RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 GABRA1P14867 456 aa11.29□□□□□ -0.6
COL4A5-206ENST00000489230 CPN1P15169 458 aa11.29□□□□□ -0.6
COL4A5-206ENST00000489230 ZNF17P17021 662 aa11.29□□□□□ -0.6
COL4A5-206ENST00000489230 PGCP20142 388 aa11.29□□□□□ -0.6
COL4A5-206ENST00000489230 RPS4Y1P22090 263 aaKnown RBP11.29□□□□□ -0.6
COL4A5-206ENST00000489230 FKBP2P26885 142 aaKnown RBP11.29□□□□□ -0.6
COL4A5-206ENST00000489230 PGM1P36871 562 aa11.29□□□□□ -0.6
COL4A5-206ENST00000489230 NUDT2P50583 147 aa11.29□□□□□ -0.6
COL4A5-206ENST00000489230 MRPL49Q13405 166 aaKnown RBP11.29□□□□□ -0.6
COL4A5-206ENST00000489230 VEZF1Q14119 521 aa11.29□□□□□ -0.6
COL4A5-206ENST00000489230 MAPK11Q15759 364 aa11.29□□□□□ -0.6
COL4A5-206ENST00000489230 CD226Q15762 336 aa11.29□□□□□ -0.6
COL4A5-206ENST00000489230 MAPK14Q16539 360 aa11.29□□□□□ -0.6
COL4A5-206ENST00000489230 EIF2S3LQ2VIR3 472 aaKnown RBP11.29□□□□□ -0.6
COL4A5-206ENST00000489230 GXYLT1Q4G148 440 aa11.29□□□□□ -0.6
COL4A5-206ENST00000489230 EIPR1Q53HC9 387 aa11.29□□□□□ -0.6
COL4A5-206ENST00000489230 WIPI1Q5MNZ9 446 aaPredicted RBP11.29□□□□□ -0.6
COL4A5-206ENST00000489230 TMEM211Q6ICI0 200 aa11.29□□□□□ -0.6
COL4A5-206ENST00000489230 ZNF550Q7Z398 422 aa11.29□□□□□ -0.6
COL4A5-206ENST00000489230 FITM2Q8N6M3 262 aa11.29□□□□□ -0.6
COL4A5-206ENST00000489230 GATSQ8NAP1 163 aa11.29□□□□□ -0.6
COL4A5-206ENST00000489230 NFKBIDQ8NI38 313 aa11.29□□□□□ -0.6
COL4A5-206ENST00000489230 GPR119Q8TDV5 335 aa11.29□□□□□ -0.6
COL4A5-206ENST00000489230 RASSF5Q8WWW0 418 aa11.29□□□□□ -0.6
COL4A5-206ENST00000489230 MAL2Q969L2 176 aa11.29□□□□□ -0.6
COL4A5-206ENST00000489230 RELTQ969Z4 430 aa11.29□□□□□ -0.6
COL4A5-206ENST00000489230 SH3YL1Q96HL8 342 aaPredicted RBP11.29□□□□□ -0.6
COL4A5-206ENST00000489230 REXO5Q96IC2 774 aaKnown RBP11.29□□□□□ -0.6
COL4A5-206ENST00000489230 SFXN2Q96NB2 322 aa11.29□□□□□ -0.6
COL4A5-206ENST00000489230 IKZF5Q9H5V7 419 aa11.29□□□□□ -0.6
COL4A5-206ENST00000489230 KLHL28Q9NXS3 571 aa11.29□□□□□ -0.6
COL4A5-206ENST00000489230 SLC13A4Q9UKG4 626 aa11.29□□□□□ -0.6
COL4A5-206ENST00000489230 GPC6Q9Y625 555 aaPredicted RBP11.29□□□□□ -0.6
COL4A5-206ENST00000489230 AP4B1Q9Y6B7 739 aa11.29□□□□□ -0.6
COL4A5-206ENST00000489230 FIGNL2A6NMB9 653 aa11.28□□□□□ -0.6
COL4A5-206ENST00000489230 NPIPA2E9PIF3 369 aa11.28□□□□□ -0.6
COL4A5-206ENST00000489230 NPIPA3F8WFD2 350 aa11.28□□□□□ -0.6
COL4A5-206ENST00000489230 FXYD1O00168 92 aa11.28□□□□□ -0.6
COL4A5-206ENST00000489230 WDR1O75083 606 aa11.28□□□□□ -0.6
COL4A5-206ENST00000489230 SEMA7AO75326 666 aa11.28□□□□□ -0.6
COL4A5-206ENST00000489230 CYP7B1O75881 506 aa11.28□□□□□ -0.6
COL4A5-206ENST00000489230 LINGO3P0C6S8 592 aa11.28□□□□□ -0.6
COL4A5-206ENST00000489230 PABPC4LP0CB38 370 aaKnown RBP11.28□□□□□ -0.6
COL4A5-206ENST00000489230 UBTFL6P0CB48 400 aaPredicted RBP11.28□□□□□ -0.6
COL4A5-206ENST00000489230 PEPDP12955 493 aa11.28□□□□□ -0.6
COL4A5-206ENST00000489230 BMP7P18075 431 aa11.28□□□□□ -0.6
COL4A5-206ENST00000489230 PRKAR1BP31321 381 aa11.28□□□□□ -0.6
COL4A5-206ENST00000489230 PCGF2P35227 344 aa11.28□□□□□ -0.6
COL4A5-206ENST00000489230 HTR3AP46098 478 aa11.28□□□□□ -0.6
COL4A5-206ENST00000489230 GZMMP51124 257 aa11.28□□□□□ -0.6
COL4A5-206ENST00000489230 MAP2K6P52564 334 aa11.28□□□□□ -0.6
COL4A5-206ENST00000489230 GFRA1P56159 465 aa11.28□□□□□ -0.6
COL4A5-206ENST00000489230 PER3P56645 1201 aa11.28□□□□□ -0.6
COL4A5-206ENST00000489230 ZNF117Q03924 483 aa11.28□□□□□ -0.6
COL4A5-206ENST00000489230 VMACQ2NL98 169 aa11.28□□□□□ -0.6
COL4A5-206ENST00000489230 SPATS1Q496A3 300 aa11.28□□□□□ -0.6
COL4A5-206ENST00000489230 RABL3Q5HYI8 236 aa11.28□□□□□ -0.6
COL4A5-206ENST00000489230 RNF220Q5VTB9 566 aa11.28□□□□□ -0.6
COL4A5-206ENST00000489230 C16orf89Q6UX73 402 aa11.28□□□□□ -0.6
COL4A5-206ENST00000489230 CALHM3Q86XJ0 350 aa11.28□□□□□ -0.6
COL4A5-206ENST00000489230 GRAMD2AQ8IUY3 354 aa11.28□□□□□ -0.6
COL4A5-206ENST00000489230 GTPBP8Q8N3Z3 284 aaPredicted RBP11.28□□□□□ -0.6
COL4A5-206ENST00000489230 TMCO5AQ8N6Q1 288 aa11.28□□□□□ -0.6
COL4A5-206ENST00000489230 ST8SIA1Q92185 356 aa11.28□□□□□ -0.6
COL4A5-206ENST00000489230 MRGPRX4Q96LA9 322 aa11.28□□□□□ -0.6
COL4A5-206ENST00000489230 ZNF583Q96ND8 569 aa11.28□□□□□ -0.6
COL4A5-206ENST00000489230 TIMP4Q99727 224 aa11.28□□□□□ -0.6
COL4A5-206ENST00000489230 SLC39A3Q9BRY0 314 aa11.28□□□□□ -0.6
COL4A5-206ENST00000489230 SLC6A15Q9H2J7 730 aa11.28□□□□□ -0.6
COL4A5-206ENST00000489230 TP63Q9H3D4 680 aaPredicted RBP11.28□□□□□ -0.6
COL4A5-206ENST00000489230 RUBCNLQ9H714 662 aa11.28□□□□□ -0.6
COL4A5-206ENST00000489230 MED17Q9NVC6 651 aa11.28□□□□□ -0.6
COL4A5-206ENST00000489230 EML6Q6ZMW3 1958 aa11.27□□□□□ -0.61
COL4A5-206ENST00000489230 EXPH5Q8NEV8 1989 aa11.27□□□□□ -0.61
COL4A5-206ENST00000489230 TRGV8A0A0C4DH27 118 aa11.27□□□□□ -0.61
COL4A5-206ENST00000489230 ELOVL7A1L3X0 281 aa11.27□□□□□ -0.61
COL4A5-206ENST00000489230 CDHR4A6H8M9 788 aa11.27□□□□□ -0.61
COL4A5-206ENST00000489230 CFAP73A6NFT4 308 aa11.27□□□□□ -0.61
COL4A5-206ENST00000489230 GJE1A6NN92 205 aa11.27□□□□□ -0.61
COL4A5-206ENST00000489230 FAAHO00519 579 aa11.27□□□□□ -0.61
COL4A5-206ENST00000489230 GMNNO75496 209 aa11.27□□□□□ -0.61
COL4A5-206ENST00000489230 WISP2O76076 250 aa11.27□□□□□ -0.61
COL4A5-206ENST00000489230 TPOP07202 933 aa11.27□□□□□ -0.61
COL4A5-206ENST00000489230 C8BP07358 591 aa11.27□□□□□ -0.61
COL4A5-206ENST00000489230 CALB2P22676 271 aa11.27□□□□□ -0.61
COL4A5-206ENST00000489230 ME2P23368 584 aa11.27□□□□□ -0.61
COL4A5-206ENST00000489230 CA7P43166 264 aa11.27□□□□□ -0.61
COL4A5-206ENST00000489230 PSME3P61289 254 aa11.27□□□□□ -0.61
COL4A5-206ENST00000489230 COPZ1P61923 177 aa11.27□□□□□ -0.61
COL4A5-206ENST00000489230 MXRA7P84157 204 aa11.27□□□□□ -0.61
COL4A5-206ENST00000489230 HSF1Q00613 529 aa11.27□□□□□ -0.61
COL4A5-206ENST00000489230 SKP2Q13309 424 aa11.27□□□□□ -0.61
COL4A5-206ENST00000489230 SELPLGQ14242 412 aa11.27□□□□□ -0.61
COL4A5-206ENST00000489230 RAET1LQ5VY80 246 aa11.27□□□□□ -0.61
COL4A5-206ENST00000489230 C8orf82Q6P1X6 216 aaPredicted RBP11.27□□□□□ -0.61
COL4A5-206ENST00000489230 CBLN3Q6UW01 205 aa11.27□□□□□ -0.61
COL4A5-206ENST00000489230 CCDC80Q76M96 950 aa11.27□□□□□ -0.61
COL4A5-206ENST00000489230 CHMP1BQ7LBR1 199 aa11.27□□□□□ -0.61
COL4A5-206ENST00000489230 OLIG3Q7RTU3 272 aa11.27□□□□□ -0.61
COL4A5-206ENST00000489230 PTOV1Q86YD1 416 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms