□□□ 0.42
SEC22A-209ENST00000491366 PGCP20142 388 aa17.69■□□□□ 0.42
SEC22A-209ENST00000491366 ACVR2AP27037 513 aa17.69■□□□□ 0.42
SEC22A-209ENST00000491366 PCGF2P35227 344 aa17.69■□□□□ 0.42
SEC22A-209ENST00000491366 LHX2P50458 406 aa17.69■□□□□ 0.42
SEC22A-209ENST00000491366 SLC7A2P52569 658 aa17.69■□□□□ 0.42
SEC22A-209ENST00000491366 SRSF1Q07955 248 aaKnown RBP eCLIP17.69■□□□□ 0.42
SEC22A-209ENST00000491366 VMACQ2NL98 169 aa17.69■□□□□ 0.42
SEC22A-209ENST00000491366 TMEM44Q2T9K0 475 aa17.69■□□□□ 0.42
SEC22A-209ENST00000491366 FAM91A1Q658Y4 838 aa17.69■□□□□ 0.42
SEC22A-209ENST00000491366 HACD2Q6Y1H2 254 aa17.69■□□□□ 0.42
SEC22A-209ENST00000491366 CALHM3Q86XJ0 350 aa17.69■□□□□ 0.42
SEC22A-209ENST00000491366 PM20D2Q8IYS1 436 aa17.69■□□□□ 0.42
SEC22A-209ENST00000491366 CLIP4Q8N3C7 705 aa17.69■□□□□ 0.42
SEC22A-209ENST00000491366 GTPBP8Q8N3Z3 284 aaPredicted RBP17.69■□□□□ 0.42
SEC22A-209ENST00000491366 RPRMLQ8N4K4 120 aa17.69■□□□□ 0.42
SEC22A-209ENST00000491366 FBXO27Q8NI29 283 aa17.69■□□□□ 0.42
SEC22A-209ENST00000491366 ZNF563Q8TA94 476 aa17.69■□□□□ 0.42
SEC22A-209ENST00000491366 POC1BQ8TC44 478 aa17.69■□□□□ 0.42
SEC22A-209ENST00000491366 ZNF524Q96C55 264 aa17.69■□□□□ 0.42
SEC22A-209ENST00000491366 ZNF583Q96ND8 569 aa17.69■□□□□ 0.42
SEC22A-209ENST00000491366 HOPXQ9BPY8 73 aaPredicted RBP17.69■□□□□ 0.42
SEC22A-209ENST00000491366 SPATA5L1Q9BVQ7 753 aa17.69■□□□□ 0.42
SEC22A-209ENST00000491366 SPATA9Q9BWV2 254 aa17.69■□□□□ 0.42
SEC22A-209ENST00000491366 PRDM14Q9GZV8 571 aa17.69■□□□□ 0.42
SEC22A-209ENST00000491366 EXOSC3Q9NQT5 275 aaKnown RBP17.69■□□□□ 0.42
SEC22A-209ENST00000491366 MEMO1Q9Y316 297 aa17.69■□□□□ 0.42
SEC22A-209ENST00000491366 GPC6Q9Y625 555 aaPredicted RBP17.69■□□□□ 0.42
SEC22A-209ENST00000491366 FREM3P0C091 2139 aa17.69■□□□□ 0.42
SEC22A-209ENST00000491366 CDHR4A6H8M9 788 aa17.68■□□□□ 0.42
SEC22A-209ENST00000491366 AP3D1O14617 1153 aa17.68■□□□□ 0.42
SEC22A-209ENST00000491366 SEC14L5O43304 696 aa17.68■□□□□ 0.42
SEC22A-209ENST00000491366 WDR1O75083 606 aa17.68■□□□□ 0.42
SEC22A-209ENST00000491366 GKN3PP0CG01 181 aa17.68■□□□□ 0.42
SEC22A-209ENST00000491366 PRKCAP17252 672 aa17.68■□□□□ 0.42
SEC22A-209ENST00000491366 PSME3P61289 254 aa17.68■□□□□ 0.42
SEC22A-209ENST00000491366 RNF220Q5VTB9 566 aa17.68■□□□□ 0.42
SEC22A-209ENST00000491366 ARMC8Q8IUR7 673 aa17.68■□□□□ 0.42
SEC22A-209ENST00000491366 SLC30A8Q8IWU4 369 aa17.68■□□□□ 0.42
SEC22A-209ENST00000491366 SLC15A3Q8IY34 581 aa17.68■□□□□ 0.42
SEC22A-209ENST00000491366 ULK2Q8IYT8 1036 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms