RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 VPS29Q9UBQ0 182 aa5.72□□□□□ -1.49
RTFDC1-209ENST00000487211 NXT1Q9UKK6 140 aaKnown RBP5.72□□□□□ -1.49
RTFDC1-209ENST00000487211 UTS2RQ9UKP6 389 aa5.72□□□□□ -1.49
RTFDC1-209ENST00000487211 FBXW2Q9UKT8 454 aa5.72□□□□□ -1.49
RTFDC1-209ENST00000487211 LAMP3Q9UQV4 416 aa5.72□□□□□ -1.49
RTFDC1-209ENST00000487211 ATG4BQ9Y4P1 393 aa5.72□□□□□ -1.49
RTFDC1-209ENST00000487211 ASB4Q9Y574 426 aa5.72□□□□□ -1.49
RTFDC1-209ENST00000487211 CLDN16Q9Y5I7 305 aa5.72□□□□□ -1.49
RTFDC1-209ENST00000487211 DNAJC15Q9Y5T4 150 aa5.72□□□□□ -1.49
RTFDC1-209ENST00000487211 PTGDR2Q9Y5Y4 395 aa5.72□□□□□ -1.49
RTFDC1-209ENST00000487211 HS3ST3B1Q9Y662 390 aa5.72□□□□□ -1.49
RTFDC1-209ENST00000487211 PCSK5Q92824 1860 aa5.72□□□□□ -1.49
RTFDC1-209ENST00000487211 BSNQ9UPA5 3926 aa5.71□□□□□ -1.49
RTFDC1-209ENST00000487211 SCN2AQ99250 2005 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 A0A0A0MQY5 61 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 A0A0A6YYD5 115 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 ARGFXA6NJG6 315 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 K7EM74 188 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 AZIN1O14977 448 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 PGRMC2O15173 223 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 ALOX12BO75342 701 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 PRKRAO75569 313 aaKnown RBP5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 SCELO95171 688 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 DDAH2O95865 285 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 ADAP00813 363 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 IL1AP01583 271 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 KRT6AP02538 564 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 KRT6BP04259 564 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 SERPINE1P05121 402 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 HEXBP07686 556 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 FHP07954 510 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 FAM58BPP0C7Q3 252 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 LINC00032P0C843 101 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 UROSP10746 265 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 RNH1P13489 461 aaKnown RBP5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 COX7A2P14406 83 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 MAOAP21397 527 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 IL10P22301 178 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 HPDP32754 393 aaPredicted RBP5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 SERPINB5P36952 375 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 SSR2P43308 183 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 SLC1A6P48664 564 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 KRT6CP48668 564 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 HMGA2P52926 109 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 ARFIP1P53367 373 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 HNRNPH2P55795 449 aaKnown RBP5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 RAB38P57729 211 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 ABCE1P61221 599 aaKnown RBP5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 EFNB1P98172 346 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 ZNF33BQ06732 778 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 Q0VFX4 171 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 PMPCAQ10713 525 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 ASPHQ12797 758 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 CHAF1BQ13112 559 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 KIAA0040Q15053 153 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 HHATQ5VTY9 493 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 C18orf63Q68DL7 685 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 NIPAL1Q6NVV3 410 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 LANCL3Q6ZV70 420 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 ANKRD37Q7Z713 158 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 OR4N5Q8IXE1 308 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 CLYBLQ8N0X4 340 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 ZCCHC7Q8N3Z6 543 aaKnown RBP5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 C1orf52Q8N6N3 182 aaKnown RBP5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 OR2T11Q8NH01 316 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 AGR3Q8TD06 166 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 FAR1Q8WVX9 515 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 TSLPQ969D9 159 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 ANKRD9Q96BM1 317 aaPredicted RBP5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 TM4SF18Q96CE8 201 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 IMMP1LQ96LU5 166 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 C3orf30Q96M34 536 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 OR1F2PQ96R84 312 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 SORT1Q99523 831 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 WDR77Q9BQA1 342 aaPredicted RBP5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 TRMOQ9BU70 441 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 QTRT1Q9BXR0 403 aaKnown RBP5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 SEMA4CQ9C0C4 833 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 ING2Q9H160 280 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 CXorf56Q9H5V9 222 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 LYRM4Q9HD34 91 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 PAPOLBQ9NRJ5 636 aaKnown RBP5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 C14orf105Q9NVL8 296 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 TMEM45AQ9NWC5 275 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 TAS2R10Q9NYW0 307 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 STK38LQ9Y2H1 464 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 PADI2Q9Y2J8 665 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 FIS1Q9Y3D6 152 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 MED13Q9UHV7 2174 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 NBASA2RRP1 2371 aa5.71□□□□□ -1.5
RTFDC1-209ENST00000487211 PKD1L1Q8TDX9 2849 aa5.7□□□□□ -1.5
RTFDC1-209ENST00000487211 A0A087X0M5 115 aa5.7□□□□□ -1.5
RTFDC1-209ENST00000487211 LOC102723996A0A087X1L8 192 aa5.7□□□□□ -1.5
RTFDC1-209ENST00000487211 IGKV3D-11A0A0A0MRZ8 115 aa5.7□□□□□ -1.5
RTFDC1-209ENST00000487211 IGHV1-45A0A0A0MS14 117 aa5.7□□□□□ -1.5
RTFDC1-209ENST00000487211 TEX13CA0A0J9YWL9 993 aa5.7□□□□□ -1.5
RTFDC1-209ENST00000487211 A0A1B0GX30 115 aa5.7□□□□□ -1.5
RTFDC1-209ENST00000487211 ARHGAP10A1A4S6 786 aa5.7□□□□□ -1.5
RTFDC1-209ENST00000487211 WIPF3A6NGB9 483 aa5.7□□□□□ -1.5
RTFDC1-209ENST00000487211 GLOD5A6NK44 160 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms