RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 NSRP1Q9H0G5 558 aaKnown RBP11.65□□□□□ -0.54
PHF1-210ENST00000488767 TIGARQ9NQ88 270 aa11.65□□□□□ -0.54
PHF1-210ENST00000488767 SLC6A13Q9NSD5 602 aa11.65□□□□□ -0.54
PHF1-210ENST00000488767 ICAM5Q9UMF0 924 aa11.65□□□□□ -0.54
PHF1-210ENST00000488767 ZNF232Q9UNY5 417 aa11.65□□□□□ -0.54
PHF1-210ENST00000488767 L3MBTL1Q9Y468 752 aa11.65□□□□□ -0.54
PHF1-210ENST00000488767 NCKAP5O14513 1909 aa11.64□□□□□ -0.55
PHF1-210ENST00000488767 A0A0G2JNJ9 132 aa11.64□□□□□ -0.55
PHF1-210ENST00000488767 MBD3L4A6NDZ8 208 aaPredicted RBP11.64□□□□□ -0.55
PHF1-210ENST00000488767 MBD3L3A6NE82 208 aaPredicted RBP11.64□□□□□ -0.55
PHF1-210ENST00000488767 AGAP5A6NIR3 686 aa11.64□□□□□ -0.55
PHF1-210ENST00000488767 MBD3L5A6NJ08 208 aaPredicted RBP11.64□□□□□ -0.55
PHF1-210ENST00000488767 SLC22A20A6NK97 555 aa11.64□□□□□ -0.55
PHF1-210ENST00000488767 EIF1AYO14602 144 aaKnown RBP11.64□□□□□ -0.55
PHF1-210ENST00000488767 SLC22A2O15244 555 aa11.64□□□□□ -0.55
PHF1-210ENST00000488767 HNRNPRO43390 633 aaKnown RBP11.64□□□□□ -0.55
PHF1-210ENST00000488767 BCHEP06276 602 aa11.64□□□□□ -0.55
PHF1-210ENST00000488767 TMIGD3P0DMS9 266 aaPredicted RBP11.64□□□□□ -0.55
PHF1-210ENST00000488767 CAPN3P20807 821 aa11.64□□□□□ -0.55
PHF1-210ENST00000488767 BMP5P22003 454 aa11.64□□□□□ -0.55
PHF1-210ENST00000488767 OPRM1P35372 400 aa11.64□□□□□ -0.55
PHF1-210ENST00000488767 RAC1P63000 192 aa11.64□□□□□ -0.55
PHF1-210ENST00000488767 KCNJ10P78508 379 aa11.64□□□□□ -0.55
PHF1-210ENST00000488767 CHRNEQ04844 493 aa11.64□□□□□ -0.55
PHF1-210ENST00000488767 FGFBP1Q14512 234 aa11.64□□□□□ -0.55
PHF1-210ENST00000488767 LARS2Q15031 903 aaKnown RBP11.64□□□□□ -0.55
PHF1-210ENST00000488767 RGNQ15493 299 aa11.64□□□□□ -0.55
PHF1-210ENST00000488767 ZSWIM7Q19AV6 140 aa11.64□□□□□ -0.55
PHF1-210ENST00000488767 MMEL1Q495T6 779 aa11.64□□□□□ -0.55
PHF1-210ENST00000488767 GTDC1Q4AE62 458 aa11.64□□□□□ -0.55
PHF1-210ENST00000488767 LIN52Q52LA3 116 aa11.64□□□□□ -0.55
PHF1-210ENST00000488767 SP5Q6BEB4 398 aaPredicted RBP11.64□□□□□ -0.55
PHF1-210ENST00000488767 PPP4R4Q6NUP7 873 aa11.64□□□□□ -0.55
PHF1-210ENST00000488767 CBLN3Q6UW01 205 aa11.64□□□□□ -0.55
PHF1-210ENST00000488767 MBD3L2Q8NHZ7 208 aaPredicted RBP11.64□□□□□ -0.55
PHF1-210ENST00000488767 ZNF563Q8TA94 476 aa11.64□□□□□ -0.55
PHF1-210ENST00000488767 WDR60Q8WVS4 1066 aa11.64□□□□□ -0.55
PHF1-210ENST00000488767 ARSGQ96EG1 525 aa11.64□□□□□ -0.55
PHF1-210ENST00000488767 AURKBQ96GD4 344 aaPredicted RBP11.64□□□□□ -0.55
PHF1-210ENST00000488767 MRGPRX4Q96LA9 322 aa11.64□□□□□ -0.55
PHF1-210ENST00000488767 PRRG4Q9BZD6 226 aa11.64□□□□□ -0.55
PHF1-210ENST00000488767 SLC24A3Q9HC58 644 aa11.64□□□□□ -0.55
PHF1-210ENST00000488767 SERINC1Q9NRX5 453 aa11.64□□□□□ -0.55
PHF1-210ENST00000488767 ZNF629Q9UEG4 869 aaPredicted RBP11.64□□□□□ -0.55
PHF1-210ENST00000488767 Q9UFV3 132 aa11.64□□□□□ -0.55
PHF1-210ENST00000488767 PRDM4Q9UKN5 801 aa11.64□□□□□ -0.55
PHF1-210ENST00000488767 SPIN1Q9Y657 262 aaPredicted RBP11.64□□□□□ -0.55
PHF1-210ENST00000488767 A0A0G2JPF8 293 aa11.63□□□□□ -0.55
PHF1-210ENST00000488767 HNRNPCL2B2RXH8 293 aa11.63□□□□□ -0.55
PHF1-210ENST00000488767 B4DXG7 233 aa11.63□□□□□ -0.55
PHF1-210ENST00000488767 HNRNPCL3B7ZW38 293 aa11.63□□□□□ -0.55
PHF1-210ENST00000488767 SHISA8B8ZZ34 492 aa11.63□□□□□ -0.55
PHF1-210ENST00000488767 HNRNPCL1O60812 293 aaKnown RBP11.63□□□□□ -0.55
PHF1-210ENST00000488767 SYNGR4O95473 234 aa11.63□□□□□ -0.55
PHF1-210ENST00000488767 CHRM4P08173 479 aa11.63□□□□□ -0.55
PHF1-210ENST00000488767 LINGO3P0C6S8 592 aa11.63□□□□□ -0.55
PHF1-210ENST00000488767 HNRNPCL4P0DMR1 293 aa11.63□□□□□ -0.55
PHF1-210ENST00000488767 BMP2P12643 396 aa11.63□□□□□ -0.55
PHF1-210ENST00000488767 HOXB9P17482 250 aaPredicted RBP11.63□□□□□ -0.55
PHF1-210ENST00000488767 CTSSP25774 331 aa11.63□□□□□ -0.55
PHF1-210ENST00000488767 CEACAM8P31997 349 aaPredicted RBP11.63□□□□□ -0.55
PHF1-210ENST00000488767 EIF1AXP47813 144 aaKnown RBP11.63□□□□□ -0.55
PHF1-210ENST00000488767 MVDP53602 400 aa11.63□□□□□ -0.55
PHF1-210ENST00000488767 FUT5Q11128 374 aa11.63□□□□□ -0.55
PHF1-210ENST00000488767 FOXF1Q12946 379 aa11.63□□□□□ -0.55
PHF1-210ENST00000488767 SELENBP1Q13228 472 aa11.63□□□□□ -0.55
PHF1-210ENST00000488767 SKP2Q13309 424 aa11.63□□□□□ -0.55
PHF1-210ENST00000488767 NFYCQ13952 458 aa11.63□□□□□ -0.55
PHF1-210ENST00000488767 QPRTQ15274 297 aa11.63□□□□□ -0.55
PHF1-210ENST00000488767 TMEM44Q2T9K0 475 aa11.63□□□□□ -0.55
PHF1-210ENST00000488767 GCNT6Q5T4J0 391 aa11.63□□□□□ -0.55
PHF1-210ENST00000488767 PRAMEF8Q5VWM4 474 aa11.63□□□□□ -0.55
PHF1-210ENST00000488767 PRAMEF7Q5VXH5 474 aa11.63□□□□□ -0.55
PHF1-210ENST00000488767 CGB2Q6NT52 195 aa11.63□□□□□ -0.55
PHF1-210ENST00000488767 ESPNLQ6ZVH7 1005 aa11.63□□□□□ -0.55
PHF1-210ENST00000488767 DHDDSQ86SQ9 333 aa11.63□□□□□ -0.55
PHF1-210ENST00000488767 KRT73Q86Y46 540 aa11.63□□□□□ -0.55
PHF1-210ENST00000488767 ZNF440Q8IYI8 595 aa11.63□□□□□ -0.55
PHF1-210ENST00000488767 LILRA2Q8N149 483 aa11.63□□□□□ -0.55
PHF1-210ENST00000488767 DPP10Q8N608 796 aa11.63□□□□□ -0.55
PHF1-210ENST00000488767 METTL25Q8N6Q8 603 aa11.63□□□□□ -0.55
PHF1-210ENST00000488767 TNIP2Q8NFZ5 429 aa11.63□□□□□ -0.55
PHF1-210ENST00000488767 FBXO27Q8NI29 283 aa11.63□□□□□ -0.55
PHF1-210ENST00000488767 BBS10Q8TAM1 723 aa11.63□□□□□ -0.55
PHF1-210ENST00000488767 GPR119Q8TDV5 335 aa11.63□□□□□ -0.55
PHF1-210ENST00000488767 ST8SIA1Q92185 356 aa11.63□□□□□ -0.55
PHF1-210ENST00000488767 TMEM19Q96HH6 336 aa11.63□□□□□ -0.55
PHF1-210ENST00000488767 REXO5Q96IC2 774 aaKnown RBP11.63□□□□□ -0.55
PHF1-210ENST00000488767 UCN2Q96RP3 112 aa11.63□□□□□ -0.55
PHF1-210ENST00000488767 THUMPD3Q9BV44 507 aaKnown RBP11.63□□□□□ -0.55
PHF1-210ENST00000488767 SFXN3Q9BWM7 321 aa11.63□□□□□ -0.55
PHF1-210ENST00000488767 PINK1Q9BXM7 581 aa11.63□□□□□ -0.55
PHF1-210ENST00000488767 SLC38A1Q9H2H9 487 aa11.63□□□□□ -0.55
PHF1-210ENST00000488767 A4GALTQ9NPC4 353 aa11.63□□□□□ -0.55
PHF1-210ENST00000488767 EXOSC3Q9NQT5 275 aaKnown RBP11.63□□□□□ -0.55
PHF1-210ENST00000488767 MCTS1Q9ULC4 181 aaKnown RBP11.63□□□□□ -0.55
PHF1-210ENST00000488767 IFT52Q9Y366 437 aa11.63□□□□□ -0.55
PHF1-210ENST00000488767 ZNF175Q9Y473 711 aa11.63□□□□□ -0.55
PHF1-210ENST00000488767 ICE1Q9Y2F5 2266 aa11.63□□□□□ -0.55
PHF1-210ENST00000488767 BBIP1A8MTZ0 92 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms