RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 B2RBV5 119 aa10.23□□□□□ -0.77
TRIM56-204ENST00000487252 NPIPA7E9PJI5 369 aa10.23□□□□□ -0.77
TRIM56-204ENST00000487252 ADAMDEC1O15204 470 aa10.23□□□□□ -0.77
TRIM56-204ENST00000487252 GYG2O15488 501 aa10.23□□□□□ -0.77
TRIM56-204ENST00000487252 NPIPA8P0DM63 369 aa10.23□□□□□ -0.77
TRIM56-204ENST00000487252 TLX1P31314 330 aaPredicted RBP10.23□□□□□ -0.77
TRIM56-204ENST00000487252 BUD31P41223 144 aaPredicted RBP10.23□□□□□ -0.77
TRIM56-204ENST00000487252 CASP2P42575 452 aa10.23□□□□□ -0.77
TRIM56-204ENST00000487252 EIF1AXP47813 144 aaKnown RBP10.23□□□□□ -0.77
TRIM56-204ENST00000487252 ALDH18A1P54886 795 aaKnown RBP10.23□□□□□ -0.77
TRIM56-204ENST00000487252 IL13RA1P78552 427 aa10.23□□□□□ -0.77
TRIM56-204ENST00000487252 CARTPTQ16568 116 aa10.23□□□□□ -0.77
TRIM56-204ENST00000487252 AP5B1Q2VPB7 878 aa10.23□□□□□ -0.77
TRIM56-204ENST00000487252 SHQ1Q6PI26 577 aaKnown RBP10.23□□□□□ -0.77
TRIM56-204ENST00000487252 THSD4Q6ZMP0 1018 aa10.23□□□□□ -0.77
TRIM56-204ENST00000487252 RAPH1Q70E73 1250 aa10.23□□□□□ -0.77
TRIM56-204ENST00000487252 NUFIP2Q7Z417 695 aaKnown RBP10.23□□□□□ -0.77
TRIM56-204ENST00000487252 GALNT10Q86SR1 603 aa10.23□□□□□ -0.77
TRIM56-204ENST00000487252 ARHGAP24Q8N264 748 aa10.23□□□□□ -0.77
TRIM56-204ENST00000487252 SYT14Q8NB59 555 aa10.23□□□□□ -0.77
TRIM56-204ENST00000487252 OR4K17Q8NGC6 315 aa10.23□□□□□ -0.77
TRIM56-204ENST00000487252 OR5M1Q8NGP8 315 aa10.23□□□□□ -0.77
TRIM56-204ENST00000487252 TMEM186Q96B77 213 aa10.23□□□□□ -0.77
TRIM56-204ENST00000487252 MUCL1Q96DR8 90 aa10.23□□□□□ -0.77
TRIM56-204ENST00000487252 TSPAN17Q96FV3 270 aa10.23□□□□□ -0.77
TRIM56-204ENST00000487252 UBXN10Q96LJ8 280 aa10.23□□□□□ -0.77
TRIM56-204ENST00000487252 COL21A1Q96P44 957 aa10.23□□□□□ -0.77
TRIM56-204ENST00000487252 SNX18Q96RF0 628 aa10.23□□□□□ -0.77
TRIM56-204ENST00000487252 SLC6A7Q99884 636 aa10.23□□□□□ -0.77
TRIM56-204ENST00000487252 MRPL57Q9BQC6 102 aaKnown RBP10.23□□□□□ -0.77
TRIM56-204ENST00000487252 ITPAQ9BY32 194 aa10.23□□□□□ -0.77
TRIM56-204ENST00000487252 KRTAP3-3Q9BYR6 98 aa10.23□□□□□ -0.77
TRIM56-204ENST00000487252 KRTAP3-2Q9BYR7 98 aa10.23□□□□□ -0.77
TRIM56-204ENST00000487252 MRPL46Q9H2W6 279 aaKnown RBP10.23□□□□□ -0.77
TRIM56-204ENST00000487252 HEATR1Q9H583 2144 aaKnown RBP10.23□□□□□ -0.77
TRIM56-204ENST00000487252 RNPEPL1Q9HAU8 725 aa10.23□□□□□ -0.77
TRIM56-204ENST00000487252 TAS2R13Q9NYV9 303 aa10.23□□□□□ -0.77
TRIM56-204ENST00000487252 PDP1Q9P0J1 537 aaPredicted RBP10.23□□□□□ -0.77
TRIM56-204ENST00000487252 PHF11Q9UIL8 331 aa10.23□□□□□ -0.77
TRIM56-204ENST00000487252 MCTS1Q9ULC4 181 aaKnown RBP10.23□□□□□ -0.77
TRIM56-204ENST00000487252 LOC100653049A0A140TA62 436 aa10.22□□□□□ -0.77
TRIM56-204ENST00000487252 PIN1P1O15428 100 aa10.22□□□□□ -0.77
TRIM56-204ENST00000487252 KRT34O76011 436 aa10.22□□□□□ -0.77
TRIM56-204ENST00000487252 AVPP01185 164 aa10.22□□□□□ -0.77
TRIM56-204ENST00000487252 ENO1P06733 434 aaKnown RBP10.22□□□□□ -0.77
TRIM56-204ENST00000487252 PGCP20142 388 aa10.22□□□□□ -0.77
TRIM56-204ENST00000487252 CD22P20273 847 aa10.22□□□□□ -0.77
TRIM56-204ENST00000487252 DRD5P21918 477 aa10.22□□□□□ -0.77
TRIM56-204ENST00000487252 KHKP50053 298 aa10.22□□□□□ -0.77
TRIM56-204ENST00000487252 RPL14P50914 215 aaKnown RBP10.22□□□□□ -0.77
TRIM56-204ENST00000487252 CDKN2DP55273 166 aa10.22□□□□□ -0.77
TRIM56-204ENST00000487252 CDKL1Q00532 357 aa10.22□□□□□ -0.77
TRIM56-204ENST00000487252 DNAL1Q4LDG9 190 aa10.22□□□□□ -0.77
TRIM56-204ENST00000487252 VAX1Q5SQQ9 334 aa10.22□□□□□ -0.77
TRIM56-204ENST00000487252 RBM20Q5T481 1227 aaKnown RBP10.22□□□□□ -0.77
TRIM56-204ENST00000487252 OR4C11Q6IEV9 310 aa10.22□□□□□ -0.77
TRIM56-204ENST00000487252 MRM1Q6IN84 353 aaKnown RBP10.22□□□□□ -0.77
TRIM56-204ENST00000487252 Q6ZT83 130 aa10.22□□□□□ -0.77
TRIM56-204ENST00000487252 C1QL4Q86Z23 238 aa10.22□□□□□ -0.77
TRIM56-204ENST00000487252 ZCCHC7Q8N3Z6 543 aaKnown RBP10.22□□□□□ -0.77
TRIM56-204ENST00000487252 ZNF781Q8N8C0 355 aa10.22□□□□□ -0.77
TRIM56-204ENST00000487252 RBM15BQ8NDT2 890 aaKnown RBP10.22□□□□□ -0.77
TRIM56-204ENST00000487252 ANKRD27Q96NW4 1050 aa10.22□□□□□ -0.77
TRIM56-204ENST00000487252 CCDC28BQ9BUN5 200 aa10.22□□□□□ -0.77
TRIM56-204ENST00000487252 SORBS1Q9BX66 1292 aaKnown RBP10.22□□□□□ -0.77
TRIM56-204ENST00000487252 DSN1Q9H410 356 aa10.22□□□□□ -0.77
TRIM56-204ENST00000487252 POPDC3Q9HBV1 291 aa10.22□□□□□ -0.77
TRIM56-204ENST00000487252 DDX28Q9NUL7 540 aaKnown RBP10.22□□□□□ -0.77
TRIM56-204ENST00000487252 NOP53Q9NZM5 478 aaKnown RBP10.22□□□□□ -0.77
TRIM56-204ENST00000487252 GRIP1Q9Y3R0 1128 aa10.22□□□□□ -0.77
TRIM56-204ENST00000487252 A0A1W2PR48 441 aa10.21□□□□□ -0.77
TRIM56-204ENST00000487252 OR5H1A6NKK0 313 aa10.21□□□□□ -0.77
TRIM56-204ENST00000487252 EIF1AYO14602 144 aaKnown RBP10.21□□□□□ -0.77
TRIM56-204ENST00000487252 SLC22A2O15244 555 aa10.21□□□□□ -0.77
TRIM56-204ENST00000487252 HDAC3O15379 428 aa10.21□□□□□ -0.77
TRIM56-204ENST00000487252 TSPAN2O60636 221 aa10.21□□□□□ -0.77
TRIM56-204ENST00000487252 EEDO75530 441 aaKnown RBP10.21□□□□□ -0.77
TRIM56-204ENST00000487252 LYZL6O75951 148 aa10.21□□□□□ -0.77
TRIM56-204ENST00000487252 RBP1P09455 135 aa10.21□□□□□ -0.77
TRIM56-204ENST00000487252 LTA4HP09960 611 aaKnown RBP10.21□□□□□ -0.77
TRIM56-204ENST00000487252 COX5AP20674 150 aa10.21□□□□□ -0.77
TRIM56-204ENST00000487252 ATP5F1P24539 256 aaPredicted RBP10.21□□□□□ -0.77
TRIM56-204ENST00000487252 PGM1P36871 562 aa10.21□□□□□ -0.77
TRIM56-204ENST00000487252 GDF5P43026 501 aa10.21□□□□□ -0.77
TRIM56-204ENST00000487252 SSR2P43308 183 aa10.21□□□□□ -0.77
TRIM56-204ENST00000487252 PPICP45877 212 aa10.21□□□□□ -0.77
TRIM56-204ENST00000487252 IL2P60568 153 aa10.21□□□□□ -0.77
TRIM56-204ENST00000487252 MGAT2Q10469 447 aa10.21□□□□□ -0.77
TRIM56-204ENST00000487252 RIN1Q13671 783 aa10.21□□□□□ -0.77
TRIM56-204ENST00000487252 E2F2Q14209 437 aa10.21□□□□□ -0.77
TRIM56-204ENST00000487252 TRIP10Q15642 601 aa10.21□□□□□ -0.77
TRIM56-204ENST00000487252 STK11Q15831 433 aa10.21□□□□□ -0.77
TRIM56-204ENST00000487252 ARL13AQ5H913 290 aaPredicted RBP10.21□□□□□ -0.77
TRIM56-204ENST00000487252 TECRLQ5HYJ1 363 aa10.21□□□□□ -0.77
TRIM56-204ENST00000487252 GTF2IRD2BQ6EKJ0 949 aa10.21□□□□□ -0.77
TRIM56-204ENST00000487252 NET1Q7Z628 596 aaPredicted RBP10.21□□□□□ -0.77
TRIM56-204ENST00000487252 GTF2IRD2Q86UP8 949 aa10.21□□□□□ -0.77
TRIM56-204ENST00000487252 TEX29Q8N6K0 151 aa10.21□□□□□ -0.77
TRIM56-204ENST00000487252 FBXO27Q8NI29 283 aa10.21□□□□□ -0.77
TRIM56-204ENST00000487252 TMBIM1Q969X1 311 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms