RNA–Protein interactions for RNA: ENST00000490839.1

AGAP3-222, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, human

TSL 4

Gene AGAP3, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AGAP3-222	ENST00000490839	TSPYL1	Q9H0U9	437 aa		13.5	□□□□□ -0.25
AGAP3-222	ENST00000490839	MID1IP1	Q9NPA3	183 aa		13.5	□□□□□ -0.25
AGAP3-222	ENST00000490839	CBLN4	Q9NTU7	201 aa		13.5	□□□□□ -0.25
AGAP3-222	ENST00000490839	NPAP1	Q9NZP6	1156 aa		13.5	□□□□□ -0.25
AGAP3-222	ENST00000490839	TMEM216	Q9P0N5	145 aa		13.5	□□□□□ -0.25
AGAP3-222	ENST00000490839	NTM	Q9P121	344 aa		13.5	□□□□□ -0.25
AGAP3-222	ENST00000490839	EFNA2	O43921	213 aa		13.49	□□□□□ -0.25
AGAP3-222	ENST00000490839	ZNF16	P17020	682 aa	Predicted RBP	13.49	□□□□□ -0.25
AGAP3-222	ENST00000490839	COX5A	P20674	150 aa		13.49	□□□□□ -0.25
AGAP3-222	ENST00000490839	PTN	P21246	168 aa		13.49	□□□□□ -0.25
AGAP3-222	ENST00000490839	ENPP1	P22413	925 aa		13.49	□□□□□ -0.25
AGAP3-222	ENST00000490839	TTK	P33981	857 aa		13.49	□□□□□ -0.25
AGAP3-222	ENST00000490839	PRKAG1	P54619	331 aa		13.49	□□□□□ -0.25
AGAP3-222	ENST00000490839	FOXA1	P55317	472 aa		13.49	□□□□□ -0.25
AGAP3-222	ENST00000490839	SUMO3	P55854	103 aa	Predicted RBP	13.49	□□□□□ -0.25
AGAP3-222	ENST00000490839	ZNF117	Q03924	483 aa		13.49	□□□□□ -0.25
AGAP3-222	ENST00000490839	TMEM176B	Q3YBM2	270 aa	Predicted RBP	13.49	□□□□□ -0.25
AGAP3-222	ENST00000490839	C8orf74	Q6P047	294 aa		13.49	□□□□□ -0.25
AGAP3-222	ENST00000490839		Q6ZSR9	355 aa		13.49	□□□□□ -0.25
AGAP3-222	ENST00000490839	ZNF572	Q7Z3I7	529 aa	Predicted RBP	13.49	□□□□□ -0.25
AGAP3-222	ENST00000490839	SZRD1	Q7Z422	152 aa		13.49	□□□□□ -0.25
AGAP3-222	ENST00000490839	TRIM46	Q7Z4K8	759 aa		13.49	□□□□□ -0.25
AGAP3-222	ENST00000490839	MTERF4	Q7Z6M4	381 aa	Known RBP	13.49	□□□□□ -0.25
AGAP3-222	ENST00000490839	COX18	Q8N8Q8	333 aa		13.49	□□□□□ -0.25
AGAP3-222	ENST00000490839	SLC16A11	Q8NCK7	471 aa		13.49	□□□□□ -0.25
AGAP3-222	ENST00000490839	FBXO27	Q8NI29	283 aa		13.49	□□□□□ -0.25
AGAP3-222	ENST00000490839	METTL2A	Q96IZ6	378 aa	Known RBP	13.49	□□□□□ -0.25
AGAP3-222	ENST00000490839	PSD2	Q9BQI7	771 aa		13.49	□□□□□ -0.25
AGAP3-222	ENST00000490839	GSTO2	Q9H4Y5	243 aa		13.49	□□□□□ -0.25
AGAP3-222	ENST00000490839	CXorf36	Q9H7Y0	433 aa		13.49	□□□□□ -0.25
AGAP3-222	ENST00000490839	ING1	Q9UK53	422 aa	Predicted RBP	13.49	□□□□□ -0.25
AGAP3-222	ENST00000490839	MGAT4B	Q9UQ53	548 aa		13.49	□□□□□ -0.25
AGAP3-222	ENST00000490839	ACTL7B	Q9Y614	415 aa		13.49	□□□□□ -0.25
AGAP3-222	ENST00000490839	GPC6	Q9Y625	555 aa	Predicted RBP	13.49	□□□□□ -0.25
AGAP3-222	ENST00000490839	ALOX5	P09917	674 aa		13.48	□□□□□ -0.25
AGAP3-222	ENST00000490839	CSF3	P09919	207 aa		13.48	□□□□□ -0.25
AGAP3-222	ENST00000490839	GGT1	P19440	569 aa		13.48	□□□□□ -0.25
AGAP3-222	ENST00000490839	SLC7A1	P30825	629 aa		13.48	□□□□□ -0.25
AGAP3-222	ENST00000490839	RAC3	P60763	192 aa		13.48	□□□□□ -0.25
AGAP3-222	ENST00000490839	SELENBP1	Q13228	472 aa		13.48	□□□□□ -0.25
AGAP3-222	ENST00000490839	RAB35	Q15286	201 aa		13.48	□□□□□ -0.25
AGAP3-222	ENST00000490839	CYB5R2	Q6BCY4	276 aa		13.48	□□□□□ -0.25
AGAP3-222	ENST00000490839	ZCCHC12	Q6PEW1	402 aa		13.48	□□□□□ -0.25
AGAP3-222	ENST00000490839	TIFAB	Q6ZNK6	161 aa		13.48	□□□□□ -0.25
AGAP3-222	ENST00000490839	ZNF525	Q8N782	197 aa		13.48	□□□□□ -0.25
AGAP3-222	ENST00000490839	FAM168A	Q92567	244 aa		13.48	□□□□□ -0.25
AGAP3-222	ENST00000490839	CIDEC	Q96AQ7	238 aa	Predicted RBP	13.48	□□□□□ -0.25
AGAP3-222	ENST00000490839	EGLN2	Q96KS0	407 aa		13.48	□□□□□ -0.25
AGAP3-222	ENST00000490839	DHRS9	Q9BPW9	319 aa		13.48	□□□□□ -0.25
AGAP3-222	ENST00000490839	MANSC1	Q9H8J5	431 aa		13.48	□□□□□ -0.25
AGAP3-222	ENST00000490839	RRAGD	Q9NQL2	400 aa	Predicted RBP	13.48	□□□□□ -0.25
AGAP3-222	ENST00000490839	PRSS50	Q9UI38	385 aa		13.48	□□□□□ -0.25
AGAP3-222	ENST00000490839	PYCARD	Q9ULZ3	195 aa		13.48	□□□□□ -0.25
AGAP3-222	ENST00000490839	ICAM5	Q9UMF0	924 aa		13.48	□□□□□ -0.25
AGAP3-222	ENST00000490839	IGHV3-15	A0A0B4J1V0	119 aa		13.47	□□□□□ -0.25
AGAP3-222	ENST00000490839	OR5H1	A6NKK0	313 aa		13.47	□□□□□ -0.25
AGAP3-222	ENST00000490839		E7EQL1	145 aa		13.47	□□□□□ -0.25
AGAP3-222	ENST00000490839		H3BQF6	201 aa		13.47	□□□□□ -0.25
AGAP3-222	ENST00000490839		H7C417	338 aa		13.47	□□□□□ -0.25
AGAP3-222	ENST00000490839	UBFD1	O14562	309 aa	Known RBP	13.47	□□□□□ -0.25
AGAP3-222	ENST00000490839	TBX19	O60806	448 aa		13.47	□□□□□ -0.25
AGAP3-222	ENST00000490839	PGM3	O95394	542 aa		13.47	□□□□□ -0.25
AGAP3-222	ENST00000490839	NUDT14	O95848	222 aa		13.47	□□□□□ -0.25
AGAP3-222	ENST00000490839	IGHV4-31	P0DP07	118 aa		13.47	□□□□□ -0.25
AGAP3-222	ENST00000490839	SRD5A1	P18405	259 aa		13.47	□□□□□ -0.25
AGAP3-222	ENST00000490839	IGHV1-2	P23083	117 aa		13.47	□□□□□ -0.25
AGAP3-222	ENST00000490839	P2RX1	P51575	399 aa		13.47	□□□□□ -0.25
AGAP3-222	ENST00000490839	ARL13A	Q5H913	290 aa	Predicted RBP	13.47	□□□□□ -0.25
AGAP3-222	ENST00000490839	EXOSC6	Q5RKV6	272 aa	Known RBP	13.47	□□□□□ -0.25
AGAP3-222	ENST00000490839	CCNJ	Q5T5M9	372 aa		13.47	□□□□□ -0.25
AGAP3-222	ENST00000490839	ANKRD26P1	Q6NSI1	321 aa		13.47	□□□□□ -0.25
AGAP3-222	ENST00000490839	TMEM108	Q6UXF1	575 aa		13.47	□□□□□ -0.25
AGAP3-222	ENST00000490839	FBXL14	Q8N1E6	418 aa		13.47	□□□□□ -0.25
AGAP3-222	ENST00000490839	PIAS4	Q8N2W9	510 aa	Predicted RBP	13.47	□□□□□ -0.25
AGAP3-222	ENST00000490839	MUC15	Q8N387	334 aa		13.47	□□□□□ -0.25
AGAP3-222	ENST00000490839	ZNF527	Q8NB42	609 aa		13.47	□□□□□ -0.25
AGAP3-222	ENST00000490839	ATP6V1C2	Q8NEY4	427 aa		13.47	□□□□□ -0.25
AGAP3-222	ENST00000490839	OR2W6P	Q8NHA6	318 aa		13.47	□□□□□ -0.25
AGAP3-222	ENST00000490839	PHOSPHO1	Q8TCT1	267 aa		13.47	□□□□□ -0.25
AGAP3-222	ENST00000490839	C10orf105	Q8TEF2	133 aa		13.47	□□□□□ -0.25
AGAP3-222	ENST00000490839	JADE3	Q92613	823 aa		13.47	□□□□□ -0.25
AGAP3-222	ENST00000490839	PROX1	Q92786	737 aa		13.47	□□□□□ -0.25
AGAP3-222	ENST00000490839	MRGPRX4	Q96LA9	322 aa		13.47	□□□□□ -0.25
AGAP3-222	ENST00000490839	BTBD2	Q9BX70	525 aa		13.47	□□□□□ -0.25
AGAP3-222	ENST00000490839	ACSS1	Q9NUB1	689 aa	Predicted RBP	13.47	□□□□□ -0.25
AGAP3-222	ENST00000490839	POU2F3	Q9UKI9	436 aa		13.47	□□□□□ -0.25
AGAP3-222	ENST00000490839		A0A087WUV0	522 aa	Predicted RBP	13.46	□□□□□ -0.25
AGAP3-222	ENST00000490839	ZNF724	A8MTY0	619 aa		13.46	□□□□□ -0.25
AGAP3-222	ENST00000490839		H3BNH8	94 aa		13.46	□□□□□ -0.25
AGAP3-222	ENST00000490839	LMX1B	O60663	402 aa		13.46	□□□□□ -0.25
AGAP3-222	ENST00000490839	CYTIP	O60759	359 aa		13.46	□□□□□ -0.25
AGAP3-222	ENST00000490839	CRCP	O75575	148 aa		13.46	□□□□□ -0.25
AGAP3-222	ENST00000490839	DHRS4L1	P0CG22	281 aa		13.46	□□□□□ -0.25
AGAP3-222	ENST00000490839	PRKCA	P17252	672 aa		13.46	□□□□□ -0.25
AGAP3-222	ENST00000490839	PRPH2	P23942	346 aa		13.46	□□□□□ -0.25
AGAP3-222	ENST00000490839	PTAFR	P25105	342 aa		13.46	□□□□□ -0.25
AGAP3-222	ENST00000490839	CASQ1	P31415	396 aa		13.46	□□□□□ -0.25
AGAP3-222	ENST00000490839	FRK	P42685	505 aa	Predicted RBP	13.46	□□□□□ -0.25
AGAP3-222	ENST00000490839	NAA20	P61599	178 aa		13.46	□□□□□ -0.25
AGAP3-222	ENST00000490839	POU6F2	P78424	691 aa	Predicted RBP	13.46	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms