RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 REEP3Q6NUK4 255 aa10.03□□□□□ -0.8
CPSF7-212ENST00000489728 B3GNT6Q6ZMB0 384 aa10.03□□□□□ -0.8
CPSF7-212ENST00000489728 NET1Q7Z628 596 aaPredicted RBP10.03□□□□□ -0.8
CPSF7-212ENST00000489728 MTDHQ86UE4 582 aaKnown RBP10.03□□□□□ -0.8
CPSF7-212ENST00000489728 KRT73Q86Y46 540 aa10.03□□□□□ -0.8
CPSF7-212ENST00000489728 GRAMD2AQ8IUY3 354 aa10.03□□□□□ -0.8
CPSF7-212ENST00000489728 ZPLD1Q8TCW7 415 aa10.03□□□□□ -0.8
CPSF7-212ENST00000489728 WDR60Q8WVS4 1066 aa10.03□□□□□ -0.8
CPSF7-212ENST00000489728 ST8SIA1Q92185 356 aa10.03□□□□□ -0.8
CPSF7-212ENST00000489728 LRRC58Q96CX6 371 aa10.03□□□□□ -0.8
CPSF7-212ENST00000489728 CMTM5Q96DZ9 223 aa10.03□□□□□ -0.8
CPSF7-212ENST00000489728 WDYHV1Q96HA8 205 aa10.03□□□□□ -0.8
CPSF7-212ENST00000489728 CCDC120Q96HB5 630 aa10.03□□□□□ -0.8
CPSF7-212ENST00000489728 MRGPRX4Q96LA9 322 aa10.03□□□□□ -0.8
CPSF7-212ENST00000489728 UCN2Q96RP3 112 aa10.03□□□□□ -0.8
CPSF7-212ENST00000489728 SPATA5L1Q9BVQ7 753 aa10.03□□□□□ -0.8
CPSF7-212ENST00000489728 CCDC106Q9BWC9 280 aa10.03□□□□□ -0.8
CPSF7-212ENST00000489728 RUBCNLQ9H714 662 aa10.03□□□□□ -0.8
CPSF7-212ENST00000489728 KAT8Q9H7Z6 458 aaKnown RBP10.03□□□□□ -0.8
CPSF7-212ENST00000489728 EVA1AQ9H8M9 152 aa10.03□□□□□ -0.8
CPSF7-212ENST00000489728 MED17Q9NVC6 651 aa10.03□□□□□ -0.8
CPSF7-212ENST00000489728 ARMCX1Q9P291 453 aa10.03□□□□□ -0.8
CPSF7-212ENST00000489728 ZNF232Q9UNY5 417 aa10.03□□□□□ -0.8
CPSF7-212ENST00000489728 CARD8Q9Y2G2 431 aa10.03□□□□□ -0.8
CPSF7-212ENST00000489728 SLC6A5Q9Y345 797 aa10.03□□□□□ -0.8
CPSF7-212ENST00000489728 CENPVL1A0A0U1RR11 272 aa10.02□□□□□ -0.81
CPSF7-212ENST00000489728 CD8B2A6NJW9 211 aa10.02□□□□□ -0.81
CPSF7-212ENST00000489728 FXYD1O00168 92 aa10.02□□□□□ -0.81
CPSF7-212ENST00000489728 PGM3O95394 542 aa10.02□□□□□ -0.81
CPSF7-212ENST00000489728 NTN1O95631 604 aa10.02□□□□□ -0.81
CPSF7-212ENST00000489728 EPPINO95925 133 aa10.02□□□□□ -0.81
CPSF7-212ENST00000489728 FAM107AO95990 144 aa10.02□□□□□ -0.81
CPSF7-212ENST00000489728 COX4I1P13073 169 aa10.02□□□□□ -0.81
CPSF7-212ENST00000489728 UQCRBP14927 111 aa10.02□□□□□ -0.81
CPSF7-212ENST00000489728 POU3F2P20265 443 aaPredicted RBP10.02□□□□□ -0.81
CPSF7-212ENST00000489728 SLC6A2P23975 617 aa10.02□□□□□ -0.81
CPSF7-212ENST00000489728 PSMA4P25789 261 aaKnown RBP10.02□□□□□ -0.81
CPSF7-212ENST00000489728 CDK6Q00534 326 aa10.02□□□□□ -0.81
CPSF7-212ENST00000489728 SF3A3Q12874 501 aaKnown RBP eCLIP10.02□□□□□ -0.819e-6■■□□□ 12.4
CPSF7-212ENST00000489728 CYP51A1Q16850 503 aa10.02□□□□□ -0.81
CPSF7-212ENST00000489728 ACSF3Q4G176 576 aaPredicted RBP10.02□□□□□ -0.81
CPSF7-212ENST00000489728 RIPPLY2Q5TAB7 128 aa10.02□□□□□ -0.81
CPSF7-212ENST00000489728 NSUN5P2Q63ZY6 315 aa10.02□□□□□ -0.81
CPSF7-212ENST00000489728 FAM91A1Q658Y4 838 aa10.02□□□□□ -0.81
CPSF7-212ENST00000489728 NANOGP8Q6NSW7 305 aa10.02□□□□□ -0.81
CPSF7-212ENST00000489728 ZNF585AQ6P3V2 769 aa10.02□□□□□ -0.81
CPSF7-212ENST00000489728 XKRXQ6PP77 449 aa10.02□□□□□ -0.81
CPSF7-212ENST00000489728 CBLN3Q6UW01 205 aa10.02□□□□□ -0.81
CPSF7-212ENST00000489728 ARSKQ6UWY0 536 aa10.02□□□□□ -0.81
CPSF7-212ENST00000489728 HACD2Q6Y1H2 254 aa10.02□□□□□ -0.81
CPSF7-212ENST00000489728 LACC1Q8IV20 430 aa10.02□□□□□ -0.81
CPSF7-212ENST00000489728 ZNF808Q8N4W9 903 aaPredicted RBP10.02□□□□□ -0.81
CPSF7-212ENST00000489728 MEIOBQ8N635 442 aa10.02□□□□□ -0.81
CPSF7-212ENST00000489728 TMCO5AQ8N6Q1 288 aa10.02□□□□□ -0.81
CPSF7-212ENST00000489728 C11orf65Q8NCR3 313 aa10.02□□□□□ -0.81
CPSF7-212ENST00000489728 HIPK4Q8NE63 616 aa10.02□□□□□ -0.81
CPSF7-212ENST00000489728 BHLHE22Q8NFJ8 381 aaPredicted RBP10.02□□□□□ -0.81
CPSF7-212ENST00000489728 OR5M9Q8NGP3 310 aa10.02□□□□□ -0.81
CPSF7-212ENST00000489728 OR52P1PQ8NH57 321 aa10.02□□□□□ -0.81
CPSF7-212ENST00000489728 GPR119Q8TDV5 335 aa10.02□□□□□ -0.81
CPSF7-212ENST00000489728 TMEM234Q8WY98 164 aa10.02□□□□□ -0.81
CPSF7-212ENST00000489728 SH3YL1Q96HL8 342 aaPredicted RBP10.02□□□□□ -0.81
CPSF7-212ENST00000489728 ZNF607Q96SK3 696 aa10.02□□□□□ -0.81
CPSF7-212ENST00000489728 THUMPD3Q9BV44 507 aaKnown RBP10.02□□□□□ -0.81
CPSF7-212ENST00000489728 IKZF5Q9H5V7 419 aa10.02□□□□□ -0.81
CPSF7-212ENST00000489728 NANOGQ9H9S0 305 aa10.02□□□□□ -0.81
CPSF7-212ENST00000489728 CALHM2Q9HA72 323 aa10.02□□□□□ -0.81
CPSF7-212ENST00000489728 PAQR5Q9NXK6 330 aaPredicted RBP10.02□□□□□ -0.81
CPSF7-212ENST00000489728 ANGPT4Q9Y264 503 aa10.02□□□□□ -0.81
CPSF7-212ENST00000489728 FAM215AQ9Y5M1 114 aa10.02□□□□□ -0.81
CPSF7-212ENST00000489728 BAHCC1Q9P281 2608 aa10.02□□□□□ -0.81
CPSF7-212ENST00000489728 FREM3P0C091 2139 aa10.01□□□□□ -0.81
CPSF7-212ENST00000489728 PHF3Q92576 2039 aaKnown RBP10.01□□□□□ -0.81
CPSF7-212ENST00000489728 CDHR4A6H8M9 788 aa10.01□□□□□ -0.81
CPSF7-212ENST00000489728 PRORSD1PA6NEY8 169 aa10.01□□□□□ -0.81
CPSF7-212ENST00000489728 GJE1A6NN92 205 aa10.01□□□□□ -0.81
CPSF7-212ENST00000489728 H0Y3Z8 333 aa10.01□□□□□ -0.81
CPSF7-212ENST00000489728 NDUFAB1O14561 156 aa10.01□□□□□ -0.81
CPSF7-212ENST00000489728 NUDT14O95848 222 aa10.01□□□□□ -0.81
CPSF7-212ENST00000489728 NUDT7P0C024 238 aa10.01□□□□□ -0.81
CPSF7-212ENST00000489728 PABPC4LP0CB38 370 aaKnown RBP10.01□□□□□ -0.81
CPSF7-212ENST00000489728 UBTFL6P0CB48 400 aaPredicted RBP10.01□□□□□ -0.81
CPSF7-212ENST00000489728 PRKCAP17252 672 aa10.01□□□□□ -0.81
CPSF7-212ENST00000489728 ME2P23368 584 aa10.01□□□□□ -0.81
CPSF7-212ENST00000489728 FKBP2P26885 142 aaKnown RBP10.01□□□□□ -0.81
CPSF7-212ENST00000489728 PRKAR1BP31321 381 aa10.01□□□□□ -0.81
CPSF7-212ENST00000489728 TIMP3P35625 211 aa10.01□□□□□ -0.81
CPSF7-212ENST00000489728 CLDN18P56856 261 aa10.01□□□□□ -0.81
CPSF7-212ENST00000489728 MTPNP58546 118 aa10.01□□□□□ -0.81
CPSF7-212ENST00000489728 RAC1P63000 192 aa10.01□□□□□ -0.81
CPSF7-212ENST00000489728 EEF1A1P68104 462 aaKnown RBP10.01□□□□□ -0.81
CPSF7-212ENST00000489728 SCARB2Q14108 478 aa10.01□□□□□ -0.81
CPSF7-212ENST00000489728 ADRM1Q16186 407 aa10.01□□□□□ -0.81
CPSF7-212ENST00000489728 DCST1Q5T197 706 aa10.01□□□□□ -0.81
CPSF7-212ENST00000489728 MRPL2Q5T653 305 aaKnown RBP10.01□□□□□ -0.81
CPSF7-212ENST00000489728 INTS11Q5TA45 600 aaKnown RBP10.01□□□□□ -0.81
CPSF7-212ENST00000489728 GKAP1Q5VSY0 366 aaPredicted RBP10.01□□□□□ -0.81
CPSF7-212ENST00000489728 ADGRE4PQ86SQ3 457 aa10.01□□□□□ -0.81
CPSF7-212ENST00000489728 ASB5Q8WWX0 329 aa10.01□□□□□ -0.81
CPSF7-212ENST00000489728 RND1Q92730 232 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms