RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 PRAC2D3DTV9 90 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 PDLIM1O00151 329 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 CLDN5O00501 218 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 ZNF197O14709 1029 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 STX7O15400 261 aaKnown RBP2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 RS1O15537 224 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 RNASEH1O60930 286 aaKnown RBP2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 WBP4O75554 376 aaKnown RBP2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 BRI3O95415 125 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 H6PDO95479 791 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 PGK1P00558 417 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 PIGRP01833 764 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 APOHP02749 345 aaPredicted RBP2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 ATP1B1P05026 303 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 TFAP2AP05549 437 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 ALOX5P09917 674 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 HLA-DOBP13765 273 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 POU2F1P14859 743 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 PRKACAP17612 351 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 ZNF10P21506 573 aaPredicted RBP2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 CASP14P31944 242 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 CD80P33681 288 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 HPCAL1P37235 193 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 BDKRB1P46663 353 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 PDX1P52945 283 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 CDH4P55283 916 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 OR1D5P58170 312 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 HERVK_113P63132 956 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 MRPS6P82932 125 aaKnown RBP2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 NCBP1Q09161 790 aaKnown RBP2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 BST2Q10589 180 aaKnown RBP2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 CNTN1Q12860 1018 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 GPR176Q14439 515 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 OPCMLQ14982 345 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 ZNF74Q16587 644 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 PHKG1Q16816 387 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 ACSF3Q4G176 576 aaPredicted RBP2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 TCHHL1Q5QJ38 904 aaPredicted RBP2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 CELF3Q5SZQ8 465 aaKnown RBP2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 C6orf183Q5T699 404 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 GFRALQ6UXV0 394 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 ASCL4Q6XD76 172 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 DPY19L2P2Q6ZN68 376 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 NDUFAF7Q7L592 441 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 NIPA1Q7RTP0 329 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 VTCN1Q7Z7D3 282 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 TMEM219Q86XT9 240 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 HPS6Q86YV9 775 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 RNF149Q8NC42 400 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 OR4F17Q8NGA8 305 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 OR5L2Q8NGL0 311 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 OR13C5Q8NGS8 318 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 OR4F5Q8NH21 305 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 OR1F12Q8NHA8 337 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 RHEBL1Q8TAI7 183 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 NDNFQ8TB73 568 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 MARCH1Q8TCQ1 289 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 LRRC15Q8TF66 581 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 C10orf35Q96D05 121 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 IL17FQ96PD4 163 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 OR4F4Q96R69 305 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 TMEM121Q9BTD3 319 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 TSSK1BQ9BXA7 367 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 RAB11FIP5Q9BXF6 653 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 ERVK-6Q9BXR3 956 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 ROGDIQ9GZN7 287 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 IQCGQ9H095 443 aaKnown RBP2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 ELOVL6Q9H5J4 265 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 ZNF275Q9NSD4 429 aaPredicted RBP2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 RNF186Q9NXI6 227 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 SLC2A8Q9NY64 477 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 GPR83Q9NYM4 423 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 SIGLEC8Q9NYZ4 499 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 ZNF319Q9P2F9 582 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 CTSFQ9UBX1 484 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 PITPNC1Q9UKF7 332 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 GAB2Q9UQC2 676 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 CA5BQ9Y2D0 317 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 PCDHAC2Q9Y5I4 1007 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 TIMM10BQ9Y5J6 103 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 RNF215Q9Y6U7 377 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 COL5A3P25940 1745 aaPredicted RBP2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 COL24A1Q17RW2 1714 aa2.76□□□□□ -1.97
DEPDC1-204ENST00000489862 C4BP0C0L5 1744 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 PPIAL4CA0A0B4J2A2 164 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 FAM74A7A6NL05 159 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 ZNF99A8MXY4 864 aaPredicted RBP2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 SNURFLB1AK76 121 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 TULP2O00295 520 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 BCKDKO14874 412 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 LATO43561 262 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 OR2F2O95006 317 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 CLDN14O95500 239 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 APRTP07741 180 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 SP1P08047 785 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 IGFBP1P08833 259 aaPredicted RBP2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 PPIAL4GP0DN37 164 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 FGF5P12034 268 aa2.75□□□□□ -1.97
DEPDC1-204ENST00000489862 CA4P22748 312 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms