RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 FZD5Q13467 585 aa13.23□□□□□ -0.29
RER1-207ENST00000488353 PRAMEF14Q5SWL7 426 aa13.23□□□□□ -0.29
RER1-207ENST00000488353 METTL11BQ5VVY1 283 aa13.23□□□□□ -0.29
RER1-207ENST00000488353 PRAMEF13Q5VWM6 474 aa13.23□□□□□ -0.29
RER1-207ENST00000488353 FAM83HQ6ZRV2 1179 aaPredicted RBP13.23□□□□□ -0.29
RER1-207ENST00000488353 SLC9B2Q86UD5 537 aa13.23□□□□□ -0.29
RER1-207ENST00000488353 ZNF547Q8IVP9 402 aa13.23□□□□□ -0.29
RER1-207ENST00000488353 EXOSC8Q96B26 276 aaKnown RBP13.23□□□□□ -0.29
RER1-207ENST00000488353 DTD2Q96FN9 168 aa13.23□□□□□ -0.29
RER1-207ENST00000488353 AHCYL2Q96HN2 611 aaKnown RBP13.23□□□□□ -0.29
RER1-207ENST00000488353 DPH7Q9BTV6 452 aa13.23□□□□□ -0.29
RER1-207ENST00000488353 JAM3Q9BX67 310 aa13.23□□□□□ -0.29
RER1-207ENST00000488353 TEX12Q9BXU0 123 aa13.23□□□□□ -0.29
RER1-207ENST00000488353 PCYT1BQ9Y5K3 369 aaPredicted RBP13.23□□□□□ -0.29
RER1-207ENST00000488353 A0A0G2JN53 185 aa13.23□□□□□ -0.29
RER1-207ENST00000488353 FEZF1A0PJY2 475 aa13.23□□□□□ -0.29
RER1-207ENST00000488353 POM121CA8CG34 1229 aa13.23□□□□□ -0.29
RER1-207ENST00000488353 MCRIP1C9JLW8 97 aa13.23□□□□□ -0.29
RER1-207ENST00000488353 PGRMC2O15173 223 aa13.23□□□□□ -0.29
RER1-207ENST00000488353 B4GALT2O60909 372 aa13.23□□□□□ -0.29
RER1-207ENST00000488353 PLATP00750 562 aa13.23□□□□□ -0.29
RER1-207ENST00000488353 POU3F2P20265 443 aaPredicted RBP13.23□□□□□ -0.29
RER1-207ENST00000488353 MAOBP27338 520 aa13.23□□□□□ -0.29
RER1-207ENST00000488353 IFNGR2P38484 337 aa13.23□□□□□ -0.29
RER1-207ENST00000488353 HOXA1P49639 335 aaPredicted RBP13.23□□□□□ -0.29
RER1-207ENST00000488353 GPM6BQ13491 265 aa13.23□□□□□ -0.29
RER1-207ENST00000488353 KLF9Q13886 244 aaPredicted RBP13.23□□□□□ -0.29
RER1-207ENST00000488353 CDC73Q6P1J9 531 aa13.23□□□□□ -0.29
RER1-207ENST00000488353 ALKAL2Q6UX46 152 aa13.23□□□□□ -0.29
RER1-207ENST00000488353 C6orf120Q7Z4R8 191 aa13.23□□□□□ -0.29
RER1-207ENST00000488353 CACUL1Q86Y37 369 aa13.23□□□□□ -0.29
RER1-207ENST00000488353 ETFBKMTQ8IXQ9 262 aa13.23□□□□□ -0.29
RER1-207ENST00000488353 SPICQ8N5J4 248 aa13.23□□□□□ -0.29
RER1-207ENST00000488353 TREX2Q9BQ50 279 aaPredicted RBP13.23□□□□□ -0.29
RER1-207ENST00000488353 TMPRSS13Q9BYE2 586 aa13.23□□□□□ -0.29
RER1-207ENST00000488353 BABAM2Q9NXR7 383 aa13.23□□□□□ -0.29
RER1-207ENST00000488353 NFKBIL1Q9UBC1 381 aaPredicted RBP13.23□□□□□ -0.29
RER1-207ENST00000488353 FBXL2Q9UKC9 423 aa13.23□□□□□ -0.29
RER1-207ENST00000488353 DNASE2O00115 360 aaPredicted RBP13.22□□□□□ -0.29
RER1-207ENST00000488353 HMGN4O00479 90 aa13.22□□□□□ -0.29
RER1-207ENST00000488353 RP2O75695 350 aa13.22□□□□□ -0.29
RER1-207ENST00000488353 APOC3P02656 99 aa13.22□□□□□ -0.29
RER1-207ENST00000488353 WNT1P04628 370 aa13.22□□□□□ -0.29
RER1-207ENST00000488353 GIPP09681 153 aaPredicted RBP13.22□□□□□ -0.29
RER1-207ENST00000488353 PTGER1P34995 402 aa13.22□□□□□ -0.29
RER1-207ENST00000488353 RAP2BP61225 183 aa13.22□□□□□ -0.29
RER1-207ENST00000488353 SCRN3Q0VDG4 424 aa13.22□□□□□ -0.29
RER1-207ENST00000488353 CLEC12AQ5QGZ9 265 aa13.22□□□□□ -0.29
RER1-207ENST00000488353 FAM69AQ5T7M9 428 aa13.22□□□□□ -0.29
RER1-207ENST00000488353 Q6ZTK2 550 aa13.22□□□□□ -0.29
RER1-207ENST00000488353 NAXDQ8IW45 347 aa13.22□□□□□ -0.29
RER1-207ENST00000488353 FAM71CQ8NEG0 241 aa13.22□□□□□ -0.29
RER1-207ENST00000488353 GNPDA2Q8TDQ7 276 aa13.22□□□□□ -0.29
RER1-207ENST00000488353 ARRDC3Q96B67 414 aa13.22□□□□□ -0.29
RER1-207ENST00000488353 ZDHHC5Q9C0B5 715 aa13.22□□□□□ -0.29
RER1-207ENST00000488353 ISG20L2Q9H9L3 353 aaKnown RBP13.22□□□□□ -0.29
RER1-207ENST00000488353 CTPS2Q9NRF8 586 aa13.22□□□□□ -0.29
RER1-207ENST00000488353 H2AFY2Q9P0M6 372 aaPredicted RBP13.22□□□□□ -0.29
RER1-207ENST00000488353 CPNE7Q9UBL6 633 aa13.22□□□□□ -0.29
RER1-207ENST00000488353 HEATR5BQ9P2D3 2071 aa13.22□□□□□ -0.29
RER1-207ENST00000488353 PRR23D1E9PI22 279 aaPredicted RBP13.22□□□□□ -0.29
RER1-207ENST00000488353 SELENOFO60613 162 aa13.22□□□□□ -0.29
RER1-207ENST00000488353 TBX6O95947 436 aaPredicted RBP13.22□□□□□ -0.29
RER1-207ENST00000488353 PRR23D2P0DMB1 279 aaPredicted RBP13.22□□□□□ -0.29
RER1-207ENST00000488353 HTR1FP30939 366 aa13.22□□□□□ -0.29
RER1-207ENST00000488353 S100A11P31949 105 aa13.22□□□□□ -0.29
RER1-207ENST00000488353 TSPAN31Q12999 210 aa13.22□□□□□ -0.29
RER1-207ENST00000488353 HLXQ14774 488 aaPredicted RBP13.22□□□□□ -0.29
RER1-207ENST00000488353 SYPL1Q16563 259 aa13.22□□□□□ -0.29
RER1-207ENST00000488353 GAB4Q2WGN9 574 aa13.22□□□□□ -0.29
RER1-207ENST00000488353 C9orf50Q5SZB4 431 aa13.22□□□□□ -0.29
RER1-207ENST00000488353 MEX3DQ86XN8 651 aaKnown RBP13.22□□□□□ -0.29
RER1-207ENST00000488353 PDZD9Q8IXQ8 264 aa13.22□□□□□ -0.29
RER1-207ENST00000488353 ZNF454Q8N9F8 522 aa13.22□□□□□ -0.29
RER1-207ENST00000488353 HAVCR2Q8TDQ0 301 aa13.22□□□□□ -0.29
RER1-207ENST00000488353 OR5P2Q8WZ92 322 aa13.22□□□□□ -0.29
RER1-207ENST00000488353 TM4SF18Q96CE8 201 aa13.22□□□□□ -0.29
RER1-207ENST00000488353 PRRC1Q96M27 445 aa13.22□□□□□ -0.29
RER1-207ENST00000488353 IFT27Q9BW83 186 aa13.22□□□□□ -0.29
RER1-207ENST00000488353 PIPOXQ9P0Z9 390 aa13.22□□□□□ -0.29
RER1-207ENST00000488353 MGAT4CQ9UBM8 478 aa13.22□□□□□ -0.29
RER1-207ENST00000488353 TAC3Q9UHF0 121 aa13.22□□□□□ -0.29
RER1-207ENST00000488353 CA5BQ9Y2D0 317 aa13.22□□□□□ -0.29
RER1-207ENST00000488353 KIF26AQ9ULI4 1882 aaPredicted RBP13.22□□□□□ -0.29
RER1-207ENST00000488353 EYSQ5T1H1 3165 aa13.22□□□□□ -0.29
RER1-207ENST00000488353 ARPC4-TTLL3A0A0A6YYG9 625 aa13.21□□□□□ -0.29
RER1-207ENST00000488353 A0A1B0GUH1 482 aa13.21□□□□□ -0.29
RER1-207ENST00000488353 ANXA2P2A6NMY6 339 aa13.21□□□□□ -0.29
RER1-207ENST00000488353 D6RAR5 112 aa13.21□□□□□ -0.29
RER1-207ENST00000488353 MID1O15344 667 aa13.21□□□□□ -0.29
RER1-207ENST00000488353 CPN1P15169 458 aa13.21□□□□□ -0.29
RER1-207ENST00000488353 SDHBP21912 280 aa13.21□□□□□ -0.29
RER1-207ENST00000488353 ATP5A1P25705 553 aaKnown RBP13.21□□□□□ -0.29
RER1-207ENST00000488353 PSMB5P28074 263 aa13.21□□□□□ -0.29
RER1-207ENST00000488353 MAZP56270 477 aaKnown RBP13.21□□□□□ -0.29
RER1-207ENST00000488353 SFRP5Q5T4F7 317 aa13.21□□□□□ -0.29
RER1-207ENST00000488353 C9orf64Q5T6V5 341 aa13.21□□□□□ -0.29
RER1-207ENST00000488353 ATRAIDQ6UW56 229 aa13.21□□□□□ -0.29
RER1-207ENST00000488353 FAM98AQ8NCA5 519 aaKnown RBP13.21□□□□□ -0.29
RER1-207ENST00000488353 OR11G2Q8NGC1 345 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms