RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 NNATQ16517 81 aa18.78■□□□□ 0.6
HPS3-206ENST00000486530 SNAP47Q5SQN1 464 aa18.78■□□□□ 0.6
HPS3-206ENST00000486530 WDR74Q6RFH5 385 aaPredicted RBP18.78■□□□□ 0.6
HPS3-206ENST00000486530 QSOX2Q6ZRP7 698 aa18.78■□□□□ 0.6
HPS3-206ENST00000486530 BMP8AQ7Z5Y6 402 aa18.78■□□□□ 0.6
HPS3-206ENST00000486530 GPR135Q8IZ08 494 aa18.78■□□□□ 0.6
HPS3-206ENST00000486530 TMCO5AQ8N6Q1 288 aa18.78■□□□□ 0.6
HPS3-206ENST00000486530 GRHL3Q8TE85 626 aa18.78■□□□□ 0.6
HPS3-206ENST00000486530 HSPBAP1Q96EW2 488 aa18.78■□□□□ 0.6
HPS3-206ENST00000486530 CENPOQ9BU64 300 aa18.78■□□□□ 0.6
HPS3-206ENST00000486530 UBQLN3Q9H347 655 aa18.78■□□□□ 0.6
HPS3-206ENST00000486530 CHCHD3Q9NX63 227 aaKnown RBP18.78■□□□□ 0.6
HPS3-206ENST00000486530 FLRT3Q9NZU0 649 aa18.78■□□□□ 0.6
HPS3-206ENST00000486530 EXOSC1Q9Y3B2 195 aaKnown RBP18.78■□□□□ 0.6
HPS3-206ENST00000486530 A3GALT2U3KPV4 340 aa18.78■□□□□ 0.6
HPS3-206ENST00000486530 SDK1Q7Z5N4 2213 aa18.78■□□□□ 0.6
HPS3-206ENST00000486530 KPNA4O00629 521 aaPredicted RBP18.77■□□□□ 0.6
HPS3-206ENST00000486530 DYRK3O43781 588 aa18.77■□□□□ 0.6
HPS3-206ENST00000486530 RCBTB2O95199 551 aa18.77■□□□□ 0.6
HPS3-206ENST00000486530 HBQ1P09105 142 aa18.77■□□□□ 0.6
HPS3-206ENST00000486530 ZGLP1P0C6A0 271 aa18.77■□□□□ 0.6
HPS3-206ENST00000486530 BMP7P18075 431 aa18.77■□□□□ 0.6
HPS3-206ENST00000486530 IDUAP35475 653 aa18.77■□□□□ 0.6
HPS3-206ENST00000486530 ETV5P41161 510 aa18.77■□□□□ 0.6
HPS3-206ENST00000486530 ETV1P50549 477 aa18.77■□□□□ 0.6
HPS3-206ENST00000486530 NXNL2Q5VZ03 156 aa18.77■□□□□ 0.6
HPS3-206ENST00000486530 HSDL2Q6YN16 418 aa18.77■□□□□ 0.6
HPS3-206ENST00000486530 MCFD2Q8NI22 146 aa18.77■□□□□ 0.6
HPS3-206ENST00000486530 NDC1Q9BTX1 674 aa18.77■□□□□ 0.6
HPS3-206ENST00000486530 ZNF426Q9BUY5 554 aa18.77■□□□□ 0.6
HPS3-206ENST00000486530 MMP27Q9H306 513 aa18.77■□□□□ 0.6
HPS3-206ENST00000486530 ATP13A2Q9NQ11 1180 aa18.77■□□□□ 0.6
HPS3-206ENST00000486530 TNRC6BQ9UPQ9 1833 aaKnown RBP18.77■□□□□ 0.6
HPS3-206ENST00000486530 TMEM129A0AVI4 362 aa18.77■□□□□ 0.6
HPS3-206ENST00000486530 LAMTOR5O43504 91 aa18.77■□□□□ 0.6
HPS3-206ENST00000486530 DSG2Q14126 1118 aa18.77■□□□□ 0.6
HPS3-206ENST00000486530 ZNF404Q494X3 552 aa18.77■□□□□ 0.6
HPS3-206ENST00000486530 PAQR6Q6TCH4 344 aa18.77■□□□□ 0.6
HPS3-206ENST00000486530 GDPGP1Q6ZNW5 385 aa18.77■□□□□ 0.6
HPS3-206ENST00000486530 OR9Q1Q8NGQ5 310 aa18.77■□□□□ 0.6
HPS3-206ENST00000486530 PTPMT1Q8WUK0 201 aaPredicted RBP18.77■□□□□ 0.6
HPS3-206ENST00000486530 OIT3Q8WWZ8 545 aa18.77■□□□□ 0.6
HPS3-206ENST00000486530 SENP5Q96HI0 755 aaPredicted RBP18.77■□□□□ 0.6
HPS3-206ENST00000486530 PNO1Q9NRX1 252 aaKnown RBP18.77■□□□□ 0.6
HPS3-206ENST00000486530 NDUFB11Q9NX14 153 aa18.77■□□□□ 0.6
HPS3-206ENST00000486530 DHCR7Q9UBM7 475 aaKnown RBP18.77■□□□□ 0.6
HPS3-206ENST00000486530 IL20RAQ9UHF4 553 aa18.77■□□□□ 0.6
HPS3-206ENST00000486530 PILRBQ9UKJ0 227 aa18.77■□□□□ 0.6
HPS3-206ENST00000486530 UNC13CQ8NB66 2214 aa18.77■□□□□ 0.59
HPS3-206ENST00000486530 IGKV3D-11A0A0A0MRZ8 115 aa18.76■□□□□ 0.59
HPS3-206ENST00000486530 METTL15A6NJ78 407 aa18.76■□□□□ 0.59
HPS3-206ENST00000486530 EFCAB7A8K855 629 aa18.76■□□□□ 0.59
HPS3-206ENST00000486530 ADAM11O75078 769 aa18.76■□□□□ 0.59
HPS3-206ENST00000486530 FOLR1P15328 257 aa18.76■□□□□ 0.59
HPS3-206ENST00000486530 TBXA2RP21731 343 aa18.76■□□□□ 0.59
HPS3-206ENST00000486530 SOX3P41225 446 aa18.76■□□□□ 0.59
HPS3-206ENST00000486530 FXYD6P3P58550 94 aa18.76■□□□□ 0.59
HPS3-206ENST00000486530 CSTF1Q05048 431 aaKnown RBP18.76■□□□□ 0.59
HPS3-206ENST00000486530 ALG10BQ5I7T1 473 aa18.76■□□□□ 0.59
HPS3-206ENST00000486530 YOD1Q5VVQ6 348 aaPredicted RBP18.76■□□□□ 0.59
HPS3-206ENST00000486530 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.76■□□□□ 0.59
HPS3-206ENST00000486530 FN3KQ9H479 309 aa18.76■□□□□ 0.59
HPS3-206ENST00000486530 MEPEQ9NQ76 525 aaPredicted RBP18.76■□□□□ 0.59
HPS3-206ENST00000486530 SEC14L4Q9UDX3 406 aa18.76■□□□□ 0.59
HPS3-206ENST00000486530 CFL2Q9Y281 166 aa18.76■□□□□ 0.59
HPS3-206ENST00000486530 CACNA1EQ15878 2313 aa18.76■□□□□ 0.59
HPS3-206ENST00000486530 ASXL3Q9C0F0 2248 aa18.75■□□□□ 0.59
HPS3-206ENST00000486530 SERINC4A6NH21 518 aa18.75■□□□□ 0.59
HPS3-206ENST00000486530 BHLHE40O14503 412 aa18.75■□□□□ 0.59
HPS3-206ENST00000486530 DSCR3O14972 297 aa18.75■□□□□ 0.59
HPS3-206ENST00000486530 POLR1CO15160 346 aaPredicted RBP18.75■□□□□ 0.59
HPS3-206ENST00000486530 SAGP10523 405 aaPredicted RBP18.75■□□□□ 0.59
HPS3-206ENST00000486530 FBLP22087 321 aaKnown RBP18.75■□□□□ 0.59
HPS3-206ENST00000486530 HTR1FP30939 366 aa18.75■□□□□ 0.59
HPS3-206ENST00000486530 WNT4P56705 351 aa18.75■□□□□ 0.59
HPS3-206ENST00000486530 SLC37A1P57057 533 aa18.75■□□□□ 0.59
HPS3-206ENST00000486530 SOWAHCQ53LP3 525 aaPredicted RBP18.75■□□□□ 0.59
HPS3-206ENST00000486530 ULK3Q6PHR2 472 aa18.75■□□□□ 0.59
HPS3-206ENST00000486530 IGFN1Q86VF2 1251 aa18.75■□□□□ 0.59
HPS3-206ENST00000486530 GID4Q8IVV7 300 aa18.75■□□□□ 0.59
HPS3-206ENST00000486530 C1orf210Q8IVY1 113 aa18.75■□□□□ 0.59
HPS3-206ENST00000486530 ARSGQ96EG1 525 aa18.75■□□□□ 0.59
HPS3-206ENST00000486530 SLC46A1Q96NT5 459 aa18.75■□□□□ 0.59
HPS3-206ENST00000486530 ZNF768Q9H5H4 540 aaKnown RBP18.75■□□□□ 0.59
HPS3-206ENST00000486530 RNF167Q9H6Y7 350 aa18.75■□□□□ 0.59
HPS3-206ENST00000486530 RPS6KB2Q9UBS0 482 aa18.75■□□□□ 0.59
HPS3-206ENST00000486530 SERTAD3Q9UJW9 196 aa18.75■□□□□ 0.59
HPS3-206ENST00000486530 SIGLEC7Q9Y286 467 aa18.75■□□□□ 0.59
HPS3-206ENST00000486530 SLC35A3Q9Y2D2 325 aa18.75■□□□□ 0.59
HPS3-206ENST00000486530 ARID1BQ8NFD5 2236 aaPredicted RBP18.75■□□□□ 0.59
HPS3-206ENST00000486530 HCN1O60741 890 aa18.75■□□□□ 0.59
HPS3-206ENST00000486530 CSTAP01040 98 aa18.75■□□□□ 0.59
HPS3-206ENST00000486530 ZNF12P17014 697 aa18.75■□□□□ 0.59
HPS3-206ENST00000486530 FUT1P19526 365 aa18.75■□□□□ 0.59
HPS3-206ENST00000486530 PSMA1P25786 263 aaKnown RBP18.75■□□□□ 0.59
HPS3-206ENST00000486530 C11orf91Q3C1V1 193 aa18.75■□□□□ 0.59
HPS3-206ENST00000486530 PLK5Q496M5 336 aa18.75■□□□□ 0.59
HPS3-206ENST00000486530 SMARCD3Q6STE5 483 aa18.75■□□□□ 0.59
HPS3-206ENST00000486530 TMEM151BQ8IW70 566 aa18.75■□□□□ 0.59
HPS3-206ENST00000486530 LNX2Q8N448 690 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms