RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 AANATQ16613 207 aa2.78□□□□□ -1.96
CD46-216ENST00000490278 TPD52L1Q16890 204 aaPredicted RBP2.78□□□□□ -1.96
CD46-216ENST00000490278 TATDN3Q17R31 274 aa2.78□□□□□ -1.96
CD46-216ENST00000490278 SLC5A12Q1EHB4 618 aa2.78□□□□□ -1.96
CD46-216ENST00000490278 LRRC36Q1X8D7 754 aa2.78□□□□□ -1.96
CD46-216ENST00000490278 BLOC1S2Q6QNY1 142 aa2.78□□□□□ -1.96
CD46-216ENST00000490278 GET4Q7L5D6 327 aaPredicted RBP2.78□□□□□ -1.96
CD46-216ENST00000490278 C16orf62Q7Z3J2 963 aa2.78□□□□□ -1.96
CD46-216ENST00000490278 KIAA1328Q86T90 577 aa2.78□□□□□ -1.96
CD46-216ENST00000490278 TMEM110Q86TL2 294 aa2.78□□□□□ -1.96
CD46-216ENST00000490278 PPP1R27Q86WC6 154 aa2.78□□□□□ -1.96
CD46-216ENST00000490278 C17orf82Q86X59 251 aaPredicted RBP2.78□□□□□ -1.96
CD46-216ENST00000490278 DENND6BQ8NEG7 585 aa2.78□□□□□ -1.96
CD46-216ENST00000490278 OR10H4Q8NGA5 316 aa2.78□□□□□ -1.96
CD46-216ENST00000490278 ANKRD49Q8WVL7 239 aa2.78□□□□□ -1.96
CD46-216ENST00000490278 SPRYD4Q8WW59 207 aaPredicted RBP2.78□□□□□ -1.96
CD46-216ENST00000490278 SYAP1Q96A49 352 aaPredicted RBP2.78□□□□□ -1.96
CD46-216ENST00000490278 C16orf74Q96GX8 76 aa2.78□□□□□ -1.96
CD46-216ENST00000490278 IL4I1Q96RQ9 567 aa2.78□□□□□ -1.96
CD46-216ENST00000490278 CYP2S1Q96SQ9 504 aa2.78□□□□□ -1.96
CD46-216ENST00000490278 MCHR1Q99705 422 aa2.78□□□□□ -1.96
CD46-216ENST00000490278 CNPY3Q9BT09 278 aa2.78□□□□□ -1.96
CD46-216ENST00000490278 PTGES2Q9H7Z7 377 aa2.78□□□□□ -1.96
CD46-216ENST00000490278 AIPL1Q9NZN9 384 aa2.78□□□□□ -1.96
CD46-216ENST00000490278 TMOD2Q9NZR1 351 aa2.78□□□□□ -1.96
CD46-216ENST00000490278 GNG12Q9UBI6 72 aa2.78□□□□□ -1.96
CD46-216ENST00000490278 MAD1L1Q9Y6D9 718 aa2.78□□□□□ -1.96
CD46-216ENST00000490278 ZNF646O15015 1829 aaPredicted RBP2.77□□□□□ -1.97
CD46-216ENST00000490278 FRMPD4Q14CM0 1322 aa2.77□□□□□ -1.97
CD46-216ENST00000490278 IGHV7-81A0A0B4J1V7 117 aa2.77□□□□□ -1.97
CD46-216ENST00000490278 A0A1W2PNV4 684 aa2.77□□□□□ -1.97
CD46-216ENST00000490278 A8MUI8 341 aa2.77□□□□□ -1.97
CD46-216ENST00000490278 ANGPT2O15123 496 aa2.77□□□□□ -1.97
CD46-216ENST00000490278 MSH4O15457 936 aa2.77□□□□□ -1.97
CD46-216ENST00000490278 ZSCAN12O43309 604 aa2.77□□□□□ -1.97
CD46-216ENST00000490278 NEBLO76041 1014 aa2.77□□□□□ -1.97
CD46-216ENST00000490278 GUCA1CO95843 209 aa2.77□□□□□ -1.97
CD46-216ENST00000490278 OR8U8P0C7N1 319 aa2.77□□□□□ -1.97
CD46-216ENST00000490278 HSPA5P11021 654 aaKnown RBP2.77□□□□□ -1.97
CD46-216ENST00000490278 NT5EP21589 574 aa2.77□□□□□ -1.97
CD46-216ENST00000490278 DRD5P21918 477 aa2.77□□□□□ -1.97
CD46-216ENST00000490278 CALB2P22676 271 aa2.77□□□□□ -1.97
CD46-216ENST00000490278 NTSP30990 170 aa2.77□□□□□ -1.97
CD46-216ENST00000490278 HPDP32754 393 aaPredicted RBP2.77□□□□□ -1.97
CD46-216ENST00000490278 EPHX2P34913 555 aa2.77□□□□□ -1.97
CD46-216ENST00000490278 CNTN2Q02246 1040 aa2.77□□□□□ -1.97
CD46-216ENST00000490278 KLHL30Q0D2K2 578 aa2.77□□□□□ -1.97
CD46-216ENST00000490278 PJVKQ0ZLH3 352 aa2.77□□□□□ -1.97
CD46-216ENST00000490278 ELAVL3Q14576 367 aaKnown RBP2.77□□□□□ -1.97
CD46-216ENST00000490278 SLC36A3Q495N2 470 aa2.77□□□□□ -1.97
CD46-216ENST00000490278 CFAP221Q4G0U5 840 aa2.77□□□□□ -1.97
CD46-216ENST00000490278 LIPNQ5VXI9 398 aa2.77□□□□□ -1.97
CD46-216ENST00000490278 HSD17B13Q7Z5P4 300 aaPredicted RBP2.77□□□□□ -1.97
CD46-216ENST00000490278 TMEM179BQ7Z7N9 219 aa2.77□□□□□ -1.97
CD46-216ENST00000490278 SKA3Q8IX90 412 aa2.77□□□□□ -1.97
CD46-216ENST00000490278 LRRC43Q8N309 656 aa2.77□□□□□ -1.97
CD46-216ENST00000490278 TEX9Q8N6V9 391 aa2.77□□□□□ -1.97
CD46-216ENST00000490278 OR2L5Q8NG80 312 aa2.77□□□□□ -1.97
CD46-216ENST00000490278 LINC01006Q8NI28 216 aa2.77□□□□□ -1.97
CD46-216ENST00000490278 PNPT1Q8TCS8 783 aaKnown RBP2.77□□□□□ -1.97
CD46-216ENST00000490278 SLC5A11Q8WWX8 675 aa2.77□□□□□ -1.97
CD46-216ENST00000490278 OSTF1Q92882 214 aa2.77□□□□□ -1.97
CD46-216ENST00000490278 NEIL2Q969S2 332 aa2.77□□□□□ -1.97
CD46-216ENST00000490278 DTNBP1Q96EV8 351 aa2.77□□□□□ -1.97
CD46-216ENST00000490278 CELF6Q96J87 481 aaKnown RBP2.77□□□□□ -1.97
CD46-216ENST00000490278 ZIM3Q96PE6 472 aa2.77□□□□□ -1.97
CD46-216ENST00000490278 SMIM14Q96QK8 99 aa2.77□□□□□ -1.97
CD46-216ENST00000490278 MEAF6Q9HAF1 191 aa2.77□□□□□ -1.97
CD46-216ENST00000490278 PDFQ9HBH1 243 aa2.77□□□□□ -1.97
CD46-216ENST00000490278 PALMDQ9NP74 551 aa2.77□□□□□ -1.97
CD46-216ENST00000490278 NANSQ9NR45 359 aa2.77□□□□□ -1.97
CD46-216ENST00000490278 PLSCR3Q9NRY6 295 aa2.77□□□□□ -1.97
CD46-216ENST00000490278 EPS15L1Q9UBC2 864 aa2.77□□□□□ -1.97
CD46-216ENST00000490278 SH3BGRL2Q9UJC5 107 aa2.77□□□□□ -1.97
CD46-216ENST00000490278 CELA1Q9UNI1 258 aa2.77□□□□□ -1.97
CD46-216ENST00000490278 OR10H1Q9Y4A9 318 aa2.77□□□□□ -1.97
CD46-216ENST00000490278 ALG6Q9Y672 507 aa2.77□□□□□ -1.97
CD46-216ENST00000490278 OBSCNQ5VST9 7968 aa2.76□□□□□ -1.97
CD46-216ENST00000490278 TUBAL3A6NHL2 446 aa2.76□□□□□ -1.97
CD46-216ENST00000490278 ZNF705EA8MWA4 302 aaPredicted RBP2.76□□□□□ -1.97
CD46-216ENST00000490278 BCAS1O75363 584 aaPredicted RBP2.76□□□□□ -1.97
CD46-216ENST00000490278 UGT2B17O75795 530 aa2.76□□□□□ -1.97
CD46-216ENST00000490278 TM7SF2O76062 418 aa2.76□□□□□ -1.97
CD46-216ENST00000490278 DUX4L4P0CJ87 422 aa2.76□□□□□ -1.97
CD46-216ENST00000490278 CD80P33681 288 aa2.76□□□□□ -1.97
CD46-216ENST00000490278 AP3M2P53677 418 aa2.76□□□□□ -1.97
CD46-216ENST00000490278 ZNF45Q02386 682 aa2.76□□□□□ -1.97
CD46-216ENST00000490278 SLC10A7Q0GE19 358 aa2.76□□□□□ -1.97
CD46-216ENST00000490278 ELP6Q0PNE2 266 aa2.76□□□□□ -1.97
CD46-216ENST00000490278 SNTB2Q13425 540 aaKnown RBP2.76□□□□□ -1.97
CD46-216ENST00000490278 SPATA46Q5T0L3 261 aa2.76□□□□□ -1.97
CD46-216ENST00000490278 FAM71F2Q6NXP2 309 aa2.76□□□□□ -1.97
CD46-216ENST00000490278 FAM199XQ6PEV8 388 aaPredicted RBP2.76□□□□□ -1.97
CD46-216ENST00000490278 SCARA5Q6ZMJ2 495 aa2.76□□□□□ -1.97
CD46-216ENST00000490278 KRTAP5-2Q701N4 177 aa2.76□□□□□ -1.97
CD46-216ENST00000490278 ARMCX2Q7L311 632 aa2.76□□□□□ -1.97
CD46-216ENST00000490278 ACOT1Q86TX2 421 aa2.76□□□□□ -1.97
CD46-216ENST00000490278 ZNF589Q86UQ0 364 aaPredicted RBP2.76□□□□□ -1.97
CD46-216ENST00000490278 ZDHHC21Q8IVQ6 265 aa2.76□□□□□ -1.97
CD46-216ENST00000490278 MTURNQ8N3F0 131 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms