RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 SPTAN1Q13813 2472 aaKnown RBP14.38□□□□□ -0.11
PCCB-218ENST00000490504 LOC100130705A0A1B0GUX0 176 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 M0R3H8 397 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 FFAR1O14842 300 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 SLC16A6O15403 523 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 FCMRO60667 390 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 PRAMEF2O60811 474 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 MITFO75030 526 aaPredicted RBP14.37□□□□□ -0.11
PCCB-218ENST00000490504 STX11O75558 287 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 EPPINO95925 133 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 IFNA16P05015 189 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 GP1BBP13224 206 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 ANXA8P13928 327 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 EDN3P14138 238 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 PIGAP37287 484 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 SMIM11AP58511 58 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 POU6F2P78424 691 aaPredicted RBP14.37□□□□□ -0.11
PCCB-218ENST00000490504 TUBA3CQ13748 450 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 ZNF267Q14586 743 aaPredicted RBP14.37□□□□□ -0.11
PCCB-218ENST00000490504 MEP1AQ16819 746 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 TUBA3EQ6PEY2 450 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 HMGN2P46Q86SG4 172 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 VRK2Q86Y07 508 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 RBM45Q8IUH3 476 aaKnown RBP14.37□□□□□ -0.11
PCCB-218ENST00000490504 PEX5LQ8IYB4 626 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 C8orf59Q8N0T1 100 aaPredicted RBP14.37□□□□□ -0.11
PCCB-218ENST00000490504 ZNF619Q8N2I2 560 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 OR52P1PQ8NH57 321 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 PIK3R3Q92569 461 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 ARHGDIGQ99819 225 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 POLE3Q9NRF9 147 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 ANKRD10Q9NXR5 420 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 MKLN1Q9UL63 735 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 ZNF443Q9Y2A4 671 aaPredicted RBP14.37□□□□□ -0.11
PCCB-218ENST00000490504 NBPF19A0A087WUL8 3843 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 ARRDC5A6NEK1 342 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 H3BNH8 94 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 UGT2B11O75310 529 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 CCNB2O95067 398 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 H1F0P07305 194 aaKnown RBP14.37□□□□□ -0.11
PCCB-218ENST00000490504 SMIM18P0DKX4 95 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 SSTR4P31391 388 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 GABRA3P34903 492 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 CD96P40200 585 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 EMDP50402 254 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 IL1RL1Q01638 556 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 FUT7Q11130 342 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 IL18R1Q13478 541 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 TTC33Q6PID6 262 aaPredicted RBP14.37□□□□□ -0.11
PCCB-218ENST00000490504 SLC5A8Q8N695 610 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 NFAM1Q8NET5 270 aaPredicted RBP14.37□□□□□ -0.11
PCCB-218ENST00000490504 PMM1Q92871 262 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 ZG16BQ96DA0 208 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 MUS81Q96NY9 551 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 SIGLEC12Q96PQ1 595 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 ALPK1Q96QP1 1244 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 FEVQ99581 238 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 WFDC6Q9BQY6 131 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 CNPPD1Q9BV87 410 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 MRPS26Q9BYN8 205 aaKnown RBP14.37□□□□□ -0.11
PCCB-218ENST00000490504 SAP130Q9H0E3 1048 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 RIBC2Q9H4K1 309 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 CDCP1Q9H5V8 836 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 NMNAT1Q9HAN9 279 aaPredicted RBP14.37□□□□□ -0.11
PCCB-218ENST00000490504 KLHL28Q9NXS3 571 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 ZNF232Q9UNY5 417 aa14.37□□□□□ -0.11
PCCB-218ENST00000490504 A6NHS1 94 aa14.36□□□□□ -0.11
PCCB-218ENST00000490504 SAGE2PA6NJ88 616 aa14.36□□□□□ -0.11
PCCB-218ENST00000490504 TTC36A6NLP5 189 aa14.36□□□□□ -0.11
PCCB-218ENST00000490504 HRKO00198 91 aa14.36□□□□□ -0.11
PCCB-218ENST00000490504 BCKDKO14874 412 aa14.36□□□□□ -0.11
PCCB-218ENST00000490504 KIAA0513O60268 411 aa14.36□□□□□ -0.11
PCCB-218ENST00000490504 UGT2B17O75795 530 aa14.36□□□□□ -0.11
PCCB-218ENST00000490504 SMNDC1O75940 238 aaKnown RBP eCLIP14.36□□□□□ -0.11
PCCB-218ENST00000490504 THBS1P07996 1170 aa14.36□□□□□ -0.11
PCCB-218ENST00000490504 RPS4Y1P22090 263 aaKnown RBP14.36□□□□□ -0.11
PCCB-218ENST00000490504 RPS6KA3P51812 740 aa14.36□□□□□ -0.11
PCCB-218ENST00000490504 TPD52P55327 224 aaPredicted RBP14.36□□□□□ -0.11
PCCB-218ENST00000490504 LARS2Q15031 903 aaKnown RBP14.36□□□□□ -0.11
PCCB-218ENST00000490504 INAQ16352 499 aa14.36□□□□□ -0.11
PCCB-218ENST00000490504 KCTD21Q4G0X4 260 aa14.36□□□□□ -0.11
PCCB-218ENST00000490504 ZNF766Q5HY98 468 aa14.36□□□□□ -0.11
PCCB-218ENST00000490504 CCNJQ5T5M9 372 aa14.36□□□□□ -0.11
PCCB-218ENST00000490504 HIST2H2BCQ6DN03 193 aa14.36□□□□□ -0.11
PCCB-218ENST00000490504 THAP5Q7Z6K1 395 aa14.36□□□□□ -0.11
PCCB-218ENST00000490504 ZNF786Q8N393 782 aa14.36□□□□□ -0.11
PCCB-218ENST00000490504 OR6T1Q8NGN1 323 aa14.36□□□□□ -0.11
PCCB-218ENST00000490504 NR4A3Q92570 626 aa14.36□□□□□ -0.11
PCCB-218ENST00000490504 VSTM2LQ96N03 204 aa14.36□□□□□ -0.11
PCCB-218ENST00000490504 HES7Q9BYE0 225 aa14.36□□□□□ -0.11
PCCB-218ENST00000490504 RHCGQ9UBD6 479 aa14.36□□□□□ -0.11
PCCB-218ENST00000490504 TMCC3Q9ULS5 477 aa14.36□□□□□ -0.11
PCCB-218ENST00000490504 A4GNTQ9UNA3 340 aa14.36□□□□□ -0.11
PCCB-218ENST00000490504 ERVK-19Q9WJR5 959 aa14.36□□□□□ -0.11
PCCB-218ENST00000490504 OSGIN2Q9Y236 505 aa14.36□□□□□ -0.11
PCCB-218ENST00000490504 SLC5A6Q9Y289 635 aa14.36□□□□□ -0.11
PCCB-218ENST00000490504 POLEQ07864 2286 aa14.35□□□□□ -0.11
PCCB-218ENST00000490504 GXYLT2A0PJZ3 443 aa14.35□□□□□ -0.11
PCCB-218ENST00000490504 WIPF3A6NGB9 483 aa14.35□□□□□ -0.11
PCCB-218ENST00000490504 AGAP5A6NIR3 686 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms