RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 ATAD3AQ9NVI7 634 aa17.32■□□□□ 0.36
TNFRSF1B-202ENST00000489921 ASIC5Q9NY37 505 aa17.32■□□□□ 0.36
TNFRSF1B-202ENST00000489921 SYNGR4O95473 234 aa17.31■□□□□ 0.36
TNFRSF1B-202ENST00000489921 ELK4P28324 431 aa17.31■□□□□ 0.36
TNFRSF1B-202ENST00000489921 ADH6P28332 368 aa17.31■□□□□ 0.36
TNFRSF1B-202ENST00000489921 CLDN8P56748 225 aa17.31■□□□□ 0.36
TNFRSF1B-202ENST00000489921 RPS26P62854 115 aaKnown RBP17.31■□□□□ 0.36
TNFRSF1B-202ENST00000489921 WDR93Q6P2C0 686 aa17.31■□□□□ 0.36
TNFRSF1B-202ENST00000489921 EMBQ6PCB8 327 aa17.31■□□□□ 0.36
TNFRSF1B-202ENST00000489921 BIVMQ86UB2 503 aa17.31■□□□□ 0.36
TNFRSF1B-202ENST00000489921 CLECL1Q8IZS7 167 aa17.31■□□□□ 0.36
TNFRSF1B-202ENST00000489921 CLEC4FQ8N1N0 589 aa17.31■□□□□ 0.36
TNFRSF1B-202ENST00000489921 ABHD3Q8WU67 409 aa17.31■□□□□ 0.36
TNFRSF1B-202ENST00000489921 PIGTQ969N2 578 aa17.31■□□□□ 0.36
TNFRSF1B-202ENST00000489921 MOAP1Q96BY2 351 aa17.31■□□□□ 0.36
TNFRSF1B-202ENST00000489921 PKNOX2Q96KN3 472 aa17.31■□□□□ 0.36
TNFRSF1B-202ENST00000489921 COQ10BQ9H8M1 238 aa17.31■□□□□ 0.36
TNFRSF1B-202ENST00000489921 FAF1Q9UNN5 650 aaPredicted RBP17.31■□□□□ 0.36
TNFRSF1B-202ENST00000489921 DTNAQ9Y4J8 743 aa17.31■□□□□ 0.36
TNFRSF1B-202ENST00000489921 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.3■□□□□ 0.36
TNFRSF1B-202ENST00000489921 ETV2O00321 342 aaPredicted RBP17.3■□□□□ 0.36
TNFRSF1B-202ENST00000489921 DNAJA2O60884 412 aa17.3■□□□□ 0.36
TNFRSF1B-202ENST00000489921 SCN2BO60939 215 aa17.3■□□□□ 0.36
TNFRSF1B-202ENST00000489921 SOX30O94993 753 aa17.3■□□□□ 0.36
TNFRSF1B-202ENST00000489921 TUBBP07437 444 aa17.3■□□□□ 0.36
TNFRSF1B-202ENST00000489921 PPP3CBP16298 524 aa17.3■□□□□ 0.36
TNFRSF1B-202ENST00000489921 PRKCAP17252 672 aa17.3■□□□□ 0.36
TNFRSF1B-202ENST00000489921 ATP6V1C1P21283 382 aa17.3■□□□□ 0.36
TNFRSF1B-202ENST00000489921 ME2P23368 584 aa17.3■□□□□ 0.36
TNFRSF1B-202ENST00000489921 SUMO3P55854 103 aaPredicted RBP17.3■□□□□ 0.36
TNFRSF1B-202ENST00000489921 SLC25A53Q5H9E4 307 aa17.3■□□□□ 0.36
TNFRSF1B-202ENST00000489921 BEND4Q6ZU67 534 aa17.3■□□□□ 0.36
TNFRSF1B-202ENST00000489921 OLIG3Q7RTU3 272 aa17.3■□□□□ 0.36
TNFRSF1B-202ENST00000489921 NUFIP2Q7Z417 695 aaKnown RBP17.3■□□□□ 0.36
TNFRSF1B-202ENST00000489921 NUDCD3Q8IVD9 361 aa17.3■□□□□ 0.36
TNFRSF1B-202ENST00000489921 CIARTQ8N365 385 aaPredicted RBP17.3■□□□□ 0.36
TNFRSF1B-202ENST00000489921 ZNF781Q8N8C0 355 aa17.3■□□□□ 0.36
TNFRSF1B-202ENST00000489921 ZNF527Q8NB42 609 aa17.3■□□□□ 0.36
TNFRSF1B-202ENST00000489921 PRPF18Q99633 342 aaKnown RBP17.3■□□□□ 0.36
TNFRSF1B-202ENST00000489921 C12orf49Q9H741 205 aa17.3■□□□□ 0.36
TNFRSF1B-202ENST00000489921 AKTIPQ9H8T0 292 aa17.3■□□□□ 0.36
TNFRSF1B-202ENST00000489921 GPC6Q9Y625 555 aaPredicted RBP17.3■□□□□ 0.36
TNFRSF1B-202ENST00000489921 CENPVL1A0A0U1RR11 272 aa17.29■□□□□ 0.36
TNFRSF1B-202ENST00000489921 FCMRO60667 390 aa17.29■□□□□ 0.36
TNFRSF1B-202ENST00000489921 SMPD2O60906 423 aa17.29■□□□□ 0.36
TNFRSF1B-202ENST00000489921 GCM2O75603 506 aaPredicted RBP17.29■□□□□ 0.36
TNFRSF1B-202ENST00000489921 PLAUP00749 431 aa17.29■□□□□ 0.36
TNFRSF1B-202ENST00000489921 KRT16P08779 473 aa17.29■□□□□ 0.36
TNFRSF1B-202ENST00000489921 INHBBP09529 407 aa17.29■□□□□ 0.36
TNFRSF1B-202ENST00000489921 FPR1P21462 350 aa17.29■□□□□ 0.36
TNFRSF1B-202ENST00000489921 PHC1P78364 1004 aa17.29■□□□□ 0.36
TNFRSF1B-202ENST00000489921 ZNF844Q08AG5 666 aa17.29■□□□□ 0.36
TNFRSF1B-202ENST00000489921 SMU1Q2TAY7 513 aa17.29■□□□□ 0.36
TNFRSF1B-202ENST00000489921 TMEM176BQ3YBM2 270 aaPredicted RBP17.29■□□□□ 0.36
TNFRSF1B-202ENST00000489921 SPDYE7PQ495Y7 208 aa17.29■□□□□ 0.36
TNFRSF1B-202ENST00000489921 Q5PR19 223 aa17.29■□□□□ 0.36
TNFRSF1B-202ENST00000489921 PDSS1Q5T2R2 415 aa17.29■□□□□ 0.36
TNFRSF1B-202ENST00000489921 OR4F3Q6IEY1 312 aa17.29■□□□□ 0.36
TNFRSF1B-202ENST00000489921 Q71RC1 249 aaPredicted RBP17.29■□□□□ 0.36
TNFRSF1B-202ENST00000489921 C6orf120Q7Z4R8 191 aa17.29■□□□□ 0.36
TNFRSF1B-202ENST00000489921 TUSC5Q8IXB3 177 aa17.29■□□□□ 0.36
TNFRSF1B-202ENST00000489921 MREGQ8N565 214 aa17.29■□□□□ 0.36
TNFRSF1B-202ENST00000489921 ARSGQ96EG1 525 aa17.29■□□□□ 0.36
TNFRSF1B-202ENST00000489921 ZIM3Q96PE6 472 aa17.29■□□□□ 0.36
TNFRSF1B-202ENST00000489921 TMEM204Q9BSN7 226 aa17.29■□□□□ 0.36
TNFRSF1B-202ENST00000489921 ING1Q9UK53 422 aaPredicted RBP17.29■□□□□ 0.36
TNFRSF1B-202ENST00000489921 WDR91A4D1P6 747 aa17.28■□□□□ 0.36
TNFRSF1B-202ENST00000489921 GTPBP1O00178 669 aaKnown RBP17.28■□□□□ 0.36
TNFRSF1B-202ENST00000489921 CFLARO15519 480 aa17.28■□□□□ 0.36
TNFRSF1B-202ENST00000489921 DHRS4L1P0CG22 281 aa17.28■□□□□ 0.36
TNFRSF1B-202ENST00000489921 PSMB1P20618 241 aaKnown RBP17.28■□□□□ 0.36
TNFRSF1B-202ENST00000489921 MATN1P21941 496 aa17.28■□□□□ 0.36
TNFRSF1B-202ENST00000489921 MPP2Q14168 576 aa17.28■□□□□ 0.36
TNFRSF1B-202ENST00000489921 PGS1Q32NB8 556 aa17.28■□□□□ 0.36
TNFRSF1B-202ENST00000489921 BEX5Q5H9J7 111 aa17.28■□□□□ 0.36
TNFRSF1B-202ENST00000489921 PDZK1Q5T2W1 519 aa17.28■□□□□ 0.36
TNFRSF1B-202ENST00000489921 AP1ARQ63HQ0 302 aa17.28■□□□□ 0.36
TNFRSF1B-202ENST00000489921 GTF2IRD2BQ6EKJ0 949 aa17.28■□□□□ 0.36
TNFRSF1B-202ENST00000489921 C20orf204Q6ZNR8 217 aa17.28■□□□□ 0.36
TNFRSF1B-202ENST00000489921 GTF2IRD2Q86UP8 949 aa17.28■□□□□ 0.36
TNFRSF1B-202ENST00000489921 GABRG1Q8N1C3 465 aa17.28■□□□□ 0.36
TNFRSF1B-202ENST00000489921 OR5W2Q8NH69 310 aa17.28■□□□□ 0.36
TNFRSF1B-202ENST00000489921 CPNE4Q96A23 557 aaPredicted RBP17.28■□□□□ 0.36
TNFRSF1B-202ENST00000489921 PPP1R36Q96LQ0 422 aa17.28■□□□□ 0.36
TNFRSF1B-202ENST00000489921 SORT1Q99523 831 aa17.28■□□□□ 0.36
TNFRSF1B-202ENST00000489921 CCL19Q99731 98 aa17.28■□□□□ 0.36
TNFRSF1B-202ENST00000489921 ACTR6Q9GZN1 396 aa17.28■□□□□ 0.36
TNFRSF1B-202ENST00000489921 NMUR2Q9GZQ4 415 aa17.28■□□□□ 0.36
TNFRSF1B-202ENST00000489921 OR10A4Q9H209 315 aa17.28■□□□□ 0.36
TNFRSF1B-202ENST00000489921 NOP53Q9NZM5 478 aaKnown RBP17.28■□□□□ 0.36
TNFRSF1B-202ENST00000489921 GPR52Q9Y2T5 361 aa17.28■□□□□ 0.36
TNFRSF1B-202ENST00000489921 FN1P02751 2386 aaKnown RBP17.28■□□□□ 0.36
TNFRSF1B-202ENST00000489921 H3BNH8 94 aa17.27■□□□□ 0.36
TNFRSF1B-202ENST00000489921 RNASET2O00584 256 aaKnown RBP17.27■□□□□ 0.36
TNFRSF1B-202ENST00000489921 ANKRD28O15084 1053 aa17.27■□□□□ 0.36
TNFRSF1B-202ENST00000489921 ZNF264O43296 627 aa17.27■□□□□ 0.36
TNFRSF1B-202ENST00000489921 ARHGEF9O43307 516 aa17.27■□□□□ 0.36
TNFRSF1B-202ENST00000489921 EIF4E2O60573 245 aaKnown RBP17.27■□□□□ 0.36
TNFRSF1B-202ENST00000489921 NUDT14O95848 222 aa17.27■□□□□ 0.36
TNFRSF1B-202ENST00000489921 ENPP1P22413 925 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms