RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 TMCO5AQ8N6Q1 288 aa19.83■□□□□ 0.77
SMC4-221ENST00000489573 LSMEM1Q8N8F7 131 aa19.83■□□□□ 0.77
SMC4-221ENST00000489573 OR4K5Q8NGD3 323 aa19.83■□□□□ 0.77
SMC4-221ENST00000489573 SPACA9Q96E40 222 aaPredicted RBP19.83■□□□□ 0.77
SMC4-221ENST00000489573 IP6K3Q96PC2 410 aa19.83■□□□□ 0.77
SMC4-221ENST00000489573 NODALQ96S42 347 aa19.83■□□□□ 0.77
SMC4-221ENST00000489573 RTN4RQ9BZR6 473 aa19.83■□□□□ 0.77
SMC4-221ENST00000489573 LAT2Q9GZY6 243 aa19.83■□□□□ 0.77
SMC4-221ENST00000489573 ZNF556Q9HAH1 456 aa19.83■□□□□ 0.77
SMC4-221ENST00000489573 PAPOLBQ9NRJ5 636 aaKnown RBP19.83■□□□□ 0.77
SMC4-221ENST00000489573 RYDENQ9NUL5 291 aaKnown RBP19.83■□□□□ 0.77
SMC4-221ENST00000489573 MGAT4BQ9UQ53 548 aa19.83■□□□□ 0.77
SMC4-221ENST00000489573 CARD8Q9Y2G2 431 aa19.83■□□□□ 0.77
SMC4-221ENST00000489573 POFUT2Q9Y2G5 429 aa19.83■□□□□ 0.77
SMC4-221ENST00000489573 YARS2Q9Y2Z4 477 aaKnown RBP19.83■□□□□ 0.77
SMC4-221ENST00000489573 ANGPTL1O95841 491 aa19.83■□□□□ 0.76
SMC4-221ENST00000489573 ADAP00813 363 aa19.83■□□□□ 0.76
SMC4-221ENST00000489573 RYKP34925 604 aa19.83■□□□□ 0.76
SMC4-221ENST00000489573 ADARB1P78563 741 aaKnown RBP19.83■□□□□ 0.76
SMC4-221ENST00000489573 Q0VFX4 171 aa19.83■□□□□ 0.76
SMC4-221ENST00000489573 KCNAB2Q13303 367 aa19.83■□□□□ 0.76
SMC4-221ENST00000489573 TGIF1Q15583 401 aa19.83■□□□□ 0.76
SMC4-221ENST00000489573 NTRK2Q16620 822 aa19.83■□□□□ 0.76
SMC4-221ENST00000489573 ZNF730Q6ZMV8 503 aa19.83■□□□□ 0.76
SMC4-221ENST00000489573 RPS19BP1Q86WX3 136 aaKnown RBP19.83■□□□□ 0.76
SMC4-221ENST00000489573 NKAIN4Q8IVV8 208 aa19.83■□□□□ 0.76
SMC4-221ENST00000489573 CHERPQ8IWX8 916 aaKnown RBP19.83■□□□□ 0.76
SMC4-221ENST00000489573 ARMC10Q8N2F6 343 aa19.83■□□□□ 0.76
SMC4-221ENST00000489573 MARVELD2Q8N4S9 558 aa19.83■□□□□ 0.76
SMC4-221ENST00000489573 GRHL3Q8TE85 626 aa19.83■□□□□ 0.76
SMC4-221ENST00000489573 CNBD2Q96M20 576 aa19.83■□□□□ 0.76
SMC4-221ENST00000489573 NIPSNAP1Q9BPW8 284 aa19.83■□□□□ 0.76
SMC4-221ENST00000489573 ANKRD60Q9BZ19 345 aa19.83■□□□□ 0.76
SMC4-221ENST00000489573 CDCP1Q9H5V8 836 aa19.83■□□□□ 0.76
SMC4-221ENST00000489573 PCSK5Q92824 1860 aa19.82■□□□□ 0.76
SMC4-221ENST00000489573 A0A087WUU8 490 aa19.82■□□□□ 0.76
SMC4-221ENST00000489573 A0A0B4J2E0 115 aa19.82■□□□□ 0.76
SMC4-221ENST00000489573 A0A1B0GWA3 101 aa19.82■□□□□ 0.76
SMC4-221ENST00000489573 A0A1B0GX12 115 aa19.82■□□□□ 0.76
SMC4-221ENST00000489573 DCDC2BA2VCK2 349 aa19.82■□□□□ 0.76
SMC4-221ENST00000489573 CNOT1A5YKK6 2376 aaKnown RBP19.82■□□□□ 0.76
SMC4-221ENST00000489573 EIF4E2O60573 245 aaKnown RBP19.82■□□□□ 0.76
SMC4-221ENST00000489573 LYPD3O95274 346 aa19.82■□□□□ 0.76
SMC4-221ENST00000489573 GASTP01350 101 aa19.82■□□□□ 0.76
SMC4-221ENST00000489573 SDHBP21912 280 aa19.82■□□□□ 0.76
SMC4-221ENST00000489573 SOX3P41225 446 aa19.82■□□□□ 0.76
SMC4-221ENST00000489573 CCR4P51679 360 aa19.82■□□□□ 0.76
SMC4-221ENST00000489573 UGT2B15P54855 530 aa19.82■□□□□ 0.76
SMC4-221ENST00000489573 MLF1P58340 268 aa19.82■□□□□ 0.76
SMC4-221ENST00000489573 ZNF117Q03924 483 aa19.82■□□□□ 0.76
SMC4-221ENST00000489573 FCRLBQ6BAA4 426 aa19.82■□□□□ 0.76
SMC4-221ENST00000489573 PGBD2Q6P3X8 592 aa19.82■□□□□ 0.76
SMC4-221ENST00000489573 OPN5Q6U736 354 aa19.82■□□□□ 0.76
SMC4-221ENST00000489573 CBLN3Q6UW01 205 aa19.82■□□□□ 0.76
SMC4-221ENST00000489573 MISPQ8IVT2 679 aa19.82■□□□□ 0.76
SMC4-221ENST00000489573 APLFQ8IW19 511 aaPredicted RBP19.82■□□□□ 0.76
SMC4-221ENST00000489573 ZNF555Q8NEP9 628 aa19.82■□□□□ 0.76
SMC4-221ENST00000489573 RNF138Q8WVD3 245 aa19.82■□□□□ 0.76
SMC4-221ENST00000489573 ACOT11Q8WXI4 607 aaPredicted RBP19.82■□□□□ 0.76
SMC4-221ENST00000489573 RIBC2Q9H4K1 309 aa19.82■□□□□ 0.76
SMC4-221ENST00000489573 RPS6KB2Q9UBS0 482 aa19.82■□□□□ 0.76
SMC4-221ENST00000489573 EXPH5Q8NEV8 1989 aa19.81■□□□□ 0.76
SMC4-221ENST00000489573 HCRTR2O43614 444 aa19.81■□□□□ 0.76
SMC4-221ENST00000489573 LINGO3P0C6S8 592 aa19.81■□□□□ 0.76
SMC4-221ENST00000489573 LIFP15018 202 aa19.81■□□□□ 0.76
SMC4-221ENST00000489573 SLC6A8P48029 635 aa19.81■□□□□ 0.76
SMC4-221ENST00000489573 SSR4P51571 173 aa19.81■□□□□ 0.76
SMC4-221ENST00000489573 COPZ1P61923 177 aa19.81■□□□□ 0.76
SMC4-221ENST00000489573 ZNF791Q3KP31 576 aaPredicted RBP19.81■□□□□ 0.76
SMC4-221ENST00000489573 TTC23Q5W5X9 447 aa19.81■□□□□ 0.76
SMC4-221ENST00000489573 CADM2Q8N3J6 435 aa19.81■□□□□ 0.76
SMC4-221ENST00000489573 ASB15Q8WXK1 588 aa19.81■□□□□ 0.76
SMC4-221ENST00000489573 GTPBP3Q969Y2 492 aaKnown RBP19.81■□□□□ 0.76
SMC4-221ENST00000489573 SH3YL1Q96HL8 342 aaPredicted RBP19.81■□□□□ 0.76
SMC4-221ENST00000489573 PRSS27Q9BQR3 290 aa19.81■□□□□ 0.76
SMC4-221ENST00000489573 DGCR6LQ9BY27 220 aa19.81■□□□□ 0.76
SMC4-221ENST00000489573 FAM118AQ9NWS6 357 aa19.81■□□□□ 0.76
SMC4-221ENST00000489573 CHP2O43745 196 aa19.8■□□□□ 0.76
SMC4-221ENST00000489573 MAN1A2O60476 641 aa19.8■□□□□ 0.76
SMC4-221ENST00000489573 POU2F1P14859 743 aa19.8■□□□□ 0.76
SMC4-221ENST00000489573 IFNGR2P38484 337 aa19.8■□□□□ 0.76
SMC4-221ENST00000489573 PDK3Q15120 406 aa19.8■□□□□ 0.76
SMC4-221ENST00000489573 H3F3CQ6NXT2 135 aa19.8■□□□□ 0.76
SMC4-221ENST00000489573 RRM2BQ7LG56 351 aa19.8■□□□□ 0.76
SMC4-221ENST00000489573 DND1Q8IYX4 353 aaKnown RBP19.8■□□□□ 0.76
SMC4-221ENST00000489573 OR10G3Q8NGC4 313 aa19.8■□□□□ 0.76
SMC4-221ENST00000489573 RNF217Q8TC41 542 aa19.8■□□□□ 0.76
SMC4-221ENST00000489573 TMEM255BQ8WV15 326 aa19.8■□□□□ 0.76
SMC4-221ENST00000489573 GABARAPL3Q9BY60 117 aa19.8■□□□□ 0.76
SMC4-221ENST00000489573 ENOPH1Q9UHY7 261 aa19.8■□□□□ 0.76
SMC4-221ENST00000489573 AHCTF1Q8WYP5 2266 aa19.8■□□□□ 0.76
SMC4-221ENST00000489573 ADAM10O14672 748 aa19.79■□□□□ 0.76
SMC4-221ENST00000489573 OR6B1O95007 311 aa19.79■□□□□ 0.76
SMC4-221ENST00000489573 NTN1O95631 604 aa19.79■□□□□ 0.76
SMC4-221ENST00000489573 ALG10BQ5I7T1 473 aa19.79■□□□□ 0.76
SMC4-221ENST00000489573 USP51Q70EK9 711 aa19.79■□□□□ 0.76
SMC4-221ENST00000489573 PARP8Q8N3A8 854 aa19.79■□□□□ 0.76
SMC4-221ENST00000489573 PIGXQ8TBF5 258 aa19.79■□□□□ 0.76
SMC4-221ENST00000489573 NXPE2Q96DL1 559 aa19.79■□□□□ 0.76
SMC4-221ENST00000489573 SELENONQ9NZV5 590 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms