RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-213ENST00000489003 ETS2P15036 469 aa13.72□□□□□ -0.21
FDPS-213ENST00000489003 CHMP24386 653 aa13.72□□□□□ -0.21
FDPS-213ENST00000489003 CPA2P48052 419 aa13.72□□□□□ -0.21
FDPS-213ENST00000489003 SKP2Q13309 424 aa13.72□□□□□ -0.21
FDPS-213ENST00000489003 CYP51A1Q16850 503 aa13.72□□□□□ -0.21
FDPS-213ENST00000489003 C4orf17Q53FE4 359 aa13.72□□□□□ -0.21
FDPS-213ENST00000489003 DCST1Q5T197 706 aa13.72□□□□□ -0.21
FDPS-213ENST00000489003 C8orf82Q6P1X6 216 aaPredicted RBP13.72□□□□□ -0.21
FDPS-213ENST00000489003 CD163Q86VB7 1156 aa13.72□□□□□ -0.21
FDPS-213ENST00000489003 CMIPQ8IY22 773 aa13.72□□□□□ -0.21
FDPS-213ENST00000489003 SLC15A3Q8IY34 581 aa13.72□□□□□ -0.21
FDPS-213ENST00000489003 C11orf65Q8NCR3 313 aa13.72□□□□□ -0.21
FDPS-213ENST00000489003 HIPK4Q8NE63 616 aa13.72□□□□□ -0.21
FDPS-213ENST00000489003 FAM71CQ8NEG0 241 aa13.72□□□□□ -0.21
FDPS-213ENST00000489003 TOR1AIP2Q8NFQ8 470 aa13.72□□□□□ -0.21
FDPS-213ENST00000489003 POC1BQ8TC44 478 aa13.72□□□□□ -0.21
FDPS-213ENST00000489003 WDYHV1Q96HA8 205 aa13.72□□□□□ -0.21
FDPS-213ENST00000489003 SFXN2Q96NB2 322 aa13.72□□□□□ -0.21
FDPS-213ENST00000489003 RLIMQ9NVW2 624 aa13.72□□□□□ -0.21
FDPS-213ENST00000489003 ALKBH4Q9NXW9 302 aa13.72□□□□□ -0.21
FDPS-213ENST00000489003 SH3BGRL2Q9UJC5 107 aa13.72□□□□□ -0.21
FDPS-213ENST00000489003 USP22Q9UPT9 525 aa13.72□□□□□ -0.21
FDPS-213ENST00000489003 IFT52Q9Y366 437 aa13.72□□□□□ -0.21
FDPS-213ENST00000489003 GPC6Q9Y625 555 aaPredicted RBP13.72□□□□□ -0.21
FDPS-213ENST00000489003 FASNP49327 2511 aaKnown RBP13.71□□□□□ -0.21
FDPS-213ENST00000489003 A0A1B0GUH1 482 aa13.71□□□□□ -0.21
FDPS-213ENST00000489003 CLEC18AA5D8T8 446 aa13.71□□□□□ -0.21
FDPS-213ENST00000489003 CCL21O00585 134 aa13.71□□□□□ -0.21
FDPS-213ENST00000489003 NDUFAB1O14561 156 aa13.71□□□□□ -0.21
FDPS-213ENST00000489003 EFNA2O43921 213 aa13.71□□□□□ -0.21
FDPS-213ENST00000489003 ADAM11O75078 769 aa13.71□□□□□ -0.21
FDPS-213ENST00000489003 THBS1P07996 1170 aa13.71□□□□□ -0.21
FDPS-213ENST00000489003 PABPC4LP0CB38 370 aaKnown RBP13.71□□□□□ -0.21
FDPS-213ENST00000489003 NID1P14543 1247 aa13.71□□□□□ -0.21
FDPS-213ENST00000489003 PSMA4P25789 261 aaKnown RBP13.71□□□□□ -0.21
FDPS-213ENST00000489003 GCKP35557 465 aa13.71□□□□□ -0.21
FDPS-213ENST00000489003 LHX2P50458 406 aa13.71□□□□□ -0.21
FDPS-213ENST00000489003 NUDT2P50583 147 aa13.71□□□□□ -0.21
FDPS-213ENST00000489003 CASP6P55212 293 aa13.71□□□□□ -0.21
FDPS-213ENST00000489003 SUMO3P55854 103 aaPredicted RBP13.71□□□□□ -0.21
FDPS-213ENST00000489003 EEF1A1P68104 462 aaKnown RBP13.71□□□□□ -0.21
FDPS-213ENST00000489003 KRT72Q14CN4 511 aa13.71□□□□□ -0.21
FDPS-213ENST00000489003 LARS2Q15031 903 aaKnown RBP13.71□□□□□ -0.21
FDPS-213ENST00000489003 VMACQ2NL98 169 aa13.71□□□□□ -0.21
FDPS-213ENST00000489003 PLPPR5Q32ZL2 321 aa13.71□□□□□ -0.21
FDPS-213ENST00000489003 ZNF311Q5JNZ3 666 aa13.71□□□□□ -0.21
FDPS-213ENST00000489003 WLSQ5T9L3 541 aa13.71□□□□□ -0.21
FDPS-213ENST00000489003 ZNF585AQ6P3V2 769 aa13.71□□□□□ -0.21
FDPS-213ENST00000489003 AAGABQ6PD74 315 aa13.71□□□□□ -0.21
FDPS-213ENST00000489003 CLEC18BQ6UXF7 455 aa13.71□□□□□ -0.21
FDPS-213ENST00000489003 C3P1Q6ZMU1 363 aa13.71□□□□□ -0.21
FDPS-213ENST00000489003 ZNF836Q6ZNA1 936 aa13.71□□□□□ -0.21
FDPS-213ENST00000489003 FJX1Q86VR8 437 aa13.71□□□□□ -0.21
FDPS-213ENST00000489003 CLEC18CQ8NCF0 446 aa13.71□□□□□ -0.21
FDPS-213ENST00000489003 ZBTB8AQ96BR9 441 aa13.71□□□□□ -0.21
FDPS-213ENST00000489003 PIGQQ9BRB3 760 aa13.71□□□□□ -0.21
FDPS-213ENST00000489003 SPATA9Q9BWV2 254 aa13.71□□□□□ -0.21
FDPS-213ENST00000489003 PRDM14Q9GZV8 571 aa13.71□□□□□ -0.21
FDPS-213ENST00000489003 TAGLN3Q9UI15 199 aa13.71□□□□□ -0.21
FDPS-213ENST00000489003 ERRFI1Q9UJM3 462 aaPredicted RBP13.71□□□□□ -0.21
FDPS-213ENST00000489003 SLC5A6Q9Y289 635 aa13.71□□□□□ -0.21
FDPS-213ENST00000489003 PHF3Q92576 2039 aaKnown RBP13.7□□□□□ -0.22
FDPS-213ENST00000489003 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.7□□□□□ -0.22
FDPS-213ENST00000489003 CDHR4A6H8M9 788 aa13.7□□□□□ -0.22
FDPS-213ENST00000489003 CCT8L1PA6NM43 557 aa13.7□□□□□ -0.22
FDPS-213ENST00000489003 AHRRA9YTQ3 701 aa13.7□□□□□ -0.22
FDPS-213ENST00000489003 FAM47E-STBD1D6RA91 191 aa13.7□□□□□ -0.22
FDPS-213ENST00000489003 M0QX08 132 aa13.7□□□□□ -0.22
FDPS-213ENST00000489003 TPST1O60507 370 aa13.7□□□□□ -0.22
FDPS-213ENST00000489003 NUDT14O95848 222 aa13.7□□□□□ -0.22
FDPS-213ENST00000489003 CPN1P15169 458 aa13.7□□□□□ -0.22
FDPS-213ENST00000489003 AQP1P29972 269 aa13.7□□□□□ -0.22
FDPS-213ENST00000489003 RYKP34925 604 aa13.7□□□□□ -0.22
FDPS-213ENST00000489003 CCR4P51679 360 aa13.7□□□□□ -0.22
FDPS-213ENST00000489003 ZNF41P51814 821 aaPredicted RBP13.7□□□□□ -0.22
FDPS-213ENST00000489003 PCBP3P57721 371 aaKnown RBP13.7□□□□□ -0.22
FDPS-213ENST00000489003 PSME3P61289 254 aa13.7□□□□□ -0.22
FDPS-213ENST00000489003 CBFBQ13951 182 aa13.7□□□□□ -0.22
FDPS-213ENST00000489003 QPRTQ15274 297 aa13.7□□□□□ -0.22
FDPS-213ENST00000489003 BCL2A1Q16548 175 aa13.7□□□□□ -0.22
FDPS-213ENST00000489003 MRPL2Q5T653 305 aaKnown RBP13.7□□□□□ -0.22
FDPS-213ENST00000489003 RAET1LQ5VY80 246 aa13.7□□□□□ -0.22
FDPS-213ENST00000489003 RTL6Q6ICC9 239 aa13.7□□□□□ -0.22
FDPS-213ENST00000489003 ENPP6Q6UWR7 440 aa13.7□□□□□ -0.22
FDPS-213ENST00000489003 GRAMD2AQ8IUY3 354 aa13.7□□□□□ -0.22
FDPS-213ENST00000489003 GTPBP8Q8N3Z3 284 aaPredicted RBP13.7□□□□□ -0.22
FDPS-213ENST00000489003 TMCO5AQ8N6Q1 288 aa13.7□□□□□ -0.22
FDPS-213ENST00000489003 FBXO27Q8NI29 283 aa13.7□□□□□ -0.22
FDPS-213ENST00000489003 NSL1Q96IY1 281 aa13.7□□□□□ -0.22
FDPS-213ENST00000489003 TP63Q9H3D4 680 aaPredicted RBP13.7□□□□□ -0.22
FDPS-213ENST00000489003 EXOSC3Q9NQT5 275 aaKnown RBP13.7□□□□□ -0.22
FDPS-213ENST00000489003 DNAJB12Q9NXW2 375 aaKnown RBP13.7□□□□□ -0.22
FDPS-213ENST00000489003 GMPR2Q9P2T1 348 aaKnown RBP13.7□□□□□ -0.22
FDPS-213ENST00000489003 CAMK2AQ9UQM7 478 aa13.7□□□□□ -0.22
FDPS-213ENST00000489003 ANGPT4Q9Y264 503 aa13.7□□□□□ -0.22
FDPS-213ENST00000489003 ZNF443Q9Y2A4 671 aaPredicted RBP13.7□□□□□ -0.22
FDPS-213ENST00000489003 AP3M1Q9Y2T2 418 aa13.7□□□□□ -0.22
FDPS-213ENST00000489003 MEMO1Q9Y316 297 aa13.7□□□□□ -0.22
FDPS-213ENST00000489003 HELZ2Q9BYK8 2649 aaKnown RBP13.7□□□□□ -0.22
FDPS-213ENST00000489003 RELNP78509 3460 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms